Silurus meridionalis (southern catfish): 124399520
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Entry
124399520 CDS
T08004
Symbol
fcho1
Name
(RefSeq) F-BAR domain only protein 1 isoform X1
KO
K20042
F-BAR domain only protein
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124399520 (fcho1)
Membrane trafficking [BR:
smeo04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
124399520 (fcho1)
Bin/Amphiphysin/Rvs (BAR) family proteins
F-BAR proteins
124399520 (fcho1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
muHD
FCH
GMIP-like_FCH
Adap_comp_sub
DUF4175
Motif
Other DBs
NCBI-GeneID:
124399520
NCBI-ProteinID:
XP_046726434
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Position
17:25458916..25496679
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AA seq
1117 aa
AA seq
DB search
METAYFRNNFWGEKNAGFDVLYHNMKHGQIATKELAEFVRERAAIEETYSKSMSKLAKMA
SNGSPLGTFAPMWDLFRMSSDKVALCHMELTRKMNDLIRDINKYGEEQVKVHRKTKEEVI
GTLEAVQVLQVQNGHLQKAREGYHAKCMELERLRKEGAPQKELEKAELKSKKAAKSFAAS
VAKFNSTGGDFEQKMSESAQKFQDIEEDHLKKMKQLIKAYSNSIEDTHVQVGQVHEEFKQ
NVENIGIRSLIQKFTEQKGTGKDRPGPVGFEEFLSTQAFDNNKKSRAKAFRIPGLGKRDK
EPELTDSALTDTPNSPLEVDDEGFMIRADAGHNGCTDDKENHFYSSDSDYDDEEPKKFHI
QIRPVCSRSNSAANELELKATVGTLSLPSNPGATTKRQLSRNISTAVRSEVEGAPHREDE
TEGLCRFTSSPNHSRLSSTASGSDSLFGPPLESAFKSHSFSGQEQLQTSEYAAFSSASSS
PDNVEDSGLDSPSHQPLDASPEPAGWAAWPSSSQPKDSASSRQPVDPFFARSPLPQEWPL
SQPSPLAPPLTKGSVSSLAFPSFSNSVDPGVWSCKHIPPEDPFVAAFEHRPAHQDTWGVP
PPSRTTHEDPFAPPTNGTKTLPPSNSSSRKDRERKRERSVPPPDSPDDPFAITMIGSPTH
QSAIAAQTALTLAVGSSSTPPVQIKQESTAWGSVHNPFSDVGQDGGRRTVKGGGEKERRS
GGEEQRRSGPPLTRLSGPQEDLCFSTDKDQDCLDIRTHTGPQRRFSGEVLILAPPRPARS
KRTSPRPNANERSRSLCSSPLPEPSPPPTSSSSSSSPSDWGNQTRTHSPARGLSRGPSPI
SLSTQESWPVAAAFTEYINAYFKGGEHNRCLVKITGDLTLSFPAGIIRIFASSPNPPVLS
FRLVSTARVDQFLPNQKLLYSDASQNDPNSKDFWFNMQALSVHLQREAELNPHASYYNVG
VLKYQVSSQDPARAPLLLSAECQRSGTVTRVALDYHCCPATAPATQLTAVQVLLPLEPTA
TDLQCQPPATWNTEEKRLLWKLPNLSPTNHSKGSGTLCASWQCLKEPRGPAPSLAVQFVG
TGASLSGLDMELVGGRYRMSLLKKRFATGKYIAGCLL
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atggagactgcatacttcaggaacaatttctggggggagaagaatgcaggctttgacgtt
ctctaccacaacatgaagcatggccagatcgccaccaaagagctggctgagtttgtgaga
gagagggctgccattgaggagacctactccaaatccatgagcaagctggcaaagatggcc
agcaatggaagcccgctcggcacattcgcccccatgtgggacttgttccggatgtcttcg
gacaaagtcgcactctgccacatggagctgacgaggaagatgaacgaccttatccgtgac
atcaacaagtacggcgaggagcaggtcaaagttcaccgcaagacgaaggaggaggtgatt
ggtactctggaggcagttcaggttctacaggtgcagaacggacacttgcagaaggccaga
gagggctatcacgctaaatgtatggagctggaacggctacgcaaggaaggagctcctcag
aaggagctggagaaggctgagctgaaatccaagaaggcggccaagtcgtttgcggcgtct
gtagctaagtttaactccacgggaggagacttcgagcagaagatgagcgaatctgcacag
aagttccaggacatcgaggaggaccacttaaagaagatgaagcagctgattaaggcttac
tcaaactccatagaggacacacacgtccaagtgggacaggttcatgaggagttcaagcag
