Silurus meridionalis (southern catfish): 124399213
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Entry
124399213 CDS
T08004
Name
(RefSeq) teashirt homolog 2 isoform X1
KO
K09236
teashirt
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124399213
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
124399213
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_4
zf-C2H2_2
zf-C2H2
Zap1_zf1
zf-C2H2_3rep
Zf-C2H2_ZNF451_C
zf-met
zf-C2H2_jaz
zf-C2H2_6
Homeobox_KN
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
124399213
NCBI-ProteinID:
XP_046725957
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All DBs
Position
16:11332009..11377195
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AA seq
1022 aa
AA seq
DB search
MPRRKQQAPRRAAVYEPDDDVGAPEPVAEEEEGNDMQNEDEGSEKISSKILDDKETDNKS
SYSFQNSPVSVLSNQEVDLESRLSDGSDRLSDFKASSPPESLRNNENHVSKPKDEMYSSL
EKMRATYVNFLSDSYWTNIGLDLKVGNTGNKPNCDSSNASAKREFDWHQDALSKTLQQTL
SPKPVSKPNLFSSVHLYRQSSKACGTVFTGASRFRCKDCSAAYDTLVELTVHMNKSGHYQ
DDNHSRQGIASTSSSKSRKRNLQDMEGKEDAQKVLKCMFCGHSFDSLQDLSVHMIKTKHY
QKVPLKEPIPVITPKLVPPAKKRAFESTRPCSPDSTTGTMGYSEAQKLSALTNAPNNRYG
YQNGASYTWQFETCKSQILKCMECGSSHDTLQQLTTHMMVTGHFIKVTNSASKKGKQLTL
DPLALEKMQTLAEPTVNESEGQKASPKSTASGDSQKSSPKEKKPDQEEERNKNDQQDGAD
QKGIDASFKYPYLREEDLEQGASEGGDILKSLANTVATAINKAQTGTPSWSAYPSIHAAY
QLSGIIKNAPLSASPPIQVKQSHSHRLRLIAPKGKFYQGLRGHESFLGHNNLDIKKERSS
VSDDKESQNSKFDLAENDDSDCQDDSSSSSKLDADCVSEGNDTIKGKLSPAFSDTANPSP
SPPASNGHSSSSDLVSDSQEVPTINPLSALQSVLNNHLGKANKPRQEGVLSQRIQPIFSE
LSRGLEKPASILTSSAVIRANSNFIFTNNDQPMDLTKNKHNKLTSSFSSQSSTPMPQKHA
LSDIADMVKVLPKATTPKPSIPSRVPAMKLESDVRRFEDVSSEVYSVHKRKGRQSNWNPQ
HLLILQAQFASSLFLTSEGKYLLSDLGPQERMHISKFTGLSMTTISHWLANVKYQLRKTG
GTKFLKNMDTGHPVFYCNDCASQFRMPSAFISHLESHLGFQIKDMSKLPVEHQTKVAEPE
LAKAFSVRVTEALVTEEDIDSKFKCKLCSRTFASNHAVKLHLSKTHSKSPENHSQFVEMD
KE
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggaggaagcagcaggcgccccggcgggctgcggtgtatgagccagatgacgat
gttggtgcccctgaaccagtggcagaagaggaggaaggaaatgacatgcagaacgaagat
gagggctctgaaaagattagctctaagattcttgatgacaaggaaactgacaacaagagt
agctacagcttccagaattctcctgtcagtgtcttgtccaaccaggaggttgatctggag
tcccgtctgagtgacggcagtgacagactctctgacttcaaggcttcttccccaccagaa
agcctgagaaacaatgagaatcatgtttcaaagccaaaagacgaaatgtacagtagcctt
gagaaaatgagagcaacttatgtcaacttcctctccgactcctactggacaaatattgga
ctagacctaaaagttggaaacaccggcaacaagccaaactgcgacagctccaatgcaagc
gctaagcgtgagtttgactggcatcaggatgcactgtccaaaaccttacagcaaacattg
tccccaaaacctgtatcaaagcccaatctgttcagctcagtgcacctgtacaggcaaagc
agcaaagcgtgtggtacagtctttacaggggccagtcgcttccgctgcaaagactgcagt
