Silurus meridionalis (southern catfish): 124399550
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Entry
124399550 CDS
T08004
Symbol
usp38
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 38
KO
K11854
ubiquitin carboxyl-terminal hydrolase 35/38 [EC:
3.4.19.12
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smeo01002
]
124399550 (usp38)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124399550 (usp38)
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124399550 (usp38)
Peptidases and inhibitors [BR:
smeo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
124399550 (usp38)
Ubiquitin system [BR:
smeo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
124399550 (usp38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usp38-like_N
UCH
UCH_1
SR-25
Motif
Other DBs
NCBI-GeneID:
124399550
NCBI-ProteinID:
XP_046726496
LinkDB
All DBs
Position
2:complement(6603514..6625238)
Genome browser
AA seq
1012 aa
AA seq
DB search
MDKILEGLVSSSHPVHVKRAIVKMVVEAAEKEVTPDQCQALYHLTARLILLGEDAFQRQV
GLQVQEAYARYHRDEFARFLSKDYVLELLRQGYGPLDPRDLTILDFLHGCLRLLISCPAV
LELAPTLQTEVLRMVCERPNATFCSKLATLLSDFPQCVPRNKAAVPFCQQLVRTFAHLQC
SAAEEAELRRYVRQVGCVAALLQGIWKAEPATILPSLQEVFAVISSTDPSFEPSIALASL
VQHIPLEMIKVLIKSLTTDQNVKDASMTQALSRMIDWLSWPLANHVDIWVIALLKGLAAV
QKFTILIDVTLLKIELVFNRLWYPIVRPGALSVLSHMLLSFQHSPEAFHLVVPHVVPLVK
SLQSDGLPTSKAFLLQFTELIHCMMYQYSGFPDLYDSILEVIKDLPKPGEEKIKYVLNQS
AWTSQSNSLASGLLRLSGKSETGKTGLVNLGNTCYLNSIIQMLFMATDFRRNVLSLNLNG
SNSLMKKLQLLFAFLAHTQRAAYAPRGFLEASRPPWFTAGSQQDCSEYLRFLLDRLHEEE
KDLRALQTAHPKTVSSDTEGNNEAKAQNVTETPSHYQTKDLDTGDDRRTLVERMFGGRLS
TSIRCLQCHSVSEKEEPFTDLSLAFCPSGITGSSTAQFHQRAVNGGSENPEGTAKDERSV
EPPKTEAALSLSDLLEYFLAPEILEEENCYFCERCGSLQRAERAMHVATAPEYLVLTLLR
FSYDARCHVRHKILDNVGIPLHVHLPVHQHHSSASSPSSSSTSPPSVQMDSPGSCENLAK
KLKPSHKEKEEEDKGLTDRGKRDRESGVRRVPYVLCSVVMHSGMSSESGHYYSYGRNLSS
PSAGNSFKCPESDSGIGLSEGSTASQEVLERAGEDSRDWFLFNDSRVTFTNFQSVQNITS
RFPKDTAYVLIYRKQEELGAQAGDSQTTVHGSRFNGEPPLHKDLMDAITKDNKLFLQEQE
LNARARALQAASAPCSFRPNGSDDNEPPGSCGPSGGGGGGGGGFSTVSRLVF
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atggataagattctggaaggtctggtgagctcgtctcacccggtccatgttaagcgagcc
atagtgaagatggtggtggaggcggctgagaaagaagtgaccccggatcagtgtcaggcc
ctgtaccatctgactgcacgcctcatcctgctcggcgaggacgccttccagcggcaggtg
ggtctccaggtgcaggaagcctacgcgcgataccaccgcgacgagtttgcccggttcctc
agtaaagattacgtcctggagctgctgcgtcagggctacggccctctggacccccgtgat
ctgaccatactggacttcctgcatggctgcctgaggctcctcatcagctgcccggctgtg
ctcgagctcgccccgacgctgcagaccgaggtcctgcgcatggtgtgcgagcgacccaac
gccacgttctgcagcaaactcgccacgctgctcagcgactttccccagtgtgtgccgcgc
aacaaagccgcagtgccgttttgccaacagctggtgcgcacgttcgcacatcttcagtgc
