Silurus meridionalis (southern catfish): 124399592 Help Entry 124399592         CDS       T08004                                  Symbol dmxl1 Name (RefSeq) dmX-like protein 1 isoform X1   KO K24155   rabconnectin-3a Organism smeo  Silurus meridionalis (southern catfish) Pathway smeo04142   Lysosome Brite KEGG Orthology (KO) [BR:smeo00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome     124399592 (dmxl1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:smeo04131]     124399592 (dmxl1) Membrane trafficking [BR:smeo04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     124399592 (dmxl1)  Endosome - Lysosome transport   Acidification regulators    Rabconnectin-3 complex     124399592 (dmxl1)    RAVE complex     124399592 (dmxl1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Rav1p_C Beta-prop_THOC3 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_WDR5 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR36-Utp21_1st Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_IFT140_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WD40_Gbeta EIF3I Beta-prop_DCAF4 Beta-prop_EML PEP5_VPS11_N Beta-prop_CAF1B_HIR1 Beta-prop_VPS8 PTE Motif Other DBs NCBI-GeneID:  124399592 NCBI-ProteinID:  XP_046726566 LinkDB All DBs Position 17:complement(14313504..14352798) Genome browser AA seq 2985 aa AA seqDB search MNLHQVLTGAVNPGDNCFSVGSINNVPFTAYASGCDIVILGSDFERLQIIPGAKHGNIQV GCVDCSQQGQIAASYGNIVCIFEPVLLSQKEKMQTKLNYHWQTTGQFILQSIAHNIAWSP TGTSLLTGSSCLQLWSNLKLCGGAQEEMGGDSLSSWRSIWQCKTASPVHLIKFSPDGEFF ATVGQDDCLVKVWYSTGKWQFDAAKLFSPPEHNPQGKPDFSFIYLAHPRSVTGFSWRKIS KYIPRGAVCNVLLTCCKDSVCRLWAETLLPSDCLLSGLRQNHGSSSNDKLKSSNIKKAHY NNKGQSRNLPEPTMAELSRGPVRGLAHARLLPEQQNKHQTHRATIAHANALCHFHIAASI NPATDIPLLPSISSLSGSDDEEPGGPFNVHWLNNKELHLTLTMEVFLQQLRTNLELQNPT HDGCDEEDNSLDPENKEGETCCKNGASIPLPKAAVNHQVEVLLSDWNRGADMLFSIHPMD GSLLVWHIDWLDEYQPGMFRQAQVSFASRIPVAFPTGDAISLSRSIVMYACNKNVDLAIQ HGRQRPQGVQRTSSVLVGLGQSKQCPNGLRLSIFTPNVLMISKHSDGSLNQWSVSFAEGS AFSTVLSVSHKSRYCGHRFHLNDLACHSVLPLLLTTSHHNAKACNHIAHSGPGQVSPGQR NRFSLSAVPEDPNAVYSELILWRVDPVGPLSFSGGVSELARINSLHASAFSNVAWLPTLI PSNCLGVYGNSPSACFVASDGQSLRLYQAVIEAKKLLSELSNPEISKYVGEVFNIISQQS TARPGCIIELDAITEFQGKETQLLHVFEEDLILGNEKKDDCSQELLSAENSTFGPELFRA RFFLVVIEITQSRRSILHMWHLQLAAAPVTMGATSTPADKNAAASSLTCNLQNDSTSTLK SSLSKSSLRSACRLTLVKERVFSQELNLPDGVEVLSATPAAGHLSSSSLQPTGRAPYLLA TTCTDGTVRFWSCRVSDNDTSLYIWEEWPLLVEEGLTNSSALNFPDRPVSISCCHTGRVA VAYRDPKLSRHIKKPLIHVSIFQCESTGGSQWMLEQTLEMDVSSSLNINGSDKPVPVPSF QDRLISSEDCLNSNGKSLVHLDWVSREDGSHILTVGLGSKLYMYGLLSGKPPELGLSDTS REHCSSRFVLLRIVDLVSSVEGSLLIPVSLSWVRDGILVVGMDCEMHVYSQWQPAALAKS ALTTGDANVGSMTSLSTSLKQEGLSLQTSKKTLTRSMTSLAQKLSGKRTMYDLPAEMEDC GLFEAAHHLFPTLPQYHPVQLLELMDLGKVRRAKAILSHLVKCIAGEIVTLKDTNVNQER RLRSLTISASGSTSRDPKMFNKTESSDYTEIDSIPPLPLYALLAADDDTAPCAKAKTSSV