Silurus meridionalis (southern catfish): 124399434
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Entry
124399434 CDS
T08004
Symbol
ncor2
Name
(RefSeq) nuclear receptor corepressor 2 isoform X1
KO
K06065
nuclear receptor co-repressor 2
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
124399434 (ncor2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smeo03036
]
124399434 (ncor2)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
124399434 (ncor2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
124399434
NCBI-ProteinID:
XP_046726280
LinkDB
All DBs
Position
17:complement(2655229..2718957)
Genome browser
AA seq
2298 aa
AA seq
DB search
MSSHSQPVPQSRRAMEARHMHNAAGLPLQLGRAHTDVGIVDYHTRDFGSHLSHGTLAQSH
RRRPSLLSEFQPGSERGSETHIRYEHIYLPESNSQSEVEYGEIKRPRLDIGAESLMRHTS
QRPPLPLSAEDIVKERSSSSSMGKIEPISPVSPAVMEADLELVPTRFSKEELIQNMDRVD
REITMVEQQICKLRKKQQQLEEEAAKPQEPERSISPPPSEAKHRSLVQIIYDENRKKAEE
AHRILEGLGPRVELPLYNQPSDTKQYHENIKINQVMRKKLILYFKRRNHARKQWEQKFCQ
RYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQRELQERMQNRVGQRGGL
ASAARSEHEVSEIIDGISEQENSEKQMRQLAVIPPMLFDAEQQRIKFINMNGLMGDPMKI
YKDRQVMNMWSDQEKDTFREKFIQHPKNFSLIASFLERKTVAECVLFYYLTKKNENYKNI
VRRNNRRRGRSQNNQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQV
NRNSQEEKEDKEAEKEGERDEDKNEGDDKEDGMKDDTSGEDGEDKDPPVAVKGRRTANSR
GHRKGRITRSMANEQEESSSPPLSGEMANLEMNESSRWTEEEMETAKKGLLQYGRNWSSI
AKLVGSKTVSQCKNFYFNYKKRQKLDEILQQHKMKSEQERKARRKGKALQNEETSAPSAA
DEEEMEGSGGSGNEEEAQEDGEGGPNQSSDTESLPSPHSSESSKAKDSSSSRFKSAPNTT
SASTSASSSDKDAPEEEKPQVKCEQGVVKQEEQPEGSDRVKEVHEEPEDKKPPTLEAEEG
KREGRKREREQGGRDSDSSATCSADEVEETESVEKNRITSPRPSLLSYAHDGVISTALQK
PLDLKQLKQRAAAIPPIMPDISVAAGGMLGKPQLMPDAQALYEQQIIMAHESSQVTKQQQ
QQQQQQQHPQPIKSQHYPGSIAESGSPRIRTRTPTPSDREKEDKPRAFSPLTDLKKDPGP
DHIRAMSLGRPVMSPYLHYNSSPQQERLAGVRPLHIPDPPPLISSAKPGGSITQGTPVQM
HSPAHSSDYGKMTPGALPLSWMEHRKLAGYPVVKQEQLSPRGPSSSQAENLSTHGIAPES
LGGRGPMPAVQGGSITKGIPGTRIHPESSITYRGGSITQGTPADVLYKGTITRLIAEDSP
SRDRSREENQAKGHVLYEGISGHVLSYDRAPNPKEEGRGEVLGMKRSYEIMEGGGISRVL
PLRDTLSTAEGLMGRAMPQERESPRPHHRGSISQGIPRHVDAQEEYSRREPKQLKRESSP
SPRGPDAIKGRPHDGVVPTVKEGGRSIHLIPPEGVLMSKAPKEGSITQGTPLKLEPAGSS
KRHDVRSIISSSPRPYSNLPPHLERGHYDEPGPKSRPSAVVSTSSSLVLGAEQAGKSHHS
PVGYDEHKRAGYAPPSHRGSPLTSRDTPQRQHEGSAKVPQQERKSTPTPREMSTTKSPLP
VVGDHAASLASYERLLQGLGTDMYPRQISLPFDPAALPRGIPLDPAAYYLPRHLAPAPGY
PHPYPPYLIRGFPDTAALENRHTLFTDYITSQQMHQWPAAAMTQRSDLLRGPRDPPLTLP
YSPATRGASASPMDRINYLSGTPTTFPSRGYTTSPISPVGSSHISKLQGTPTPSERERDR
ERERDRERDRERDRERERERERDRERERERERERERDRDRERERSLGHGNVEHAPIWRPG
AAEQTGSSSSSSRPPSLPYSHQAMSPRPQESLQHRPTVLHNTSSKNLQSSEHSSTSVLRS
