Silurus meridionalis (southern catfish): 124399498
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Entry
124399498 CDS
T08004
Symbol
mkrn4
Name
(RefSeq) LOW QUALITY PROTEIN: makorin, ring finger protein, 4
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124399498 (mkrn4)
Enzymes [BR:
smeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124399498 (mkrn4)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124399498 (mkrn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
Torus
zf-RING_2
zf_CCCH_4
zf-CCCH
zf-C3HC4
zf-CCCH_3
zf-C3HC4_4
zf-UDP
IBR_1
zf-RING_5
zf-CCCH_DUS3L
zf-RING_UBOX
RING_XB3-XBAT31
zf-rbx1
zf-C3HC4_2
zf-CCCH_RBM22
zf-RING_11
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
124399498
NCBI-ProteinID:
XP_046726376
LinkDB
All DBs
Position
17:16534568..16538039
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AA seq
382 aa
AA seq
DB search
MEKNTQVTEEQRVRNGICRQFVNGSCSFGQHCFYRHEYPAASSAQVCRYFQKGGCWFGEN
CRYLHIAGPHRGLLLXRRGSVPVVNTSTLPGHGSASLRGSEPSLFPVFDPFNSGRRGSEP
MVTFNWRRRASEPLVTTSSHQQISQRETADIAEEEEHAVLEAGSTGHQQEEGLQPLERDN
PSLHHLPCSSQDESTSQESGATASNPGLFMAYNESKDVVCGICMDKVYEKATARERRFGI
LPNCSHAFCLGCIMTWRKTKDFQEEVIKACPQCRVRSSFYIPSKYWVCEGEAKEALIASF
KEKSSKIKCNFFLRHGCCPFALECIYSHELPPGHQPQGRFRQKNALEMLEDMDNEEQRLL
GYLIALALLDDDEFDFIQIDHV
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaatacacaggtcactgaagagcaaagagttcgtaatggtatttgtagacag
tttgtgaacggttcatgcagctttggtcagcactgcttttatcggcacgaatatcctgct
gcttcttcagctcaggtgtgcagatactttcagaaaggaggttgctggtttggtgaaaac
tgcaggtatcttcacattgctggaccacataggggacttctgctgnttaggcgtggttcg
gtgccagtagtcaatacttctaccttgccaggccatggttcggcttccctacggggttct
gagccttcacttttccctgtgttcgacccgttcaactctgggagacgtggctctgaaccc
atggtcactttcaactggaggagacgtgccagtgagcccttggtcacaacttcaagccac
cagcagatttcacaaagagaaacagcagatattgctgaggaggaagagcatgctgttttg
gaagcagggtctacaggtcatcagcaggaggaagggttgcagccactggaaagggataac
cctagtcttcatcatttaccttgcagtagtcaagatgaatccacatctcaggagagtggt
gcaactgcttcaaacccaggactgtttatggcctacaatgaaagcaaagatgttgtctgc
ggtatctgtatggacaaggtgtatgaaaaagccacggcacgtgagaggcgctttggaatc
ctgcctaactgcagtcatgctttctgtcttggctgcatcatgacttggcgaaagaccaaa
gacttccaggaggaggttataaaggcctgtccacagtgtagagtgaggtcctctttttac
attcccagtaaatattgggtttgtgagggtgaggcgaaagaagcgctaattgcatcattt
aaagaaaagagcagtaaaataaagtgcaatttctttttgcggcatggatgctgccccttt
gcgttagagtgcatctatagccatgaactaccaccagggcaccaacctcaaggacgcttt
agacaaaagaatgctttggagatgctggaggatatggataatgaggagcagcgacttttg
ggataccttattgcccttgctcttttggatgatgatgagtttgattttatacaaattgac
catgtttag
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