Silurus meridionalis (southern catfish): 124399072
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Entry
124399072 CDS
T08004
Name
(RefSeq) platelet glycoprotein Ib alpha chain
KO
K06261
platelet glycoprotein Ib alpha chain
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124399072
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
smeo04090
]
124399072
CD molecules [BR:
smeo04090
]
Proteins
124399072
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_LRWD1
LRRCT
LRR_9
Motif
Other DBs
NCBI-GeneID:
124399072
NCBI-ProteinID:
XP_046725727
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Position
16:complement(17222262..17224968)
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AA seq
650 aa
AA seq
DB search
MLLILFFLVFRHSMEITISGCLIDRDKDHRPRVSCESQGLTTVPDGIDPETQTLVLSQNA
FISLFWAAYSTFIHLHELDLSQNLISTINYSGSVLGNLSVLRLSNNKLTSLGRATFMSTP
SLMEVYLDGNAISSLDNATFIDLPLLELINLSRNKLHILPSHLLQHISSSSLKNFDLEEN
HLQHLPDDFFASKPELPYVFLSKNNWVCTCQVSYLQSYLDNQGHNVYSHTGPSSIENVPE
NVTCSAPPKLQGRAILDLKDEEFCTSDTESQPSTIQTPQITSTTGLTITIIQSKLITTVI
PTTTSTSTPTTTQMVMPKTTLISTPTTTPKTMPMSTTTTMTTSTPTTATSTMTRPTSTTR
TPTSTPTAVSIPTTPTSTPTYNPTSTPKTAESSSTPIPTTIATIKSVTMVTGQAKGVVSE
ISSGQSSVPWCWWLFITVLLLCIFSAIFACMLFLWLILMYITLYRPIKRQCHCIQGVALK
AYRVTAGESVTMNRTKEEKVALLPTEMIQETQPVFRSVLFITKGEDDGEADDKTEGTGNK
EEENKRGTDAVSKIVLCPAVTLHRETETKDRKEVFRKTFYRVISREEELKGWREVEENCL
GITERDKGREEIAVEREKTRYSLILREERGSVMEDRRGETEWLVGEWEMR
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgctcctcatcctcttcttccttgtctttcgacactccatggaaataaccatcagtggt
tgcctcatagacagggacaaagaccaccgacctcgtgtgagctgtgaaagtcagggtctc
accacagtgccagatgggatagatcctgaaacacagacactcgtcctctctcagaatgca
ttcatctctcttttctgggctgcctacagcacattcatacaccttcatgagctggacctg
agccagaacctcatcagcacgatcaactattcgggttctgtgctgggaaacctgagtgtt
ttgcggctatctaataacaagctgactagtttgggcagagctacatttatgtccactcct
tctcttatggaggtctatttggatggaaatgccatcagttctcttgacaatgcaaccttc
attgaccttccacttctagagctcattaacctttcacggaacaagctgcacattctgcca
tcacacctgctgcagcacatttcctctagcagcctgaaaaactttgatctggaggagaat
catctccagcacctaccagatgatttttttgcttcaaaacctgagctaccatatgtcttc
ctttcaaaaaataactgggtttgtacgtgccaggtaagctacctgcagagctacctggac
aatcagggtcataatgtctacagccacaccgggccctccagcatcgagaatgtcccggag
aatgtaacgtgttctgcgccgcctaaactacagggtcgagctatactggacctgaaggat
gaggagttctgcacttcagatactgagtcacaaccctccaccattcaaacacctcaaata
acatcaaccactggactgaccataaccatcatccaatcaaagctcataacaacagttata
ccaaccactacatcaacatctacaccaacaactacacaaatggttatgccaaaaactaca
ctaatttctacaccaacaactacgccaaagactatgccaatgtctactacaacaaccatg
acaacgtctacaccaacaacagcaacatctacaatgaccaggccaacctctactacaaga
acaccaacatctacaccaacggcagtgtctataccaacaacgccaacgtctacaccaaca
tataacccaacaagtacaccaaagactgctgagtctagttctacccctattccaactaca
atagccactattaagtcagttaccatggtgacagggcaagcaaagggagttgtctcggag
atcagtagtggtcagagctcagtgccgtggtgctggtggttatttatcactgttttgtta
ttgtgtattttctctgccattttcgcctgtatgctctttctctggctcattctcatgtac
atcacactttacagaccaattaaacggcagtgccactgcatccagggtgtggccctaaag
gcatatcgggtcacagcaggagagtcagtaaccatgaacagaaccaaggaggaaaaagtg
gcacttttacccacagagatgatacaagaaactcagccagtcttccgttctgttcttttc
atcacaaaaggagaagatgatggtgaagcggatgataagacagagggaactgggaataag
gaagaagaaaataagagaggaactgatgctgtgtctaaaatagtcctgtgtccagcagtg
actctgcacagagagacagaaactaaagacaggaaggaagtgttcaggaaaactttttac
agagtgataagcagagaggaagagctaaagggatggagggaggtggaggagaactgcttg
ggaataacagagagagataaaggaagagaagaaatagcagtggagagagaaaagacacga
tacagccttattctcagggaggagagagggagtgtgatggaggacagaagaggagagaca
gagtggctggtgggggagtgggagatgagatga
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