Silurus meridionalis (southern catfish): 124399649
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Entry
124399649 CDS
T08004
Symbol
notch2
Name
(RefSeq) LOW QUALITY PROTEIN: neurogenic locus notch homolog protein 2
KO
K20994
Notch 2
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
124399649 (notch2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
EGF_2
Ank
Notch
NOD
NODP
Ank_5
Ank_3
Ank_4
EGF_3
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
124399649
NCBI-ProteinID:
XP_046726688
LinkDB
All DBs
Position
17:25081830..25134077
Genome browser
AA seq
2567 aa
AA seq
DB search
MGRFPGVSSGKIILFVVSCVHLSYGLQCVDLVNPCVNNASCVTFTNGTGYCKCPTGYLGE
YCHHKDLCQPEYCLNGGSCRMVSGLPSALVCACPPGFNGPRCEQQINSSCYPKNPCKNGG
TCSLLSTDLYICKCALGWTGKHCDLVDSCVSSPCANGGACTSLRDGTFFCTCPSGYDGSR
CLNDVDECALEPAKCLNDGVCVNVPGSYRCNCATRFTGSNCEKLYIPCSPSPCMNGGTCR
QTSETSYWCHCLPGFNGTNCEVNIDDCPDHQCQNGGTCMDGVNTYNCQCPPEWTGQFCTD
DVDECRLQPNTCQNGGTCSNTPGGYTCVCVNGWSGPDCSENIDDCAVGPCSAGSTCLDRV
ASFFCSCPFGKTGLLCHIDDACISNPCRKGSQCDTNPVNGKFNCNCPFGYRGSTCNDDIN
ECTIVNPCEHGGTCENTEGSFICKCARGYMGPRCEQDVNECGSNPCQNDATCLDQIGDYT
CICMPGFEGVHCEIEVDECTSSPCLNNGKCRDQVSRFVCECPQGFTGEMCQIDTDECAST
PCQNGAKCIDQPNGYECECAEGFTGTLCAENIDDCNPKPCHYGVCKDGIGMHTCECYPGY
MGQICSEQINECLSNPCQNGGRCIDRVNKYLCHCLPGTSGVNCENNPDECISNPCQHGAC
VDGINKYKCECEPGYTGERCSVEIDECSSNPCLSGGTCVNKVNGFECQCPPGTHGLLCHS
GADHCAPQPCRNGKCEEVQNGYRCVCFPGYEGQNCEQEKNECESNPCQHGAACLDAVNSY
TCKCLLGYTGVNCEININECQSNPCENKGTCIDGINSYTCNCPLSYTGSHCEVELVPCAS
LPCQRGGVCLPSSDYTSYTCKCPSGWQGAQCTEDIDECKKNPCLNGAHCLNNQGSYMCSC
QPGYSGVNCQTNIDDCSSNPCINGGSCVDKVGRFSCECRPGFSGERCEEEVNECESSPCR
HGGTCTDFVNSYTCQCRPGFSGINCERNIPECTETSCLNNGTCVDGINQFTCRCRPGFTG
SFCQYEINECESQPCRNGGTCNDGLGTFHCSCPMEYTGRFCQSLADLCRNIQCKNGGECV
QQETKWSCRCPQDWSGLYCDIPNISCRNAALKKGVAVEHLCQNGGKCENKDNTHYCLCQM
GWTGSYCETGIDECLSSPCRNGGTCMDYQGGYDCKCKPGYQGVNCDYDVNECQSNPCRNG
GTCVNLVNHFYCSCPPGTKGPQCEVDIDECSTEFGPPCLNGGRCLDGIGQYKCVCPPGFT
GERCEGDINECRPYPCHKPGSIDCVQLANDFQCRCRLGYTGRLCESMVDLCQSKPCHNGG
RCSMNTSSVHGYSCSCPPGYTDFNCGEIVGRSCASLRCQNGGHCQESQSSRVQCVCPSGF
SGPLCENVTPSCSCQNGGVCMKEMSKPYRYFCHCLVGYSGEHCQHRDPSCPYVECQGRSS
DGVCDPQCKTLECEWDGGDCTLKRLNPWENCTANVPCWEFFHNKRCDPECNVAGCLFDSF
ECHSNPTSPSKCKYDEYCRDHYQNGRCNEGCNTEECGWDGLDCSSDKPPQLADGTLVIVV
LLQPTELLGDMKGFLRSLGMLLHTNLRVKRDDKKELMIYPYYGADHEDSHAGTRTAKRLG