SGDSGHGSSRADTYDELFQTSPVSLDDMDVLNGEEEDSKAKVIDLSKYSPTFFGPEHAQV LSSHLLHSSLPGLTRLEQMSLMALADTIASTSTDIRESQGKGQGGETLDECGLKFLLAVR LHTFLLTSFPPMHRAQLLCQGLSTCHYTWAFHSEAEEELLNMLPCMQKGEPTWPELRAMG LGWWLRSTNKLRRCIEKVAKASFQRNNDPLDAALFYLAMKKKAVVWGLYRSHKNVKMTAF FSNNFNEDRWRKAALKNAFSLLGKQRFQHSAAFFLLAGSLKDAVEVCLEKLQDLQLALVI SRLYESEFETSSTYKKILQRYVLGQDHQLPMHQDPFLRSMAYWVLDDYSHALDTLLEQPN PNADALHQGSLETSPCNPEVFNFYKYLRNHPLLLRCRFSSSDKAKAGLTGQATMADSISL TERRLFFTTANAHLQAGCPMLALDVLSKMPKVIKKSKMLHNQEKPSPTFSGPDNSDSGSG KDQASTLDWSQPMFNGFGSVSDTLSSPQEDHSHSDSVLSFDWSQPSMTLQDESLELKWES DKEESEEEEAGLAMKKIQPDSSAFLCDASASTSVSTDVTVDNSLVLFDDILAARLKFISC LKMLTAELRTLSTGYELDGGKLRHQLYHWLEREVKALQKCCGYNPYLQQVAGTISVEPGQ VSGASGDDQEYQGTAEQVREVLHRRRLWLQRNQPLLRIFLSYCILHGSHGGGLASVRMEL ILLLQESQQDDSFQVPVQPQASVPLLLACTASSKTVVANPIVHLTNLAHDILHIINAMDS PPHPDVINNEIYVMHTLAASLSACIYQCLCDGHNYSHINQFTGTVYESILLSHHHPVRTL SMDEAVIPNTSPAQWPGVSSLVRLLGATAEENQPSVGVLLCEILTAVFLSLFVHGLATHS SNELFHIVAHPLNSKLWVAVFGGGARLTVTGKSSPALAPAVMEDQEWKQKHFRQHSSRSS SREAADNPVSHSPIVEQEASIFKERFVPPELSIWDYFIAKPFLPPSVSQVEYDSEESQGS DEEEEEEEEEDGFGDTICPLQEHSNNNSYSWCLMRVAMVKLVLGSLKSFYPMAGFDLLDL PVCSPLCHSVMKTLQRWEQVLLKRLEIFGGPPSEYISTHPIDGSMASGPALLRHKALFEP SNTPFRSHHHSALSVKRLWQYLVKQEEVQETFIRNIFTKKRDQKESVEDCTDSMRYSGME QLGSNQIEADLGYPGGKARIIHKESDIITAFAINKANRNCLVIASTHDIQELDVSSILAT QILTWIDDEAETEAKGDDFLVVQTRDDFTALHGTTPYTRSSPGTPINMPWLGSHQTGRGA AMLIKRNINNVRRMTSHPTLPYYLTGAQDGSVRMFEWGHSQQIICFRSPGNSRVTRIRFN YQGNKFGIVDADGALSLWQTNTSGNTPKPYLTLQCHNKTAHDFVFVGSSSLIATAGLSTD NRNVCLWDTLVTPSNSLVHGFSCHESGATVLALAPKQQLLLSGGRKGWISVLDLALKIQR QSFQAHDSAVKALAVDATECCFISGSAEGNIKVWNMLTQGLLHMFPNEHARQSIFRNLGT GVMQLETATGNHMFSCGADGTMKMRVLPDHISTYTNNLKNVKFII NT seq 8958 nt NT seq  +upstreamnt  +downstreamnt atgaatttacaccaagtactcactggggccgtcaaccccggagacaattgtttctctgtc ggaagcataaacaacgtgccgttcacggcctatgcttctggctgtgatattgtaattctg ggaagtgattttgagaggcttcagatcatcccaggtgccaaacatgggaacattcaagtc gggtgtgtggactgctctcaacaaggacagattgctgcatcctatggaaacattgtttgc atatttgagcctgtgttgttgagccaaaaggaaaagatgcaaacgaaactgaactatcac tggcaaaccacaggccagtttattttacagtctatagcacacaacattgcctggagcccc acaggtactagtcttttgactggttcaagttgcctgcagttatggtccaatctgaaactc tgtggtggtgctcaagaggagatgggtggtgactctctgtcctcttggaggtctatatgg cagtgcaagactgcgtcacctgttcacctcattaagtttagtccagatggagagtttttt gccacagtggggcaggatgactgtttggtaaaagtgtggtatagcacaggcaagtggcag tttgatgccgcaaagctgttcagtccacctgaacacaaccctcaggggaagccggacttc tccttcatctacttagctcatccacgctcagtcactggcttctcctggagaaaaatcagc aaatacatacccagaggtgctgtgtgtaatgtgttactgacctgctgtaaagacagtgtg tgtcggctatgggctgaaactctgctgcccagcgactgcctgctctctggactgagacaa aatcatggtagcagcagcaacgataaactcaagtccagtaacattaaaaaggctcattac aataacaaaggccagagtcgaaacctgcccgagcccaccatggccgaattgagtcgggga ccagtaagaggtttggctcacgcaagacttctccctgagcagcagaataagcatcaaacc