Silurus meridionalis (southern catfish): 124399417
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Entry
124399417 CDS
T08004
Symbol
lgi3
Name
(RefSeq) leucine-rich repeat LGI family member 3
KO
K19999
leucine-rich repeat LGI family member 3
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124399417 (lgi3)
Membrane trafficking [BR:
smeo04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
124399417 (lgi3)
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GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_5
LRR_4
LRR_1
LRR_9
LRRCT
LRR_14
LysM2_CERK1_LYK3_4_5
Motif
Other DBs
NCBI-GeneID:
124399417
NCBI-ProteinID:
XP_046726240
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All DBs
Position
17:complement(4260615..4273363)
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AA seq
555 aa
AA seq
DB search
MSDSEFRIVSRWPRGTRSAAAFLFLLLVCTHGAVEGRRVTKIPRCPVTCSCTKDSAFCVD
TKTIPKSFPPGIISLTMVNAGFTEIPEGAFSHLHLLQFLLLNSNTFTVIADDAFTGLSHL
QYLFVENNDIRSLSKYTFRGLKSLTHLSLSNNNLQVLPRELLKHQDILTDLDLRGNSFRC
DCKIKWLVDWMEKTNTSVPSIYCASPFEFQGRRIQDLMPRDFNCISADFALYETYPFQSL
SVESYDFNDDLYVVFAQPNTGMCTVYIWDHVNMLFRTHYNITSRSAVYCKPVVINNTLYM
VVAQLFGGSHIYKWEEGPLQFVKVQDIDASRIRKPNFIETFQIDGEWYFAVVDSSKAGST
SIYRWNSNGFYSHQSLHPWHRDTHIHFLEVDGKSRLILSSSSQPPVVYQWNRGTRQFVFH
SEIPHAGDVHMVKHFWAHQALYLCLTRFIGDSRLVRWESQRFVEIQTLSSRGSMAVHPFS
VSVRQYLVLGSDYSFSHIYLWDELTQRFQPFQEINVLAPRGFSLVSIDNKDILLVSSFKG
KTVAYQHLLVDLSAK
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattcagagttcaggattgtgtccaggtggccaagagggaccagatcagctgct
gcatttctctttcttcttctggtgtgtacacatggagcagtcgagggacgcagagtcacc
aaaatccctcgctgtccagtgacctgctcctgcaccaaagacagcgccttctgtgtggac
actaaaaccattcccaagagctttccgcccggcatcatttcactgacgatggtgaatgca
ggctttactgagatcccagagggagcgttctctcacctgcacttgctgcagttccttttg
ctgaattccaatactttcactgtgattgcagatgatgccttcaccggcctttcgcacctg
cagtatctgtttgttgagaataatgacatccggtccttgtccaaatacactttcagaggc
ctgaaatctctaacacatctatctctgtcgaacaataatctgcaggtcctacccagagag
ttgctcaaacaccaggacatcctcactgacctagacctgagagggaactcgttccgctgt
gactgtaagattaagtggctggtggactggatggagaaaaccaacacctccgtcccctct
atatactgcgcaagtccctttgagttccagggtcgacgcattcaggacttaatgccacga
gacttcaactgtattagtgcagattttgctctgtatgagacctacccgttccagtctctc
tctgtggagtcgtatgacttcaatgatgacttgtacgtggtgttcgcgcagcccaacact
ggaatgtgtaccgtttacatctgggatcatgtgaacatgcttttcaggacccattacaac
atcacctctcgatctgcagtgtactgcaagcctgtagtgatcaacaacaccctctacatg
gttgtagcccaactctttggaggatcccatatctacaagtgggaagaggggcctctacag
tttgtcaaagtccaggacatcgatgcgagccgtatacgcaaacctaacttcatcgagacg
tttcagattgacggggaatggtattttgctgtcgtagacagctccaaggcaggctccacc
agcatctaccgctggaacagcaacggcttctactcgcaccagtcgcttcacccgtggcac
cgtgacacacacatacacttcctagaggtggacggaaagtccaggctaatcttgtcgagc
tcctcgcagcccccggtggtctatcagtggaaccgcgggacacggcagttcgtcttccac
tcagaaatcccgcacgcaggtgatgtgcacatggtgaagcacttctgggctcaccaggct
ctctatctctgcctgacgcgcttcattggcgactcgaggcttgtgcgctgggaaagccag
cgttttgtggagatccagacgctatcttcacgtggctcaatggcagtgcatccatttagc
gtcagcgtgaggcagtacctggttctgggcagcgattactccttctcacatatctacctg
tgggacgagctcacacagcgcttccagccgttccaggagatcaatgttttggcgcctcgt
ggctttagcctcgtctcaatcgacaacaaagacatcctgctcgtatccagctttaaagga
aagacagtggcgtatcagcacctactggtggaccttagcgccaagtga
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