KRELGNEIIGSKVYLEIDNRQCTQTSTECFSSTDLAASYIAAEALKAELQYPVLSVESES
GFIVQPPANPLFYLVGVAVAIMLLILILGVLVAKRKRKHGLLWLPDGFLAKKDSKRREPV
GQDDFGMKSLQKSQMDGSAGHHWPEEDLLPKKPRQEDKPLLGVDAGVDRREWTLQHCKAA
DITLTPPQADIDIDCLDVNVKGPDGFTPLMLASLRGGSSPECVSVLAEEEEESGVDEPGT
NIISDLISQGATLNSQTERTGETALHLAARYARADAAKRLLDAGADPNAHDNMGRTPLHA
AIAADAQGVFQILIRNRATELDSRMNDGTTPLILAARLAVEGMVEELVHCHADVNAVDDH
GKSALHWAAAVNNVEATLVLLKNSANRDMQDNKEETPLFLAAREGSFEAAQVLLDHYSNR
DITDHLDRLPRDTAQERMHHDIVRLLDQYNLVHSPHSGPNHVGNGGGGHSMVCNSNGVIR
MRLGQQNKKNRRGGATKLGGPNGTGGGVKDLKDMKTKRRKKPAGGETTGLAASSGNVATV
TANTNGAKGAATAGTGALSESSVTMSPVDSLESPHSYTADPAGATNMAKSPPLMNSPSTR
PLLPPVSHMLGQQQSWVGVPKHGYSTPHVFSHMLSHQMTPGHSGLPQPHHGSGILRPVNV
SVSREQLPSIVTFQMMGSXNQAHHKPNPQAGMQVSQAHTQGLNHMHCSPEMMYPMQETGP
QHGILRLHGHGHESQVRQVTLYQPQLQSPVDKYPTPPSHRSYASGAGSEVVTTSGQGSEV
TTPGHGAPPSSEHPYLTPSPESPDPWSSSSSPHSHSDWSDVTTSPHGALHTHAHPHTHAH
LTFQSRLPSCSRSPPSQRSRHLSSKPAAVCTRNSTEELLGADCCVYMQFNCINMLPVERQ
NLFLLSHTALYFLFFIFYADSGFYMQLFFLLMQRTNLSRCSVQLWMD
NT seq
7704 nt
NT seq
+upstream
nt +downstream
nt
atgggccgatttcccggtgtatcttcgggcaaaatcattttattcgtcgtttcctgcgtt
catctttcatacggcctgcagtgcgtggatctcgtgaacccatgtgtgaacaatgcgagc
tgtgtcaccttcaccaacggaacgggatactgcaagtgtcctacagggtacctaggtgag
tactgccaccataaggacctgtgtcagccagaatactgtttaaatggaggaagctgtagg
atggtgagcggtctgcccagtgcccttgtgtgtgcgtgtccgcctgggtttaatggccca
cgctgtgaacagcaaatcaactcctcctgttaccccaaaaacccttgcaagaacgggggc
acctgttcccttctgtctactgacctgtacatatgcaagtgtgcactaggatggacaggc
aaacactgtgatctagtggacagctgtgtgtcttctccgtgtgccaacggaggagcctgt
acctctcttcgtgatggaacgttcttctgcacgtgtccttctggctatgatgggtctcgc
tgcctgaacgacgtagacgagtgcgcactggagccggcaaaatgccttaacgacggagtg
tgtgtgaacgtccctggctcgtaccgatgcaactgcgccaccaggtttacaggctccaac
tgcgaaaagctgtacattccctgttctccgtcaccctgcatgaacggtggaacctgcaga
cagacgtctgagaccagctactggtgccactgtcttccaggattcaatggaacgaactgc
gaggtgaacatcgacgactgtccagatcatcagtgtcagaatggaggaacctgcatggac
ggagtgaacacctacaactgccagtgtcctcctgagtggactggtcagttttgcacggac
gatgtggatgagtgtcgcctgcagcccaacacctgtcagaacggcggcacgtgcagcaac
acgcccggaggctacacctgcgtgtgtgtgaatggttggagcggcccggattgctccgag
aacatcgatgattgtgctgtgggaccctgctcggccggctccacctgcctcgaccgcgtc
gcctcctttttctgcagctgccccttcggcaaaaccggtttgctgtgtcacatcgatgat
gcgtgcattagtaacccgtgcaggaagggctctcagtgtgacaccaatcccgtgaatggc