cacagagccacgatcgctcatgccaatgcactgtgccactttcacatcgctgctagcatc aacccagccacagatattcctctgctgccttccatatcatctctgagcggttcagatgat gaggagcctggtggacccttcaatgttcactggctcaacaacaaagagctgcacctgact ctcaccatggaggtgttccttcagcagctcaggaccaatttggagcttcaaaacccaaca catgatggctgtgatgaggaagacaattctctagaccctgaaaacaaagaaggagagact tgctgcaaaaatggagcctcaattcctctccctaaagcggcagtgaatcaccaggtggag gtgttactgagtgactggaacaggggagcagacatgctttttagcatccaccccatggac ggatctctactggtgtggcatattgattggctggatgaataccagcccgggatgttccga caggcacaggtgtctttcgcatctcgaattccggttgccttccctacgggtgatgccatc tctctcagccgtagcatagtgatgtatgcctgtaacaaaaatgtggatttggccatccaa catggtcgccagcgtcctcaaggcgtacaacgcacttcttcagttttagttggcctgggg cagagcaagcagtgtccgaacggcctgcgcctgagcatcttcacgcccaatgtactgatg atctctaagcattctgatggctcactaaaccagtggtcagtgagctttgctgagggctca gccttctccactgtgctcagcgtctcgcacaagtcacgctactgtggccatcgcttccac ctcaatgacctggcctgccactctgtactgcccctgcttctaaccacctcacatcacaat gccaaggcgtgcaaccacattgctcactcagggcctgggcaagtctctccggggcagaga aaccgcttttccttgagtgctgttccggaagatccaaatgcggtttatagtgaactaata ttatggagagttgatccagttggacccctgtcattttcagggggcgtttctgagctggct agaattaattcacttcatgcatcagccttctctaatgtggcctggcttccaactctcatc ccaagcaactgccttggtgtatatggcaactcgccaagtgcctgttttgtagcgagtgat ggccaatccttgagactgtatcaggcagttattgaggcaaaaaaactgttgagtgaactc tccaatcctgaaatatcaaaatatgtgggagaagtattcaacatcataagtcagcaatct actgcaagaccaggctgcatcattgagcttgatgccatcacagagtttcaaggaaaggag acccagttgttacatgtgtttgaggaggatctgatcttggggaacgagaaaaaggatgat tgttcacaggagctgctgtctgctgagaatagtacctttggcccggaactatttcgggca cgcttttttctggtggtgatcgagattacccagagcaggagatcgattctgcatatgtgg catctgcagctggcagcagcacctgttactatgggagctacctccacccctgctgataaa aacgctgcggcttcgtcattgacatgcaacttgcagaatgactcgacatcaacccttaaa tcatcacttagcaagtccagcctacgcagtgcctgtcgcctcacactggtcaaagagagg gttttcagtcaggagctgaaccttccagatggggtagaagttctatctgccacaccagcg gcaggccatttaagctcgtcgtctctgcagccaactggccgggccccatatcttcttgcc acaacctgtacagatggaactgtgcggttttggagttgtagagtctctgacaatgacacc tctctttatatttgggaggaatggcctttgttagtggaagaaggtctcaccaatagtagt gcattgaactttcctgacaggcctgtaagcatcagctgctgccacactggcagagtagct gtggcatacagggacccgaagctttcaagacatatcaagaagcccctcattcatgtgagc atattccaatgtgaatccactggaggatcccaatggatgttagagcagacccttgaaatg gatgtttcaagtagtctaaatatcaatggttctgataaacctgtgcctgtgcccagcttt caggatagattaatcagttctgaggactgtttaaatagcaatggtaagagtctagttcat ctggattgggtttccagagaggatggttcacacatattgactgtaggtcttggctccaaa ctgtacatgtatgggctgctgtcaggaaaacctcctgagctggggctgtcagacaccagc agggaacactgctcttcaaggtttgttctgttgcgtattgtggacctggtctcctctgta gagggctctttgctaatcccggtctcactgtcttgggttagagatggcattctggttgtg ggcatggactgtgaaatgcatgtctactctcagtggcagcctgcagcattagccaaatca gctctgacgacaggcgatgcaaatgttggcagcatgacctcactttccacatctttaaaa