gcagcatatgacacattggtggaattgacagtgcatatgaacaagagtggacactaccaa
gatgacaaccatagcagacaaggaattgcctccacttcatcttccaaaagtcggaagagg
aatcttcaagatatggaaggcaaggaggatgcacagaaagtgctgaaatgcatgttttgt
ggccattcttttgactctctccaggacctaagtgtccacatgattaaaacaaaacattac
cagaaagtgcctttgaaagaacctattccagtaatcactcctaaattagttccaccagca
aagaagcgtgcctttgaatctacaaggccttgttcccctgactccaccactggtactatg
ggctacagtgaagcccaaaagttatctgctcttacaaacgccccaaacaaccgatatggc
tatcagaatggtgctagctacacgtggcagtttgaaacatgcaaatcccagatcctgaag
tgcatggaatgtggaagctcacatgatactcttcagcagctgaccactcatatgatggta
actggtcatttcatcaaagtgacaaattcagcatccaagaagggtaaacaattaactctt
gatccattagcgctagagaagatgcagacactagcagaacccactgttaatgaatctgag
gggcagaaggcctctccaaaaagtactgcctctggggattcgcagaaatcttctccaaag
gaaaagaagcctgaccaagaagaagagcgaaataaaaatgaccagcaagatggggcagat
caaaagggaattgatgctagtttcaaatatccatacctgcgagaagaggaccttgagcaa
ggagccagtgaagggggtgatatactgaaatctttagccaacacagtggccacagcaatt
aataaggctcagacggggacaccaagctggagtgcttaccccagcatacatgcggcttac
cagctatcaggcataataaagaacgcccctctttctgcctcgccccccatacaggttaaa
cagagtcatagccacagattaaggctcattgcccccaaaggaaagttttaccagggactt
cgaggacacgagagtttcctgggacataacaatctggacatcaaaaaggagaggagcagt
gtatctgatgacaaagagagccagaatagcaagtttgatctagcagagaatgatgacagt
gattgtcaagatgattcctcttcctcttcaaagctggatgcagactgtgtaagtgaagga
aatgacacgatcaaagggaagttgagcccagctttctctgacacagccaacccttcacca
agccctcctgccagcaatgggcacagcagttcctcagaccttgtcagcgactctcaggaa
gtccctactataaaccctttaagtgcactacagtctgttctgaacaatcatttggggaag
gcaaataagccaaggcaagagggggttctgtcacaacgcatccaacccatattctcagaa
ctaagccgtggtcttgagaaaccagcctcaatcctcacatcctctgctgtcatcagggcc
aacagcaacttcatctttacaaataatgaccagccaatggacctaacaaaaaacaaacat
aacaaactgacttcctcgttttcttcgcagtcctccactcctatgcctcagaaacatgca
ctgtctgatattgctgacatggtaaaggttcttcccaaagccacgacgccaaagccctca
ataccatctagagtgcctgcgatgaaactggagtcagacgtgcggcggtttgaagatgta
tccagtgaggtgtattccgtccacaaacgtaaaggcaggcaatcaaactggaaccctcag
cacttgttgattcttcaagcccagtttgcttccagtctttttctaacctccgagggcaag
tatcttctctctgaccttggtcctcaggaacgcatgcacatctccaagtttactggactt
tccatgacaaccatcagccactggctagccaacgtgaaataccaacttagaaaaacaggt
gggaccaaatttttaaagaacatggacacgggtcatccagtcttctattgcaacgactgc
gcgtcccagtttagaatgccgtcggctttcatttctcatcttgaatcccatcttggtttt
cagattaaagacatgagcaaactgccagtcgagcatcagacaaaggtagcagagcctgaa
ctggcgaaagcctttagtgttcgagtgacagaagcactggtgacggaggaagacattgac
tcaaaattcaaatgcaagctttgtagtcggacatttgccagcaaccatgcagtcaaactt
cacttgagtaaaactcacagcaaatctccagaaaatcattcacaatttgttgaaatggac
aaagagtag
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