Silurus meridionalis (southern catfish): 124398980
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Entry
124398980 CDS
T08004
Symbol
ccnt1
Name
(RefSeq) cyclin-T1 isoform X1
KO
K15188
cyclin T
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
124398980 (ccnt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smeo03021
]
124398980 (ccnt1)
Transcription machinery [BR:
smeo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
124398980 (ccnt1)
Brd4/P-TEFb complex
124398980 (ccnt1)
7SK RNP complex
124398980 (ccnt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CycT2-like_C
Cyclin_N
DUF3741
TFIIB
Motif
Other DBs
NCBI-GeneID:
124398980
NCBI-ProteinID:
XP_046725535
LinkDB
All DBs
Position
16:13201003..13206744
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AA seq
662 aa
AA seq
DB search
MAAPQNSRSGKKNKWYFTREQIENSPSRRAGLDPDKELSYRQQAANLLQDMGQRLNVSQL
TINTAIVYMHRFYMIQSFTRFHRNVIAPAALFLAAKVEEQPRKLEHVIKVAHACLNPQET
PLDSRSDTYLQQSQDLVMLESIILQTLAFDITIDHPHTHVVKCTQLVRDECGMLACLSGD
ISFGMFLISASKDLAQTSYFMATNSLHLTTFCLQYSPPVVACVCIHLACKWSNWEIPVST
DSKHWWEYVDRKVTLELLDELTHEFLQILEKTPSRLKRIRNWKASGQTAKKPKEGDKTET
MMSMISMASSESTLAGLMSLSAPPSASSSPTSTSSTEDKQPVFKVPNPPEPPAPTRVSLS
EYRAKHADELAAQKKKLENMEASVKREYATAAQALMNQQRKEKHHHTHHQQQAGSSSSEP
IVLKIPLDERQDRGSIKMRLPNNNRGAEQDLKLKLRLPDKRSGSGDDCKSKDKHRERSNH
HHHHNHHHHHSSGSGSTSSSTHKHSSSTSASTSSKKADTARTSSSSSSSRKRTHSSEPSS
SAHPSKVSKLSRNSYQLPPLPADILPSLALSHNQGFPHSKTDKADTNGHSGSTGGQSNEF
QDTFDMLSSLLSAQGVQPVQPQIFNYHSQYGDYRFSASSKGANPQPPPLPSEPPPRLPPL
PE
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggcggctccgcaaaattctcgctcgggaaaaaagaataaatggtacttcacacgcgaa
cagatcgaaaacagtccgtctcggagagcgggactcgaccctgacaaagaattatcctac
agacaacaggcggctaatctgctccaggacatggggcaacggctcaatgtatctcagctc
acgattaacactgccatagtgtacatgcatcgcttctacatgatccagtctttcactcgc
tttcacagaaacgtgatcgcccctgctgcccttttcttggctgcgaaggttgaagagcag
cctcgcaagctggagcatgttattaaggtggcccatgcctgtctcaatccacaggagact
cctctagactctaggagtgatacttacctgcagcaatcccaagacctggtcatgctcgag
agcattatacttcagaccctcgcttttgacatcaccattgatcatcctcacacgcatgtt
gtcaagtgtacacagcttgtacgagatgaatgtggaatgctggcatgtttgagtggcgat
atttcatttgggatgttcttgatttcagcaagtaaggacctggcccagacatcatatttt
atggcaaccaacagtctgcacctgaccactttctgcctgcagtacagtccacccgtagtt
gcgtgcgtgtgcattcatttggcctgcaagtggtctaactgggaaatacccgtctctaca
gacagcaagcactggtgggagtacgttgaccgaaaagtcactctcgagctgctggatgag
ctcacgcatgagtttcttcagattttggagaagacaccaagccgtttaaaacgcattcga
aactggaaagcatcaggtcaaacagcaaagaagcccaaagagggtgacaagacggagact
atgatgagcatgatctctatggcatcctctgaaagcacactggccggtttgatgagcctc
tcggctccgccttcagcctcttcctcccccacctcaacatcatctacagaggacaagcag
cctgttttcaaagtgcctaacccaccagaaccacctgctcccacgagagtgtccctgagc
gagtaccgtgcgaagcatgcagacgaactcgccgcacagaaaaagaagctggaaaacatg
gaggcctctgtaaagcgcgagtacgccacggctgcccaggccctcatgaaccagcaacga
aaagagaaacaccaccacacccaccaccagcagcaagctggttcgagctcttccgagccc
atcgtactaaagatcccactagatgagaggcaggaccgcggctcaatcaaaatgcgtctg
ccgaacaacaacagaggagccgagcaggaccttaaattaaagcttcgcctcccagacaaa
agatcagggtcaggggatgattgcaagagcaaagacaagcacagagagcggtccaaccat
caccaccaccacaatcatcaccatcaccactcctcagggagtggctctacatcctcatct
acacacaaacactccagctctacgagcgcttccacaagtagcaaaaaagcagacacggcg
agaacgagctcatcttcctcgtcctcccgaaagcgaactcactcttctgagccctcatcc
agcgctcacccttcgaaagtcagcaagttgtccaggaattcataccagctgcccccactg
cctgcagacatcctgccctcgcttgcgctttcacacaatcagggtttcccacactccaaa
actgacaaggctgacaccaacgggcacagcggcagcactggaggtcagtccaacgagttc
caggacacctttgacatgctgagttcgttgctgagtgcccagggggtgcagcccgtccag
ccccaaatatttaactatcactcccagtacggcgattacagattcagcgcaagctcaaaa
ggagcgaacccgcaacctcccccgcttccttcagaaccccctccacggcttccaccgctg
cccgaatga
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