Silurus meridionalis (southern catfish): 124399645
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Entry
124399645 CDS
T08004
Name
(RefSeq) thyrotropin-releasing hormone receptor
KO
K04282
thyrotropin-releasing hormone receptor
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04020
Calcium signaling pathway
smeo04080
Neuroactive ligand-receptor interaction
smeo04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
124399645
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124399645
04081 Hormone signaling
124399645
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
smeo04030
]
124399645
G protein-coupled receptors [BR:
smeo04030
]
Rhodopsin family
Peptide
Thyrotropin-releasing hormone (TRH)
124399645
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srx
7TM_GPCR_Srw
V1R
Motif
Other DBs
NCBI-GeneID:
124399645
NCBI-ProteinID:
XP_046726679
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All DBs
Position
17:20310319..20316826
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AA seq
401 aa
AA seq
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MENATPSAMTNFTISEPLSNMPENSLEVQVITILLSLLICGVGIAGNIMVVLVVLRTKHM
MTPTNCYLVSLAIADLIVLLAAGLPNISEVVSSWIYGYAGCLCITYLQYLGINVSSCSIT
AFTVERYIAICHSIKAQFICTVSRAKKIIGCVWIFTSLYCIMWFFLVDIHEMVYANGVVV
RCGYRVSRNLYMPIYFLDFTLFYVIPLVVATVLYGLIARILFMNPLPANLSERGNDSIHQ
GRMNSTVKVSCKPNKGAVSSRKQVTKMLAVVVVLFALLWMPYRTLVVVNSLMDPPYLNTW
FLLFCRMSIYTNSAINPIIYNAMSQKFRTAFKKLCHCKTTISKEKASKHNAPVYYSVIKD
SSSPEYETEQEDVSTYSVSAKRVNFSAQTEEATAQGMFSIA
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggagaatgcaactccgagtgctatgactaacttcacaatttcggaacctttgagcaat
atgcctgagaactcactggaggtccaagtcatcactatactcctgtcccttctcatttgt
ggggtgggaatagctgggaacatcatggtcgtcctggtggttctccggaccaaacacatg
atgacaccaactaactgttatcttgtcagcttggccattgctgacctcatcgtccttctg
gcagctggattgcccaacatctctgaggtagtttcttcttggatctatggctatgctggc
tgcttgtgtatcacttacctgcagtatctgggcatcaatgtctcctcgtgctccatcaca
gctttcactgttgagcgctacatcgcaatatgccactccatcaaggcacagtttatatgc
accgtatccagagctaaaaaaatcatcggctgcgtttggattttcacctcactctactgc
atcatgtggtttttcctcgttgatatacatgagatggtttatgccaacggtgtcgttgtg
aggtgtggttatcgggtctcgaggaacctctacatgccaatttactttttggacttcacg
ctgttttatgtcattcctctggtcgttgctacagtactttacgggttgattgctagaata
ttgttcatgaatcctttaccagcaaatttgtctgaaagaggaaatgactcaatccaccaa
ggacgaatgaacagcacggtgaaagtctcctgcaagccaaataagggtgcagtgtcctcc
agaaaacaggtgactaaaatgctggcagtggtggtggtattgttcgctctgctctggatg
ccctaccgtaccctggttgtggtgaactctctcatggaccctccgtatctcaacacgtgg
tttctgctcttctgccgcatgagtatctacactaacagtgccatcaaccccatcatatac
aacgccatgtcgcaaaaattccgcacggcttttaaaaagctctgccactgcaagaccaca
atcagtaaggagaaggcatcaaaacacaatgccccagtctactacagtgtcattaaagac
tcctcaagtcctgaatacgagacagagcaggaggacgttagcacatacagtgtatctgcc
aagcgagtgaacttttcagcccagactgaagaagcaactgctcaggggatgtttagcatt
gcttaa
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