aaattcaactgcaactgtcctttcggatacagaggcagcacctgcaacgatgacatcaac
gaatgcaccatcgtgaacccttgtgagcatggtggcacgtgtgagaacaccgaaggctcg
tttatttgtaagtgtgcacgtggttatatgggtccccggtgcgagcaggacgtaaatgag
tgcggctcaaacccatgccagaatgatgccacttgtctagaccagatcggtgattacacc
tgcatctgcatgccaggctttgaaggagtccactgtgagattgaagtggacgagtgcacc
agttctccatgcctcaacaatggaaagtgtagggaccaggtcagccgttttgtctgcgag
tgtcctcagggcttcacaggagagatgtgccagatagacactgacgagtgtgcgagcacg
ccctgccaaaacggagccaagtgtatcgatcagcccaacggatatgagtgcgagtgtgca
gaaggtttcacgggtaccctgtgtgcggagaacattgacgactgtaacccaaagccatgt
cactatggggtgtgtaaggacggcattggtatgcacacgtgcgagtgttacccgggttac
atgggtcagatctgcagcgagcagattaatgagtgcttaagcaacccatgccagaatgga
gggcgctgcatcgatcgggtcaacaagtacctgtgccactgcttacccggaacctctggt
gtgaactgtgagaacaacccagatgaatgcatcagtaacccctgtcagcatggagcttgt
gtggatggaattaacaagtacaagtgtgaatgcgagcctggatacacaggcgagcggtgc
agtgtggagatagacgagtgcagctcaaacccgtgtctcagcggagggacatgtgtaaat
aaagtaaatgggtttgagtgtcagtgtcctccggggactcacggcctgctgtgtcactcc
ggagcagatcactgtgccccacaaccctgccgtaatgggaagtgtgaggaggtgcagaat
gggtaccgttgtgtgtgtttccctggctacgagggtcagaactgcgaacaggagaagaac
gaatgcgagtcaaacccctgtcagcatggagcagcctgcctggatgctgtgaactcatac
acctgcaagtgtctgcttgggtatactggtgtgaattgtgagatcaacattaacgagtgt
cagtcaaacccctgtgagaacaagggcacctgcattgatggaattaacagctacacctgc
aattgccctctgtcttacacagggagccactgtgaggttgagttagtgccgtgtgcgtct
ctcccgtgtcagagaggaggtgtgtgtctaccatcgtcagattacacctcctacacctgc
aaatgccccagtggatggcaaggagcccagtgcacagaagacatcgacgaatgcaagaag
aacccatgtctgaatggtgctcactgtctgaacaatcagggtagctacatgtgcagctgc
cagcccggttacagcggcgtgaactgccagactaacattgacgactgcagctccaacccc
tgtatcaacggaggctcatgcgtagacaaggtgggccggttttcgtgcgagtgcaggccg
gggttctctggtgagcgatgcgaggaggaggtgaacgaatgcgaaagctccccctgcagg
catggaggaacttgcacggactttgtcaacagctacacatgccagtgtcggcccggcttc
agcggcatcaactgtgagcgcaacatccccgagtgcactgagacctcttgtctgaataat
ggcacgtgtgtggacggcataaaccagttcacctgtcgatgtcgtcccggtttcactggc
tcgttctgccagtacgagattaacgagtgtgaatcgcagccatgcagaaatggaggcacc
tgcaacgacggcctgggaactttccactgctcctgtcctatggagtacaccggtcgattc
tgccagtcactggcagatctctgtagaaacatccagtgcaagaacggtggcgagtgtgtg
cagcaggagacaaagtggagttgtcggtgtcctcaggactggagtggcctctactgtgac
atcccaaacatctcgtgccgtaacgccgccttgaagaaaggtgtagcagttgagcatctg
tgtcaaaacgggggcaagtgtgaaaacaaggataatacacactactgcttgtgtcaaatg
