Silurus meridionalis (southern catfish): 124398889
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Entry
124398889 CDS
T08004
Symbol
abcg2a
Name
(RefSeq) broad substrate specificity ATP-binding cassette transporter ABCG2
KO
K05681
ATP-binding cassette, subfamily G (WHITE), member 2
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo02010
ABC transporters
smeo04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
124398889 (abcg2a)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
124398889 (abcg2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smeo02000
]
124398889 (abcg2a)
04147 Exosome [BR:
smeo04147
]
124398889 (abcg2a)
04090 CD molecules [BR:
smeo04090
]
124398889 (abcg2a)
Transporters [BR:
smeo02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
124398889 (abcg2a)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of breast milk
124398889 (abcg2a)
CD molecules [BR:
smeo04090
]
Proteins
124398889 (abcg2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
ABC2_membrane_7
AAA_21
SMC_N
AAA_23
DUF87
ABC2_membrane_3
AAA_29
FtsK_SpoIIIE
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
124398889
NCBI-ProteinID:
XP_046725322
LinkDB
All DBs
Position
16:14679675..14697887
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AA seq
636 aa
AA seq
DB search
MDGTKKGGHGATVSFHNIHYSVTCRTGILCKQKKTHKDILIDLNGIMKPGLNAILGATGS
GKSSFLDVLAARKDPKGLTGEVLIDGAPQPPNFKCLSGYVVQDDVVMGTLTVRENLRFSA
ALRLPTSISQKEKEEKVQRLIDELGLTKVADSRVGTQLIRGISGGERKRTNIGMELIIDP
SVLFLDEPTTGLDANTANSVLSLLKRMSAHGRTIILSIHQPRYSIYRLFDSLTLLAAGRQ
VYHGPAQSALQYFSDIGFSCEPHNNPADFFLDVINGDYTALSQDKLEDNAEPDQKQSAPD
RQPIEDRLVQEYKQWSHYKQTKDELEEITQGRNYDNRPKSRTVTYSTSFGHQFKWVLKRT
FRNLMLNPQTSFAQVGVTLFLALIVGAIFFSVPNNSSGIQNRMGALFFITTNQCFGSLSS
AELFITERKLFLHEYVSGYYRVSVYFLCKLLSDILTLRTVPAIIFSSVAYWMIGFKVDTG
SFFFFMFTVAMTAYTATSMVMAISADQNVVAIANIYMTISFVFMMIFSGLLVNLPSIADW
LNWLKYFSIPRYGLTGLLVNEFVGLEFCDPPTTLPPHFNITIGTNSSCTTGERFLTAQGI
DYSTWGMWQNIVALGCMIVIFLSIAYLKLRLIKKFT
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggatggtacgaagaaaggaggccatggggctacagtgagcttccacaacatccactac
agcgtcacctgccggactgggatactctgcaaacagaagaagacccacaaagacatcctc
attgacctcaatggaataatgaagcctggactgaacgccatactgggggccacaggcagc
gggaaatcctcttttttggatgtgctagcggcgaggaaggatcccaaaggactgactgga
gaggtgctgatagatggagcaccacagccgcccaactttaaatgtctgtctggatatgta
gtacaggacgatgtggtgatgggaactctgaccgtgagagagaatctacgcttctcggca
gctttaaggcttccgacatctatcagtcagaaggagaaggaggagaaagtgcagcgactg
attgatgagctcgggctgactaaagtagctgactcacgggtgggcacccaactgattcgt
ggaatttcgggaggtgagagaaagaggaccaacatcggcatggagctcatcatcgatccg
tctgtccttttcttggatgagccaacgaccggtctggatgctaacacggctaactctgta
ctatccctattaaagaggatgtctgctcacggccggaccatcatcctgtctattcaccag
ccacgctactccatttaccggctgttcgattccctcaccctgctggcggcaggaaggcag
gtttaccatgggcctgctcagagtgcactgcagtacttcagtgacatcggcttcagctgt
gaacctcataacaaccccgctgacttcttcctggatgtcattaatggagattatactgcg
ctgtctcaagacaaactggaggataatgcagaaccggatcagaagcagagcgcaccggac
cgtcagcccatcgaggaccgtctggtgcaggagtacaagcagtggtcgcactacaagcag
accaaagacgagctggaggagatcactcagggccggaattacgacaaccggcccaaatcc
cgcaccgtcacctacagcacgtctttcggccaccagttcaaatgggtgttgaagaggacg
ttccgcaacctgatgctcaatccacagacctccttcgctcaggtcggcgtgactcttttc
ttagctctgatcgtcggcgccatctttttcagcgtgccaaacaattcaagtggaatccag
aacagaatgggcgccttgttcttcatcaccaccaaccagtgtttcggctcgctgtcctct
gctgaactcttcatcacagagcgcaagctcttcctacacgagtatgttagtggttattac
agagtgtcggtgtacttcctgtgtaagctgctctcggatattctcaccctgcgcacagtt
ccagccatcatcttcagctcggtggcctactggatgatcgggttcaaagtggatacagga
tcgttttttttcttcatgttcactgttgccatgaccgcgtacaccgcgacatccatggtg
atggccatttcggccgatcagaacgtggtggccatcgccaacatctacatgaccatcagc
tttgtgttcatgatgattttctcaggcttgttggtgaatttgccgagcattgctgactgg
ctaaactggctaaaatacttcagcattccccgctatggccttacgggtctcctggtgaac
gagtttgttgggctggaattctgtgaccctccaacaactctgcctcctcacttcaatatc
actataggaaccaattccagctgtacgaccggagagagatttctgacggcgcagggcatt
gactattccacctggggcatgtggcagaatatcgtggctctgggctgcatgatcgtcatc
ttcctgagtatcgcatacctcaaactgcgcttaattaagaaattcacatag
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