caggagggactaagtctccaaacatcaaaaaagactcttactaggtctatgactagtcta gctcagaagcttagtggtaagaggacaatgtatgaccttccagctgaaatggaagactgt ggattgtttgaagcagcacaccacttgtttcctaccttacctcagtatcatccggtgcag cttttggaactcatggacctaggcaaggtgcgaagggccaaagctattttgtctcatctg gttaagtgcatagctggagagattgtaactctaaaggacaccaatgtgaaccaggaacgt cgtctacgatcactcactatcagtgctagtggcagcacatccagggaccccaaaatgttc aacaaaactgagagctcggactacacagagatcgattccatccccccattgcccctgtat gctctgctcgctgcagatgatgatacagccccctgtgcgaaagccaaaacatccagtgtt agtggggacagtggtcatggttccagccgagcagacacctatgatgagcttttccagacc agccctgtgagtttagatgacatggatgtcttaaatggggaggaggaggattctaaggct aaagtcattgatttgtcaaaatacagtcccactttctttggacctgagcatgcccaggtt ttgtcaagccacctgcttcattctagcctacctgggctgacacggctagagcagatgtct ctcatggctttagctgataccattgcctcaaccagcacagacatcagggaaagtcaggga aaaggtcaaggtggtgagacactggatgaatgtggcttgaagttcctgcttgctgttcga ttgcacacttttcttctgacttcgtttcctccaatgcatcgtgcacagctcctttgccaa ggactgtctacatgtcactatacctgggcatttcactctgaagctgaggaggaactgctc aacatgttgccctgcatgcagaaaggagaacccacttggcctgaactgagagccatgggt ttaggatggtggctaaggagcactaataagcttcgcagatgtattgaaaaggtagcaaag gcttcttttcagagaaataatgatcccctggatgcagccctgttttatctggcaatgaaa aagaaagctgtggtctggggactgtacaggtcgcacaagaacgtgaagatgactgctttc ttcagtaacaactttaatgaggacagatggaggaaggctgcattgaagaacgcattctct ttgcttggaaagcagaggtttcagcactcggcagccttctttctgttggcgggttcccta aaggatgctgttgaggtttgcctggagaagttgcaggacctgcagttggcattggtgatt agcagattatatgagtctgaatttgagacctcttccacatataagaaaatccttcagagg tatgtgctgggtcaggaccaccagcttccaatgcaccaggatccctttcttcgcagtatg gcatattgggttctagatgattacagtcacgctttggatactttgctcgagcaaccaaac ccaaatgctgatgctttacaccaaggaagtctagaaacatctccttgtaacccagaggtt ttcaacttctacaaatacctcagaaaccatccactgctccttaggtgtcgtttttcatcc tcagataaagctaaagcaggactgactggacaagccaccatggcagactccattagtctc accgaaaggagactgttcttcactactgctaatgctcacttacaagctggctgcccaatg ctagcacttgatgtcctctccaaaatgcccaaagttattaagaaatccaagatgctacac aaccaagagaagccctcaccaacatttagtggtcctgacaattcagacagtggaagtgga aaagaccaggcctctacactagactggtcccaacccatgtttaacggctttgggtctgtc tcagacaccttatcttctccacaagaagaccacagccactcggactcggttttgagcttt gactggagtcaaccttccatgactttgcaagatgagtctttggagctgaagtgggaaagt gacaaagaagaatctgaggaggaggaagctggcttagcgatgaagaagatccaaccagat agctctgctttcctttgtgatgcttctgcctctacctcggtgtctacggatgtcactgta gacaactcccttgttcttttcgatgacatcttagctgctcgtctgaagttcatttcctgc ctgaagatgctgactgctgagcttcggactctctcgacaggttatgagctggatggtggc aagctgcgccaccagctgtatcactggctggagcgggaggtgaaggcccttcagaagtgt tgcggctacaacccctaccttcagcaggtggccgggaccatctcggttgaacctggtcaa gttagcggtgcctccggagatgaccaagaataccaagggactgcagagcaggtcagagag gtgctacacagacgcagactgtggcttcagagaaaccagccactactccgcatcttccta agctactgtatcctacatggttctcatggaggcgggttggcttcagtcaggatggagtta attctgcttttgcaggaatctcaacaggatgacagttttcaggtccctgttcagccgcaa