ggctggactggcagctactgtgagacagggattgatgaatgtctttccagtccgtgcagg
aacggggggacgtgtatggactatcagggaggatatgactgcaagtgcaaacctgggtat
cagggtgtgaactgtgattatgatgtaaatgagtgccagtcgaacccgtgtcgtaatgga
ggcacctgcgtcaacttggtgaaccacttctactgctcctgcccaccaggaaccaaaggt
ccccagtgcgaggtggacatcgacgaatgctcgactgagtttggccctccctgtttgaat
ggcggtcgctgtttggatggtatcggtcaatacaagtgcgtgtgtcctcccggttttacc
ggcgagcgctgcgaaggagacattaacgaatgcaggccttatccttgccacaaacccggc
agcatcgactgcgttcagctagccaacgactttcagtgccgctgtcgccttggttacacc
ggtcgcctgtgtgaatcgatggtagacctctgtcagtcgaaaccctgccacaacggaggc
aggtgttctatgaacacaagctcagtccatggatacagctgctcgtgtccacctggctac
acggacttcaactgcggtgagatcgtgggccgcagttgtgccagtctccgctgtcagaat
ggtggacattgtcaggagtcccaatccagccgagtgcagtgcgtctgtccatctggcttc
tcaggcccattgtgcgaaaacgtaactccatcctgctcctgccaaaatgggggcgtgtgc
atgaaagaaatgagcaaaccttacaggtacttttgccactgtctggttggctacagtggt
gagcactgccagcacagagacccgtcctgtccttatgtggagtgtcaggggcgcagcagt
gacggggtgtgtgacccgcaatgtaagacgttggagtgcgaatgggacggaggagactgc
acactgaaacggctcaacccctgggaaaactgcacggccaacgtgccatgctgggagttc
ttccataataagcgctgtgaccccgagtgcaacgttgccggctgtctttttgacagcttc
gagtgccacagcaaccccacgtcgcccagcaagtgcaagtatgacgagtactgtcgtgac
cattaccagaacggccgctgtaatgagggctgtaacacagaggagtgcggctgggatggt
ttggactgctccagcgacaagccacctcagctggcggacggcacgctggtcatcgtggtg
ctgctgcagcccacagagctgctgggagatatgaaaggcttcctgcgctcactgggtatg
ctgcttcacaccaacctgcgtgtcaagcgcgacgacaaaaaggagctgatgatctatccg
tattacggtgccgaccacgaagactcgcatgccggcacccgcactgccaaacgactcggc
aagagggagctggggaatgagattattgggtcaaaggtgtatctggagattgataatcgt
cagtgcactcaaacatccactgagtgtttctccagcactgaccttgctgcctcatacatc
gctgctgaagccctcaaagctgagctgcaatatcctgtcttatctgtggagagtgaatca
ggctttatagttcaaccacctgccaatcctttgttttacctcgtcggcgtggcggtcgct
atcatgctgcttatcctgattttgggcgttttggttgccaaacgtaaacgcaagcacggt
ctcctttggctgccagacggcttcctagccaagaaggacagcaaacgaagagagcccgtt
ggccaggatgacttcggcatgaagagcctacagaagtcacagatggatggcagtgctggt
catcactggccagaggaggatcttctgcccaagaaaccaaggcaggaagacaaaccgttg
ttgggagtggatgcaggagtggatcgtcgcgagtggaccctgcagcattgtaaagctgcc
gatatcaccctcacgccacctcaggctgacatcgacattgactgtctggatgtcaacgtg
aaaggacctgatggtttcactcctctaatgctggcgtctctccgcggcggcagcagcccc
gagtgcgttagcgtcttagcagaagaggaggaggaaagcggagtggacgaacccggaacg
