Silurus meridionalis (southern catfish): 124399614
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Entry
124399614 CDS
T08004
Symbol
zgc:171572
Name
(RefSeq) protein bicaudal D homolog 2 isoform X1
KO
K18739
protein bicaudal D
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
124399614 (zgc:171572)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124399614 (zgc:171572)
04131 Membrane trafficking [BR:
smeo04131
]
124399614 (zgc:171572)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
124399614 (zgc:171572)
Membrane trafficking [BR:
smeo04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
124399614 (zgc:171572)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BicD
HmpF
ATG16
BICDL2_C
OmpH
HALZ
BRE1B
CCDC39
DUF1759
TBCA_PH
TPR_MLP1_2
Cubilin_N
Motif
Other DBs
NCBI-GeneID:
124399614
NCBI-ProteinID:
XP_046726619
LinkDB
All DBs
Position
17:complement(7691746..7737441)
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AA seq
836 aa
AA seq
DB search
MMLSTAEEMLAEIARLTGELHETTREKIQAAEYGLAVLEEKQALKQQYDELESEYDSVRQ
ELDQLREAFGQAHSNQRKVAADGESREESLLQESACKEAYYEQRVQELQTELRQARNTLT
NTLSENERMSAITQELRENSQVVELQRSRLRDEIKEYKFREARLLQDYSELEEENIALQK
SVSVLKQNQVEFEGLKHEIRRLEEDTQFLNSQLEDAVRLKEIAERQLGEALETIKTEREQ
KATMRKELSQYMNIGDSMYHNSLSISLDGLKFSEDVPNNDEPIHGYENGFDKISEAEDNR
MSTPKKSQLFCPAPSLVDDLLSELNLSEIHKLKQQLVQVEREKVTLLSTLQDSQKQLEQA
HGALSEEHEKVSRLTENLNAIRKLQASKERQSALDNEKERDSNEDSDYYEVDINGPEILE
CKYKVAVSEVGHLKDELKTLKSEYSACRSQLEEQRSQLENQVASLRSELSTLECSSRTER
EQLARMEKELRRASEAAGESQGSLSVAQDELATFSEELANLYHHVCMCNNETPSRVMLDF
YREGKANVGTNSRASPEGRGRRSPILLTRGLFPSPEAESPSPVSSPVADPRKEPMNIYNL
VAIIRDQIRHLQLAVDRSTELSRQRLASAELGSTSDRDHEASVEEILKLKSLLSTKREQI
ATLRTVLKANKQTAEVALANLKSKYENEKAMVTETMMKLRNELKALKEDAATFSSLRAMF
ATRCDEYVTQLDEMQRQLAAAEDEKKTLNSLLRMAIQQKLALTQRLEDLEFDHEQVRRGG
SNSKTKSASSRARAAHNPAQSHVSPPLSATCGGRAEPDSLLRTPVFCSEKYKIYCE
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgtcaaccgcggaggagatgctggccgagatcgcgcgcctcaccggcgagctg
cacgagaccacgcgcgagaagatccaggcggcggagtacgggctcgcggtgctggaggag
aagcaggcgctcaagcagcagtacgacgagctggagagcgaatatgacagcgtccgacag
gaactggaccagctccgagaggcattcggacaggctcactccaaccagaggaaagtggca
gctgatggtgagagtcgggaggaatctctgcttcaggagtcagcatgtaaggaggcgtac
tacgagcagcgcgtgcaagagctacagaccgagctcaggcaggcgaggaacaccctcacc
aacacactgtctgagaacgagcgcatgtccgcaatcacccaggagctcagggagaacagt
caggtggtggagctgcagaggtcccgactccgtgacgaaatcaaggagtacaaattccgc
gaggctcgtctgctgcaggactatagcgagttggaggaggaaaacattgcgctgcagaaa
tccgtgtctgtgctcaaacagaaccaggtggagtttgaaggcctgaagcatgagattcgt
cgcctggaggaggacacgcagttccttaacagccaactggaggatgccgtccgtctgaag
gagatagccgagagacagctgggagaagctctggaaaccatcaagaccgagagggagcag
aaggcgactatgaggaaggaactgtctcagtacatgaacatcggggactccatgtaccac
aattccttgagcatctccctggatgggttgaagttcagcgaagatgtgcctaacaacgac
gagcccatccatggctatgaaaacggcttcgacaagatctccgaagccgaggataaccgg
atgtccacgcccaaaaagagccagctgttctgtccggcgcccagcctcgtggacgacttg
ctgagtgaactcaacctttccgaaatccataagcttaaacaacaacttgtgcaggtggag
cgggagaaggtgaccttgctatcaacactgcaggactcacaaaagcagctggagcaggcc
cacggggctctgtcagaggagcacgagaaggtgagccgcctcactgagaatctgaatgcc
atacgcaagcttcaagccagcaaggagcgccagtcagccctggacaacgagaaggagcgt
gacagcaacgaggacagcgactactatgaagtggacatcaatgggcctgagatcctggag
tgcaagtacaaggttgctgtttctgaggtgggtcacctgaaagacgaactgaaaactctg
aagtctgaatactctgcttgccgctcgcagcttgaggagcagcgtagccaattggagaac
caggtggcatcacttcgctctgagctgagcaccctggagtgcagcagccggaccgagcgt
gagcagctggcacggatggagaaagagttacgtcgtgccagtgaggcagccggtgagagc
cagggaagcctgagcgtagcacaggatgagctggctacgttcagcgaggagctcgccaac
ctttaccaccacgtatgcatgtgcaacaatgagacccccagccgtgtcatgctcgacttc
taccgcgagggcaaagccaatgttggcaccaacagtcgtgccagcccagagggtcgtggc
cggcgttcacccatcctgctgacacgcggcctcttcccctcccccgaggcagaatcacca
tcccctgtctcttccccagtggctgatccacgcaaggaaccaatgaacatctacaacttg
gtggccatcatccgtgaccaaatcagacacctgcaactggccgtggatcgcagtacagag
ctgtctcgtcagcgcctagcctcggcagagcttggttccacttctgaccgtgaccacgag
gccagcgtggaagagatccttaagctcaaatctcttctcagcaccaagagagagcagatc
gccaccttgagaacggtcctcaaagccaacaagcagactgctgaggtagcactggccaat
ctgaagagcaagtacgagaacgagaaagccatggtgaccgagacgatgatgaagctccgc
aacgagcttaaagccttgaaggaggatgctgccaccttctcctcccttagagccatgttt
gccacccgctgtgatgagtacgtcactcagctggacgagatgcagaggcagctggcagcg
gctgaagatgaaaagaagaccctgaactccctccttcgcatggccatccagcagaagctg
gccctcacgcagcgtctcgaagatctagagtttgaccacgagcaggtgcgccggggcgga
tccaacagcaagaccaagtctgcctcctcccgcgccagggctgctcacaaccctgcgcag
tcacatgtaagtccacccctcagtgccacctgcgggggtcgcgccgagcccgacagcctc
ctgagaacacctgtgttctgcagcgaaaagtacaagatctactgcgagtaa
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