Silurus meridionalis (southern catfish): 124398902
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Entry
124398902 CDS
T08004
Symbol
tuba1c
Name
(RefSeq) tubulin alpha-1C chain
KO
K07374
tubulin alpha
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04145
Phagosome
smeo04210
Apoptosis
smeo04517
IgSF CAM signaling
smeo04530
Tight junction
smeo04540
Gap junction
smeo04814
Motor proteins
smeo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
124398902 (tuba1c)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124398902 (tuba1c)
09143 Cell growth and death
04210 Apoptosis
124398902 (tuba1c)
09144 Cellular community - eukaryotes
04530 Tight junction
124398902 (tuba1c)
04540 Gap junction
124398902 (tuba1c)
09142 Cell motility
04814 Motor proteins
124398902 (tuba1c)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
124398902 (tuba1c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124398902 (tuba1c)
03036 Chromosome and associated proteins [BR:
smeo03036
]
124398902 (tuba1c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smeo04812
]
124398902 (tuba1c)
04147 Exosome [BR:
smeo04147
]
124398902 (tuba1c)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124398902 (tuba1c)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
124398902 (tuba1c)
Cytoskeleton proteins [BR:
smeo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
124398902 (tuba1c)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124398902 (tuba1c)
Exosomal proteins of other body fluids (saliva and urine)
124398902 (tuba1c)
Exosomal proteins of colorectal cancer cells
124398902 (tuba1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
124398902
NCBI-ProteinID:
XP_046725347
LinkDB
All DBs
Position
16:complement(13218437..13221659)
Genome browser
AA seq
451 aa
AA seq
DB search
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSIEGEGEEEGEEY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgcatctctatccacgtgggtcaggctggtgtccagattggcaatgcctgc
tgggaactttactgtctcgaacacggcatccagccggacggacagatgccgagcgacaag
accattggaggtggagatgattccttcaacacattctttagcgagactggagctggaaag
cacgttcctagggcagtttttgtggatctggagcccactgttatagatgaggttcgcact
ggaacgtatcgtcagctgttccaccctgagcagctcatcacaggaaaggaggacgctgca
aacaactacgctcgtggtcactacaccattggcaaggaaattattgatctggttttggac
agaatccgcaagctggctgaccagtgcacaggtctgcagggtttcctggtcttccacagc
tttggtggtggaaccggatctggtttcacctccctgctgatggaacgcctgtccgttgac
tacggtaagaagtccaagctggagttctccatctacccagctccccaggtttctactgct
gtggtggagccctacaactccatcctgaccacccacaccactctagagcactctgactgt
gccttcatggttgataatgaagccatctatgacatttgccgtaggaacctcgatattgag
cgtccttcttacaccaacctgaataggcttattagtcagattgtgtcctccatcactgcc
tcactccgtttcgatggtgccctcaatgtcgaccttactgaattccagaccaacttggtg
ccctatccccgtattcatttcccactggccacctatgctccagtgatctctgcagagaag
gcctaccatgagcagctctctgtgtctgaaatcacaaacgcatgctttgagccggccaat
cagatggtgaaatgtgacccacgtcacggcaagtacatggcctgctgcctgctgtaccgt
ggtgatgtggtgcctaaagatgtgaacgctgctatcgccaccatcaagaccaagcgttcc
atccagtttgtggactggtgtcccactgggttcaaggtgggtatcaactaccagcctccc
actgtggttccaggtggagacctggccaaggtgcagagggctgtgtgcatgttgagcaac
accacggccattgccgaagcctgggctcgtctcgatcacaagtttgatctgatgtacgcc
aagcgtgccttcgtgcactggtatgtcggtgagggcatggaagagggtgagttctcagag
gcccgtgaggacatggctgccctggagaaggattatgaagaggtcggtgttgactccatt
gaaggtgagggagaggaagaaggagaggagtattag
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