Silurus meridionalis (southern catfish): 124399211
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Entry
124399211 CDS
T08004
Symbol
eef1a2
Name
(RefSeq) elongation factor 1-alpha 2
KO
K03231
elongation factor 1-alpha
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124399211 (eef1a2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124399211 (eef1a2)
03016 Transfer RNA biogenesis [BR:
smeo03016
]
124399211 (eef1a2)
03012 Translation factors [BR:
smeo03012
]
124399211 (eef1a2)
04131 Membrane trafficking [BR:
smeo04131
]
124399211 (eef1a2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124399211 (eef1a2)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
124399211 (eef1a2)
Transfer RNA biogenesis [BR:
smeo03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
124399211 (eef1a2)
Translation factors [BR:
smeo03012
]
Eukaryotic type
Elongation factors
124399211 (eef1a2)
Membrane trafficking [BR:
smeo04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
124399211 (eef1a2)
Exosome [BR:
smeo04147
]
Exosomal proteins
Proteins found in most exosomes
124399211 (eef1a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
124399211
NCBI-ProteinID:
XP_046725954
LinkDB
All DBs
Position
16:6429586..6439923
Genome browser
AA seq
463 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVAVNKMDSTEPSYSEKRYDEIVKEVSTYIKK
IGYSPASVPFVPISGWHGDNMLEPSANMTWFKGWKLERKEQHASGITLLEALDTIMPPTR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGILRPGMVVTFAPVNITTEVKSVEMHHESLS
EAVPGDNVGFNVKNVSVKDIRRGNVCGDSRSDPPQEASGFTAQVIILNHPGQISAGYSPV
LDCHTAHIACKFAELREKIDRRSGKKLEDNPKYLKSGDAAIVDMIPGKPMCVESFSQYPP
LGRFAVRDMRQTVAVGVIKNVEKKIGGSGKITKSAQKAQKAGK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggagaagattcatattaatatagtcgtgattggccatgtcgattctgggaag
tccactaccaccggccaccttatttataagtgtggtggcattgacaagagaaccattgaa
aaattcgagaaggaggctgcagagatggggaaaggttcatttaaatatgcttgggttctg
gataagctaaaggcagagcgagagagaggtatcacaatagacatttccttgtggaagttt
gagacctctaaatactacatcacgatcattgatgctccaggacacagagatttcatcaaa
aacatgattacagggacctcccaggcagattgtgctgttcttatagtggcagctggggta
ggtgaatttgaggcgggtatctctaagaatggacagacacgtgaacatgccttgctggca
tacacactgggtgtcaagcagctgattgttgccgttaacaaaatggactccacagagcct
tcttacagtgagaagcgctatgatgaaatcgttaaagaggtcagtacttacattaagaag
attggctacagccctgcctctgtacccttcgtccctatttctgggtggcatggagacaac
atgctggaaccgtccgctaatatgacatggtttaaaggctggaaacttgagaggaaggaa
caacatgccagtggaatcactcttcttgaggccttggacactatcatgcctcccactcgt
cctactgacaagcctttacgccttcctctgcaggatgtttacaaaattgggggtattggc
acagtacctgtaggcagggtggaaactggcatcctgcgtccaggcatggtggtgactttt
gcccctgtcaatataaccacagaagtaaagtctgtagagatgcaccatgagtccctgagt
gaagcggtaccaggtgataatgtaggattcaatgtgaagaatgtgtcagttaaggacatt
cgcaggggaaatgtgtgtggagacagccggtccgacccaccccaagaagcctcaggcttc
acagcacaggttattattctaaatcatccagggcaaatcagtgctggctactcccctgta
cttgactgtcacacggctcacattgcctgcaagtttgcagagttgagagagaagattgac
cgcaggtcagggaagaaactggaagacaatcctaaatatttgaagtctggagatgctgct
attgtggatatgattccaggcaaacccatgtgtgtggaaagtttttctcagtaccctcct
ttgggacgctttgctgtgcgagatatgagacaaaccgttgctgttggggtcataaagaat
gttgaaaagaaaattggtgggagtggcaaaatcaccaaatctgcccaaaaagctcagaaa
gcaggaaagtga
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