aacatcatcagcgatctgatttctcagggtgccacactcaactctcagaccgagcgcacg
ggcgagacggctcttcacctggccgctcggtacgcccgcgccgacgctgccaagaggctg
ctggacgctggagctgaccccaacgctcatgacaacatgggtcgcacgccgctgcacgcg
gccatcgccgccgacgctcagggagtgtttcagatcctgatacgtaatcgtgccacagaa
ctggactcgaggatgaacgatggaaccactcctttaattctggctgccagattggccgta
gagggtatggtggaggagctggtgcactgccacgcggatgtaaacgctgtggacgaccat
ggtaaatctgccttgcactgggccgctgctgtgaacaatgtagaagccacgctggtgctc
ctgaagaacagcgccaatcgagacatgcaggacaacaaggaggagacgccgttgttcctg
gcggcacgtgaaggcagtttcgaggcggcacaggtccttctggatcactattcgaaccgt
gacatcactgatcacctagatcggttgccacgtgacaccgctcaggaacgcatgcatcat
gacattgtccgcctgctcgaccagtacaatctggttcacagcccacattctggaccgaac
catgtaggaaacggtgggggcggacactccatggtctgcaacagtaatggggtcattaga
atgcgactgggacagcagaacaagaagaaccggcgtggtggtgccaccaaactcggaggc
cctaatggcaccggaggcggagtcaaagatctgaaggatatgaagacgaagcggaggaaa
aaaccagctggaggagaaacgacaggattggctgcatccagtggtaacgtagcaaccgtg
actgctaacactaatggcgccaagggagcagcgacggcgggcactggtgctctttcggaa
agctcagtgacaatgtcgccggtggattcgcttgaatcgccccattcctacacagcagat
cctgcaggagcaactaacatggctaaatcacctccgctgatgaacagcccctcaacccgc
ccgctcctgccccctgtcagccacatgctagggcagcagcagagctgggtgggtgtgcct
aagcacggctattccacccctcatgttttcagccacatgctttcccaccagatgacgccg
ggacactcaggcctgccccagccccatcacggctctgggattctcaggcctgtcaacgtc
tcggtgagtcgagagcagcttccatccattgtcaccttccagatgatgggctccnagaac
caggcacatcacaaacctaacccgcaggctggcatgcaggtgagccaagcccatacccag
ggtcttaaccacatgcactgcagcccggagatgatgtatcccatgcaggagacggggcca
cagcatggaatccttcgccttcatggtcacggccatgagtctcaggttaggcaggtgacg
ctgtaccaaccgcagctacagagccctgtggataaatacccaactcctccttctcaccgc
agctacgccagcggtgctgggtcagaggtggtgactacttcgggtcagggctctgaggtc
acaactccgggtcatggagctccaccctcgagtgagcacccgtacctgacgccatcgccc
gagtcaccagatccctggtcctcttcgtcttcgcctcactcgcattcagactggtctgac
gttaccacaagtccgcacggcgcactgcacacgcacgcgcaccctcacacacatgcacac
ctcacgttccagagcaggctcccctcctgcagccgcagccctcccagccagcgcagccgc
cacctcagcagcaagcctgcagcagtgtgtacgcgtaatagcacagaggaactgcttggc
gctgactgttgtgtttatatgcaatttaactgcataaatatgttgcctgtggaaaggcaa
aatctgtttcttctctcacacactgctctgtattttttattttttattttctatgcagat
agtggtttttatatgcaacttttctttctgctgatgcagagaacgaatctttctcgttgc
tcagtccaactttggatggattaa
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integrated database retrieval system