gcatcagttcctctcctgctcgcctgcaccgcaagctccaaaaccgtggtggccaatcct atagttcacctgaccaacctggcacatgacatactgcacatcattaatgcaatggactct cctcctcacccagatgtcattaataatgagatctatgtaatgcacactctggcagcttct ctgtctgcctgtatctaccagtgcctctgtgacggacacaattacagtcatatcaaccag ttcacaggcacagtctatgagagcattttgctttctcatcatcaccctgtacgaactctc agtatggatgaagctgtcattcctaacacctctccagcccagtggccaggtgtcagttcg ttggtgcgtctcttgggtgcaacagcagaagagaaccagccgagtgtgggtgtgctcctg tgtgagatcctcacagctgtcttcctcagcttgtttgtgcatggcctggccacacactcc agcaatgagctctttcacattgtggcgcatccacttaacagcaagctgtgggtggctgtg tttggtgggggggctcggcttactgtaacaggaaaatccagcccagcattggcccctgct gtgatggaggaccaggaatggaagcagaagcatttcaggcaacattcttctagaagcagt tccagggaggcagcagacaacccagtcagccacagccctatagtagagcaggaagcatcc atttttaaagaacgctttgttcctcctgagcttagcatctgggactactttattgcaaag cctttcctgccaccatctgtaagccaagttgagtatgattcagaggaaagccaggggagt gatgaggaagaagaagaagaggaagaagaggatggttttggagatactatttgtcccctt caagaacattccaacaataattcttatagctggtgtttgatgcgcgtggccatggtgaag cttgtgctgggaagcttgaaatcattctatcccatggctggctttgatctcttggatctg cctgtatgctctccactgtgccactcggtaatgaaaacgctacagcgctgggaacaggtg ttactcaaaaggctggagattttcggtggaccaccctctgaatatatctccacacaccca attgatgggtccatggcatctggaccagctctcctcagacacaaggccttattcgaaccc tctaacacaccgttcaggtcccaccatcattctgcactttctgttaagagactctggcag tatctggtaaaacaggaagaagtgcaggagacttttattcgtaacatctttaccaaaaag cgggatcagaaagagtcggttgaggactgcactgacagcatgaggtattcagggatggag caacttggttccaatcagattgaggcagatctgggttaccctggaggcaaagctcgcatc atccacaaggaatctgacatcatcactgccttcgccattaacaaggctaatcgtaactgc ttagtaattgcgtcaacccatgacatccaggagctggacgtgtcctccattctggccact cagatattgacatggatcgatgatgaagcagagacggaagcaaaaggtgatgactttctg gtggtccagacccgggatgacttcaccgctttgcatggcacaacgccttacactcgcagc agtcctggcactcctattaatatgccctggttgggcagccaccagactggcagaggagca gcaatgctgattaaacgaaacattaacaacgtcaggaggatgacgtcccaccctacactc ccatactacctaacaggagctcaggatggcagtgtgaggatgtttgaatggggtcattcg cagcagatcatctgctttaggagccctggcaactccagggtgacgaggatcagattcaac taccaggggaataagtttggtattgttgatgcagatggagctcttagtctctggcagaca aatacttcagggaacacccctaaaccctacctgacattgcagtgccataacaaaacagcg catgactttgtgttcgtgggctcatcatccctcatcgccaccgctggcctttccactgac aacagaaacgtatgtctctgggatacattggtcacaccatccaacagtctggttcatggc tttagctgccatgagtctggtgccactgtgctggctcttgctcccaaacagcagctgctg ctcagcggagggaggaaaggctggatcagtgtgctggacctcgcacttaagatccagcgc cagagctttcaggcccatgactcggctgtcaaagcgttggctgtggatgccaccgaatgt tgcttcatcagtggctcggccgaaggcaacatcaaggtgtggaacatgttaacgcagggc ctattgcacatgttcccgaacgagcacgcccggcagtccatcttccgcaacctgggcaca ggagtgatgcagctcgagacggcaacaggcaatcacatgttttcttgtggtgccgacggc accatgaaaatgcgcgtcctgcctgaccacatcagcacttacaccaacaatttgaagaat gtcaaattcattatttag

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