aatgtggagaacatcggcataaggagtctgattcagaagtttactgagcagaagggcaca
gggaaagaccggccaggccctgtgggatttgaggagttcttgtccactcaagcgtttgac
aataacaagaaaagcagagcaaaagccttcaggattcctggcttgggcaagagggacaaa
gaaccagagcttacggattcggcgctgacagatacaccaaattcacctttggaggtagac
gacgaagggtttatgatccgggcggatgctggtcacaacggctgcacagacgacaaagag
aaccacttttactccagcgactcggactacgacgatgaagaaccaaaaaaattccacatc
cagattcggcccgtgtgcagccgcagcaactcagctgcaaacgagctggagctgaaggcc
accgtggggaccctcagcctgccctcgaaccctggggcgacaacgaagaggcagctttct
agaaacatcagtacagcagtacgctcggaggtagagggcgccccccacagggaagatgag
acagagggtctgtgcaggttcacctcaagtccaaaccacagcaggctgagctccacagcg
tcgggatcagattcgctctttggtcctccactagaatcagcctttaaatctcacagcttc
tcgggccaggagcagctacagacgtctgaatacgctgctttctcgtctgcttcctcgtcg
cccgacaatgtggaggactccggtttggactcaccgtcccatcagcccctggatgcatcc
ccggagccggcaggctgggcggcttggccttcgtcttctcagcccaaagactctgcatcc
tcacggcaacccgtcgaccccttcttcgctcgttcccctctgccgcaagagtggcctttg
tcccagccttctcctttggctccgcccctaaccaaaggctccgtctcttctttggcgttt
ccttccttttccaacagcgtggatcccggcgtctggagctgtaaacacatccccccggag
gaccccttcgtggctgcttttgagcaccgacccgctcaccaggacacttggggagttccg
cctccttctcgcacgacccacgaggacccgtttgccccgcctacgaatggcactaaaacc
ctccctccttctaactcgtcatcccgtaaggacagagagaggaaacgagagcgcagcgtg
ccgcctcccgattctcctgacgatcccttcgccatcaccatgatcggcagcccgacccac
caatccgccatcgccgcgcaaaccgctttaactttggcggtcggttcgagctccacccct
ccggtccaaatcaagcaggagtccacggcctggggttcggtccacaacccgttcagtgac
gtggggcaagacgggggcaggaggacggtcaagggtggaggagagaaagaacgcaggagt
ggaggggaggagcagagacggagtggcccacccctaacacgcctctccggtccacaggag
gatctctgcttctccaccgataaagaccaggactgcttagacatcagaacacacacaggt
cctcagcgtaggttcagtggtgaggtcctgatcttggctcctcctcgcccagctcggtcc
aagcgtacctcacccagaccaaatgcaaacgagcggtccaggtcactgtgttcgtctcct
ctgcctgagccgagtcctcctccgacgtcctcctcgtcctcctccagccccagtgattgg
gggaatcaaacacgtacacacagtcctgcacggggtttgtctcgagggccaagtcccatc
tctttgagcactcaggagtcgtggcctgtagctgcagcatttacagaatacatcaatgct
tattttaaaggaggagaacacaaccgatgtttggtgaagattacaggtgacctcaccctg
tcgttcccggcgggaatcattcggatatttgcctccagcccgaatcctcccgtactcagc
ttccggttggtcagcactgcacgagtggatcagttcttacccaatcagaagctcctgtac
agcgacgcgtctcagaacgaccccaactccaaagacttctggttcaacatgcaggcctta
agcgtccacttgcagagggaggcggagcttaacccgcacgcctcctactacaacgtgggg
gtcctgaagtaccaggtgtcgtctcaggacccggctcgtgctcctctgctgctgtcggct
gagtgccagcgcagcgggacggtgacccgcgtcgcccttgactaccactgttgcccggca
acggctccagccacacagctcaccgccgtgcaggtgttgctaccactcgagcccacggcc
accgacctgcagtgccaaccacctgccacctggaacacggaggagaagagactgctgtgg
aagcttcccaacctctcacccaccaaccacagcaaaggctcgggcacactgtgtgctagt
tggcagtgcctaaaggagccccgtggtcctgccccgagcctggcagtgcagtttgtgggt
acaggagcgtctctgtcaggcctggacatggagctggtgggtggccgatatcgcatgtct
cttctcaagaagagattcgctaccgggaagtacattgccggctgtttgttgtag
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