TTQSSSRYSNYSGHPQRASDSYPDSSGVKEQSKSQNRGVLPKQPEPKSESKMSSPSGSSV
YASAFAQAPGSHVGLTTGRTIPILATESGIMNKTPNKDHELRALAQQKEHQSVFYIAEER
LSPSQQPPSPAVKSSQRVVTLAQHISEVIKKDYMRQSQQGQAGGQSVYGYHSSPVLDLTR
PPSAPQTPLETSVGSRFTPEGSSNDRDRLRDRSPPQSKVSPVSLSADCIEPVSPPGGVSE
PESQAAACPSEQAEQGMGSRSPSSSSQPPAFFSKLTENNSAIVKSKKEMIKKMVVGNDSD
FNSGQPGTEIFNMPASATGGSVAVRSQPPPDSSGNTIGLEAIIRKALMGKYDDQADERSN
SVSGPPAAADPRTDEPYTLSGKSKSSGRSNGRKTKSPGPGLSGGERPSSVSSVHSEGDCN
RRTPLTNRVWEDRPSSTGSTPYPCNLFTMMRMPGSVMPGPSPSPTQSTAGPPQPQSRTWE
EEPKPLLCSQYETLSDSE
NT seq
6897 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctcactcgcagccggtgcctcagagccggagagccatggaagctcgacacatg
cacaacgcagccggtcttcctctgcagctcggccgggctcacacggatgttggaattgtg
gactaccacacgcgggacttcggttcccatctctcccatggaaccctcgctcagtctcac
cgccgcaggccgtccctgctgtctgagttccagcccgggagcgagagggggtcggagacc
cacatccgatacgagcacatctacctacccgaatccaacagccaatcagaggtggagtac
ggcgagatcaagcggcctcgtctggacatcggggcggagtctctgatgcgccatacgtct
cagcgcccgcctctccctctgtccgccgaggacattgtaaaggagcgtagcagcagcagc
tcaatggggaagatcgagcccatctctccagtcagtccggctgtgatggaggccgatctg
gagcttgtgcctactcgcttttctaaagaggagctcatccagaacatggaccgtgtggac
cgagagatcaccatggtggaacagcaaatctgcaaactgaggaagaaacagcaacagctg
gaggaagaggcagcgaagcctcaagagcccgagcgcagcatttctcctcctcccagcgaa
gccaaacaccgcagcctcgtacagatcatctacgatgagaaccggaaaaaagcagaggag
gctcatcgtatccttgagggactgggaccccgtgtggaactgccgctgtataaccagccg
tctgatactaagcagtaccatgagaacataaaaataaaccaggtgatgaggaagaagctc
attctctacttcaagaggagaaaccacgctcgcaagcaatgggagcagaagttctgccag
cgctatgaccagctgatggaggcttgggagaagaaggtggagcgcatcgagaacaaccct
cggcgccgggccaaagagagcaaagtgcgcgagtactacgagaaacagttccccgagatc
cgcaagcagagggagctgcaggagcgcatgcagaacagggtgggtcagcgtggagggctg
gcgtctgccgcacgcagcgaacacgaagtgtctgagatcatcgatggcatttccgaacaa
gagaactcagagaaacagatgcggcagttggccgtgattcccccgatgctgttcgacgcc
gaacagcagaggataaagttcattaacatgaacggtctgatgggcgaccccatgaagatc
tacaaagacagacaggtgatgaacatgtggagcgaccaggagaaggacaccttccgagag
aaatttatccagcaccctaagaactttagcctgatagcctcctttctggagagaaagacc
gttgctgagtgcgtcctcttttactacctgaccaagaagaacgagaattataaaaacatc
gtgcgtagaaacaaccggcgcagaggccgcagtcagaataaccagcagcaacagcagcag
cagcaacagcagcagcagcagcaacagcagcaacagcagcaacaacagcagcagcagcag
caacaacaacagcaacaacagcagcagcagcagcagcagcagcaacaacagcaacaggtg
aaccgcaacagccaggaggagaaagaggacaaggaggcggagaaggagggagagagagac
gaggacaagaacgaaggagacgacaaggaggatggcatgaaagatgacacgtcaggagag
gacggcgaggataaggaccctcctgtagcggttaaaggacgccgcacggccaacagccgc
ggacaccgaaaaggcagaatcactcgttcaatggccaatgagcaggaggaaagcagctct
cctcctctcagcggggaaatggcgaacctggagatgaacgagagctctcgctggacggaa
gaggagatggagacggccaagaaaggacttctacaatatggccgcaactggtcgtccatc
