Silurus meridionalis (southern catfish): 124399582
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Entry
124399582 CDS
T08004
Symbol
pold2
Name
(RefSeq) DNA polymerase delta subunit 2
KO
K02328
DNA polymerase delta subunit 2
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03030
DNA replication
smeo03410
Base excision repair
smeo03420
Nucleotide excision repair
smeo03430
Mismatch repair
smeo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124399582 (pold2)
03410 Base excision repair
124399582 (pold2)
03420 Nucleotide excision repair
124399582 (pold2)
03430 Mismatch repair
124399582 (pold2)
03440 Homologous recombination
124399582 (pold2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smeo03032
]
124399582 (pold2)
03400 DNA repair and recombination proteins [BR:
smeo03400
]
124399582 (pold2)
DNA replication proteins [BR:
smeo03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
124399582 (pold2)
DNA repair and recombination proteins [BR:
smeo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
124399582 (pold2)
MMR (mismatch excision repair)
DNA polymerase delta complex
124399582 (pold2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
DNA_pol_D_N
Motif
Other DBs
NCBI-GeneID:
124399582
NCBI-ProteinID:
XP_046726557
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All DBs
Position
17:complement(1064994..1069403)
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AA seq
498 aa
AA seq
DB search
MFRHNRKWTLCEAFRARSQSSVRCLQLSVGVMFSDVMVQKETLLRPPSSENPLFEREEAS
YSSCSECFHLGERSFSRQYAHIYASRLMQMRQILSDRAQQKWGLEVPIRKLCDLQTGDRC
VIVGTLFKSMELQPSILKEISEEHNLLPQPPRTKYISQSDELILEDELQRIKLEGKIQTA
KFVTGSVIAVLGAEKNDGKFTVEDFCLADLPPQTPPEPLKADRFVLLASGLGLGGNGAES
MLGLQLLVDMVSGHLGDVGEQSGAASISRILLAGNLLSRSTQDKDSSTKAKYLTKKTQAG
SVEAIRLLDELLVQLVASVAVDVMPGEFDPTNYTLPQQPLHTCMFPLCSSYRTLQLVTNP
YRATVDGVCFLGTSGQNVSDIVKYSSVDDHLEILENTLRLRHIAPTAPDTLGCYPFYQKD
PFILSECPHVYFSGNAPSYQSKRVTGPEGQEVLLVTVPEFSSTQTACLVNLRTLDCEPIR
FTTFSAEDDEENEMNISH
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtcataaccggaagtggacgctgtgtgaagcgtttcgcgcgagatcccaaagc
agtgtccggtgtttacagctttcagttggagtcatgttctcagacgttatggtgcagaag
gagacattgctgcgtcccccgagctcagagaatcctctgtttgagcgagaggaagcttct
tactcaagctgttcggagtgtttccatctcggcgagcgcagcttcagccgtcagtacgct
cacatctacgcctcacgcctcatgcagatgcggcagattctgagcgacagggcgcagcag
aaatggggtctggaggtgccgatcaggaagctgtgtgatctgcagactggagacaggtgt
gtgatcgtaggaacgttgttcaaaagcatggagcttcagccatccatcctgaaggagatc
agcgaggagcacaacctgctccctcagcctcctcgtaccaaatacatcagccaatcagac
gagctcattctggaggacgagctgcagaggatcaagctggaggggaaaatccaaaccgcc
aagtttgttaccggaagcgtgatcgctgtcctgggtgctgagaaaaacgacgggaagttc
acggtggaggatttctgtctggctgatctcccgcctcagacgcccccagagcctttaaag
gcagacaggttcgtgctcctggcctcgggtctgggtctgggcgggaacggagcagagagc
atgctgggattgcagctgctggtggacatggtgtcgggtcacctgggcgacgtcggggag
cagagcggtgcggcgtccatctctcgcatcctgctggccgggaacctgctgagccggagc
acgcaggataaagactccagcacgaaggcgaagtatctgacgaagaagactcaggcagga
agtgtggaggccatcaggcttctggatgagctgctggttcagctggtggcctctgtcgca
gtagacgtgatgccgggagagtttgaccccactaactacaccttgccccagcagcccctg
cacacctgcatgttccctctgtgcagctcataccgaaccctgcagctcgtcactaacccg
tacagggccacggtggatggagtatgtttcctggggacatcagggcagaacgttagtgat
attgtgaagtacagcagcgtggacgatcacctggagatccttgagaacacactgcgactc
agacacatcgctcctacagcgccggatacactgggttgttaccctttctaccagaaggac
ccgttcatcctgagcgagtgtcctcacgtgtacttcagtggaaacgcgccgagctaccag
tccaaacgagtcacaggtcctgaaggtcaggaggtgctgctggtgacagtcccagaattc
agcagtacgcagacggcctgtctggtgaacctacgcacgctcgattgcgagccaatcaga
ttcaccaccttttctgccgaggacgacgaagagaacgagatgaacatcagccattaa
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