KEGG   Silurus meridionalis (southern catfish): 124398902
Entry
124398902         CDS       T08004                                 
Symbol
tuba1c
Name
(RefSeq) tubulin alpha-1C chain
  KO
K07374  tubulin alpha
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo04145  Phagosome
smeo04210  Apoptosis
smeo04517  IgSF CAM signaling
smeo04530  Tight junction
smeo04540  Gap junction
smeo04814  Motor proteins
smeo05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    124398902 (tuba1c)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    124398902 (tuba1c)
  09143 Cell growth and death
   04210 Apoptosis
    124398902 (tuba1c)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    124398902 (tuba1c)
   04540 Gap junction
    124398902 (tuba1c)
  09142 Cell motility
   04814 Motor proteins
    124398902 (tuba1c)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    124398902 (tuba1c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smeo03019]
    124398902 (tuba1c)
   03036 Chromosome and associated proteins [BR:smeo03036]
    124398902 (tuba1c)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:smeo04812]
    124398902 (tuba1c)
   04147 Exosome [BR:smeo04147]
    124398902 (tuba1c)
Messenger RNA biogenesis [BR:smeo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     124398902 (tuba1c)
Chromosome and associated proteins [BR:smeo03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     124398902 (tuba1c)
Cytoskeleton proteins [BR:smeo04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    124398902 (tuba1c)
Exosome [BR:smeo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   124398902 (tuba1c)
  Exosomal proteins of other body fluids (saliva and urine)
   124398902 (tuba1c)
  Exosomal proteins of colorectal cancer cells
   124398902 (tuba1c)
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 124398902
NCBI-ProteinID: XP_046725347
LinkDB
Position
16:complement(13218437..13221659)
AA seq 451 aa
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSIEGEGEEEGEEY
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgcgtgagtgcatctctatccacgtgggtcaggctggtgtccagattggcaatgcctgc
tgggaactttactgtctcgaacacggcatccagccggacggacagatgccgagcgacaag
accattggaggtggagatgattccttcaacacattctttagcgagactggagctggaaag
cacgttcctagggcagtttttgtggatctggagcccactgttatagatgaggttcgcact
ggaacgtatcgtcagctgttccaccctgagcagctcatcacaggaaaggaggacgctgca
aacaactacgctcgtggtcactacaccattggcaaggaaattattgatctggttttggac
agaatccgcaagctggctgaccagtgcacaggtctgcagggtttcctggtcttccacagc
tttggtggtggaaccggatctggtttcacctccctgctgatggaacgcctgtccgttgac
tacggtaagaagtccaagctggagttctccatctacccagctccccaggtttctactgct
gtggtggagccctacaactccatcctgaccacccacaccactctagagcactctgactgt
gccttcatggttgataatgaagccatctatgacatttgccgtaggaacctcgatattgag
cgtccttcttacaccaacctgaataggcttattagtcagattgtgtcctccatcactgcc
tcactccgtttcgatggtgccctcaatgtcgaccttactgaattccagaccaacttggtg
ccctatccccgtattcatttcccactggccacctatgctccagtgatctctgcagagaag
gcctaccatgagcagctctctgtgtctgaaatcacaaacgcatgctttgagccggccaat
cagatggtgaaatgtgacccacgtcacggcaagtacatggcctgctgcctgctgtaccgt
ggtgatgtggtgcctaaagatgtgaacgctgctatcgccaccatcaagaccaagcgttcc
atccagtttgtggactggtgtcccactgggttcaaggtgggtatcaactaccagcctccc
actgtggttccaggtggagacctggccaaggtgcagagggctgtgtgcatgttgagcaac
accacggccattgccgaagcctgggctcgtctcgatcacaagtttgatctgatgtacgcc
aagcgtgccttcgtgcactggtatgtcggtgagggcatggaagagggtgagttctcagag
gcccgtgaggacatggctgccctggagaaggattatgaagaggtcggtgttgactccatt
gaaggtgagggagaggaagaaggagaggagtattag

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