gccaagctggtgggctccaagaccgtctcgcagtgcaagaacttctacttcaactacaaa
aagaggcagaaactggacgagatcctgcagcagcataaaatgaaatcggagcaggagcgt
aaggccaggcgtaaaggtaaagctctgcagaacgaagagaccagcgctccctctgctgct
gatgaggaggagatggaaggatccggaggcagcggcaacgaggaggaagctcaggaggat
ggagagggaggccctaaccagagctccgatacggagagcctcccgtccccgcactcgtca
gagagcagcaaggcgaaagattcaagctcgagccgattcaagtctgcgccgaacaccacg
tccgcgtccacgtccgcgtcttcttccgacaaagacgccccggaggaggagaaaccgcag
gtaaagtgtgagcagggagtcgtgaagcaggaggagcagcctgaggggagcgacagagtc
aaggaggtgcacgaggagccggaggataagaagcccccgactctggaggccgaagaaggg
aagagggaaggacggaaaagagagcgggagcagggagggcgagacagcgactcgagcgct
acatgcagtgcagacgaggtggaggagacggagagcgtggagaagaacagaataacgtct
cccaggccgagcctgttgagttacgcccacgacggcgtgatctcaactgcactgcagaaa
ccactggacctcaaacagctcaaacagagagcagccgctattcctcccataatgccagac
atttccgtagccgctggaggcatgttggggaagccgcagctgatgcccgatgcacaggca
ctctacgaacagcagatcatcatggcacacgagtcgtcccaagtgaccaagcagcagcag
cagcaacagcagcagcaacagcatcctcagccaatcaaatcgcagcattaccccggcagc
atcgctgaatccgggagcccacggatccgaaccagaacaccgacgccctccgacagggag
aaagaagataaaccccgggcgttctctcctctcaccgacttgaagaaggatcccggcccg
gatcacatcagagccatgagtctcggccgtcctgtgatgtcgccgtacctgcactataac
tcctctcctcagcaggaaaggctggctggtgtacggccgctgcacatccccgaccctcct
cctctcatttcttcagctaaaccgggcggctccatcacacagggtacgccagtgcagatg
cacagccccgcccacagctcagactacggcaagatgactcctggagcactgcctctctcc
tggatggagcatcggaaactcgccgggtacccagtggttaaacaggagcagctgtctcca
cgtggcccctcctcatctcaggctgagaatctgtccacacacggcattgctccggagagc
ctcggcggccgcggcccaatgccagctgtacaaggaggaagcatcacaaagggtattcct
ggcacgcgcatccaccccgaatcctccataacataccgtggtggctccatcactcagggc
acccctgcagatgtgctgtataagggtaccattactcgtcttatcgctgaggacagcccc
agcagagacagatccagagaggaaaaccaagccaagggacacgtcttgtatgagggcatc
agtggacacgtcctctcctatgaccgcgccccgaacccaaaggaggaaggcagaggagag
gtgttggggatgaaacgctcatacgaaatcatggaaggagggggaatctctcgagtgctg
ccattacgggacacactgtccaccgctgaggggttgatgggtagagcgatgcctcaggag
agagagagtcctcgtcctcatcaccgtggctctatctcgcagggtatcccacgtcacgtc
gacgcccaggaggagtattcgcgccgggagccgaagcagttgaagcgcgagagctctccg
tctcctcgcggccctgacgccatcaagggccgcccccatgatggcgtagtgcctacggtt
aaagagggcgggcgctccattcacctcatcccaccagagggggtgctgatgagcaaagca
ccgaaagagggctccatcacgcagggcacgcctctcaaactggagcccgcaggttcgtcc
aaacgccacgacgtgcgctccatcatatccagctcccctcggccatactcgaatctcccg
cctcatttagagaggggccactacgacgagccggggcctaaatctcggcccagcgccgtg
gtcagcacctcaagctccctggtgctgggagcagaacaggcaggcaaaagccaccacagc
cccgtgggctacgatgagcacaagagggctggatacgcgccgccttcgcacagaggatcc
ccactgacgagcagagacacgccgcagcggcagcacgaaggctcggctaaggttcctcag