tcagcggccgaggaggcggagttgagacgatacgttaggcaggtgggctgcgtggctgcg
ttgctgcagggcatctggaaggcagaaccagccacgattcttccctcactgcaggaagtg
ttcgctgttatctcctcaacagatccatcctttgagccatccattgctctggctagtctg
gtgcagcacatccccctggagatgatcaaagtcctcatcaagagcctcaccaccgaccaa
aatgtcaaggacgccagcatgacccaggccctcagcagaatgatcgattggctctcatgg
ccgctggccaatcacgtagacatctgggttatcgctcttctgaaggggctggctgccgtg
cagaagttcaccatcctcatcgatgtcactttgttgaaaatcgaactggtctttaatcgt
ctgtggtaccccatagtgagaccgggagcattatcagtcctctctcacatgctgctgagc
ttccagcactcaccagaggccttccacctggtggtccctcacgtggtcccgctggtgaag
tctttgcaaagcgacggccttcctaccagcaaagccttcctgctgcagttcaccgagctc
atccactgcatgatgtaccagtactctggctttcctgacctctatgacagcatcctggaa
gtcattaaggacctccctaaacccggtgaagagaagatcaagtatgtgctgaatcaaagt
gcctggacctctcagtcgaattctttagcctctggactgttgaggctttccggcaaatcg
gagacagggaagacgggacttgtgaacttgggcaacacatgttacctgaacagcatcatt
cagatgctgttcatggctacagatttcagacggaacgtgttatctctgaacctgaacggc
tcgaattcgctaatgaagaaactacagcttctcttcgctttcttggcgcatactcagcga
gcagcatacgcaccgaggggtttcctggaagcgtctcggccgccctggtttacagccggt
tcacagcaggattgttccgagtatctacgcttccttttagacaggctacatgaggaggag
aaggatctccgagctctccagacagcccatcccaagaccgtgtcctctgataccgagggt
aacaatgaggcaaaagctcagaatgtgaccgaaacgccgtctcattatcagactaaagat
ctggacactggtgatgacagacggactctggtggagcgaatgttcggaggtcgtctttcc
acgagcatccgctgcctgcagtgccacagtgtttctgagaaagaggaaccgtttactgat
ctctctcttgctttttgcccatctggaatcacgggctcctcaacagctcagttccaccag
agggcagtaaacggcggcagcgagaaccccgaaggcactgcaaaggacgaacgcagcgta
gaaccccccaagaccgaggcggcgctgtccctgtccgatctgctcgagtatttcctggca
ccagagatcctagaggaggagaattgttacttctgcgaacgttgcggctcgctgcagcgg
gcggaaagggccatgcacgtggcgacagcccccgagtacctcgtcctcactcttttacgc
ttctcgtatgacgcgaggtgccacgtgcggcacaaaatactggacaacgtaggtatcccg
ctgcacgtgcacctgcctgttcaccagcaccactcttctgcatcttcaccgtcttcgtcc
tcaacgtctccaccatcggtgcaaatggactctccagggagttgtgaaaacttggccaag
aagttgaaaccttcccataaagagaaagaggaggaagacaaaggattaacggacaggggg
aaaagggaccgggagtcaggagtacgacgtgtaccttatgtcctgtgttccgtcgtgatg
cactctgggatgtcgtcagagagcggccactactattcgtacggcaggaacttgagcagt
ccgtcagccgggaattctttcaagtgtccggaatcggattccggtatcggactttcagag
ggctccacggcttcgcaggaagtactggagcgtgcaggggaggactccagggactggttc
ctgttcaacgacagcagggtgacctttactaacttccagtccgtgcagaacatcacgagc
cgcttccccaaggacacggcctacgtcctgatttacaggaaacaggaagagctcggagca
caggctggggattcacaaactaccgttcacggctccaggttcaatggggagccacctctt
cataaagatctaatggatgccatcaccaaagacaacaaactcttcttacaggagcaggag
ctcaacgccagggctcgtgctctccaggccgcctcggctccctgctcatttcgacccaac
ggctcggatgacaacgagcccccgggaagctgtgggccctcgggtggaggaggtggtgga
ggaggtggtttcagcactgtcagcagactggtcttttga
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