caggaacgcaagtctacgccaactcctcgagaaatgagcaccaccaagtctccgctgcct
gtcgtgggggatcacgccgcctctctggcctcctacgagcggctgctgcagggtctggga
accgacatgtacccaaggcagatatcgctgcccttcgaccctgctgccctgccccggggc
attcctttagatccagctgcttattacctgccacgacacctggctcctgctcctggatac
ccccacccctatcccccttatctaatccggggcttccctgatacggcggccctcgagaac
agacacacactcttcaccgactacatcacctcacagcagatgcaccagtggcctgcagca
gctatgacgcagagatccgatctactgagaggtccacgggacccaccgctcactttaccc
tactcacctgcaacacgaggagcgtctgcgtccccaatggaccgcatcaactacctctcc
ggaacgccaaccactttccctagccgagggtataccacctcacccatttccccagtcgga
agctcgcacataagcaaactccagggcacgccgacgccttcagagcgcgagagagaccgg
gagcgagaacgagaccgcgaaagagaccgcgaaagagaccgcgagagggagagagaacga
gaacgggatcgagagagggagagggagcgcgagagggagagagagcgcgatcgggacaga
gagagagagagatctctcggtcatggcaatgtggagcatgcccccatctggagacctgga
gcagcagagcagaccggaagcagcagctctagctcgcgtccaccttctctgccttacagc
caccaggcgatgagccctcggccccaggagagccttcagcacagacccactgtcctgcac
aacaccagctcgaaaaacctgcagagttcggagcacagcagcacgtctgtactgaggtcc
accacacagagttcctcgcgttactcaaactacagcggccacccccagagagccagcgac
tcctatccagactcgagcggcgtcaaagagcagagcaaaagccagaaccgcggagttctg
cccaaacaaccggagcccaaatccgaatccaagatgtccagcccgagcggaagcagcgtt
tacgcgtcggccttcgcccaggcacccggcagccacgtggggctcacgacaggccgaacc
attcctattctggctactgagagtggcatcatgaacaagactccaaacaaggaccacgag
ctccgtgcactcgctcagcagaaggagcaccaaagcgtattttatattgcagaggagaga
ctgtctcccagccaacagcccccgtcccctgctgttaaaagctcccagagagtggtgacc
ctcgcccagcacatcagcgaggtgattaagaaagattacatgcgtcagtcacagcagggg
caggcgggaggccagtctgtctatggttatcacagttcacccgtattggacctcactcgc
ccaccaagcgcccctcagaccccactggagacgagcgtcggcagccgctttacccccgag
ggctccagcaacgacagagacaggctgagagacaggtctcctcctcaaagtaaagtgtct
ccagtgagcctgtccgccgattgcattgagcccgtctctccaccagggggcgtgtcagag
ccggaatctcaggcagcagcgtgtcccagcgaacaagccgaacaagggatgggatctcgg
tctccctcgagcagctcccagccacctgcattcttcagcaaactcaccgagaacaactcc
gccatcgtcaagagcaagaaggagatgattaagaagatggtcgtaggcaatgacagtgac
ttcaactcaggccaacccgggactgagatcttcaacatgcctgcttctgctactggaggt
tccgtggcggtgcgtagccaacctcctccagactccagcgggaacaccatcggcttggag
gccatcatccgcaaggcactaatgggaaaatatgacgaccaggcagacgagcgctcgaac
tccgtctccggaccccctgctgctgctgatccacgcactgacgagccctacacactgtct
ggtaaatcaaagagcagcggacgttccaacggccgcaagacaaagtcccccggtcctgga
ctttcaggaggagagagaccgtcttccgtgtcctccgtccactccgagggagactgcaac
cgccgcacacctctcaccaaccgagtgtgggaggacagaccctcgtccacaggctccacc
ccgtacccttgcaacctcttcacgatgatgcgcatgcctggttcagtgatgcccggcccc
tccccttcacccacccagtccaccgccggacctccacaacctcagagccggacctgggag
gaggaacccaaaccgctgctctgctctcagtacgagacgctgtccgacagcgagtga
DBGET
integrated database retrieval system
