Silurus meridionalis (southern catfish): 124399672
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Entry
124399672 CDS
T08004
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent R-type calcium channel subunit alpha-1E
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04010
MAPK signaling pathway
smeo04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124399672
04020 Calcium signaling pathway
124399672
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smeo04040
]
124399672
Ion channels [BR:
smeo04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
124399672
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
124399672
NCBI-ProteinID:
XP_046726730
LinkDB
All DBs
Position
17:complement(23688672..23773112)
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AA seq
2227 aa
AA seq
DB search
MGGQTGVSPTLFTRRRGGLIEQRDIIKAHQAHKIQSTPQARRKEWEMARFGDAVPPGHGV
LDGGSERSRTREPPSSSTGGVSPVFKQTKAQRARTMALYNPIPVRQNCFTQNRSLFIFSE
DNVVRKYAKRIIEWPPFEYMILATIIANCIVLALEQHLPGEDKTPMSKRLEKTEPYFIGM
FCFEAGIKIVALGFVFHKGSYLRNGWNVMDFIVVLSGILATAEAHMNIPVDLRTLRAVRV
LRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYSGRLHKTCIPD
PDIKENEIFPNWEVEFPCGERSCPLKYSCNGSWIGPNDGITQFDNILFAVLTVFQCITME
GWTTVLYNANDALGPTWNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKERERVENRRAFMK
LRRQQQIERELNGYRAWIDRAEEVMLAEENKNSGPSALDVLKRATTIKRRGVDTICHGPE
EQCVDIVSVGGPINRASIRSVKRGPTAYFKRKERMLRISVRRMVKTHTFYWTVLGLVALN
TICVAIVHHNQPEWLSNLLFFAEFLFLGLFLMEMFLKMYGLGPRLYFHSSFNCFDFGVIV
GSIFEVIWSFFRPGMSFGISVLRALRLLRIFKITKYWASLRNLVVSLMNSMKSIISLLFL
LFLFIVVFALLGMQLFGGRFIFEEFTPTNFDTFPAAIMTVFQILTGEDWNEVMYNGIRSQ
GGVKSGMWSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEEEEAAFNQKHALQ
KAKEVGPMSSFISSERRRRPYLYRKRVLIHRGRTAFSLEESDSFSDAPPLNSSRSFMSRR
ERRRRLTMSVWEQRTSQLRRHRQTSSREILYGSSMCHHRTQEHSSENPHSLEISSALDPL
ESLEPSMEEQNVSVALPDPPEPQNSPDTKDSYPNTTQTRISTTLELLDPLEAAKEEQNIE
NAQVPSEEFQDKNHLSVRRPNGERRQRGTRKNSKHGKPRNSETHHKRHDETNAGERSRST
SRERRTRNEEEEEEEKKSINDGGVSKEEKTTEDRDLAMNSEPATLQITDSTTLVSAVTCK
ATTEGENNNNQDKTSLSTNVVIEDTDTTVGLELSTITTKNKDLEASKSEKDDEEAANRSR
TPPDSMFXFKPHNPIRRACHYVVNLRYFEMCILLVIAASSIALAAEDPVATNSGWNKVLR
YFDYVFTGVFTFEMIIKMIEQGLILHDGSYFRDLWNILDFIVVVGALVAFALTNVLGNNK
GRDIKTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIA
VQLFKGKFFYCTDGSKDTEKDCQGYYIDYNKDKKEVKKREWKRHDFHYDNVIWALLTLFT
VSTGEGWPQVLQHSVDVTDEDQGPSRGNRMEMSIFYVIYFVVFPFFFVNIFVALIIITFQ
EQGDKMMEECSLEKNERACIDFAISAKPLTRYMPQNRHTFQYRLWHFVVSPSFEYTVLTM
ITLNTIVLMMKYYSAPPVYDAVLKHLNTAFTVLFSVECVLKILAFGFVNYFRDTWNIFDF
ITVLGSITEIVVDQQSASFNMSFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVC
LLIAMLFFIYAIIGMQVFGNIKLNGETHINQHNNFKTFFGALMLLFRSATGESWQEIMLS
CLGGQKCEADLSLIPHSEPEGGCGTDFAYFYFVSFIFFSSFLMLNLFVAVIMDNFEYLTR
DSSILGPHHLDEFVRMWGQYDRAACGRIHYKDMYKVVRTISPPLGFGKNCPYRVACKRLV
LMNMPVDAEMTVHFTSTLMSLIRTALEIKIARGGEDRGQMDIELQKEISVIWPHLSQKTL
DLLVPIHKASDMTIGKIYAAMMIMDYYKQSKAKKLRQQLEEQKHAPMFQRMDASSLPQEI
LCSAKALPFLTHSAGNALTRGGFVALSPISPQELFMQPITPQPEEEEFTPHYRPQHSPST
GENSENKLMKRSFSTIGDQCVNGVWQEEFSLERVSPERLERPRQRSFRGVRSNLREPVCK
ERGRSKERKHLLSPDPSRCNSEERTQSRTHDTLQTHTRSPSEGRIHTQGDASESPLPSSS
SDSRGRRQLPPTPSRPRPHISYSPLVCRSHLTPEEGQSRTHSAIEGAGSVLSPASPQRYT
SEPYLPLHDDSNSPEEMLTFEAAIATSRGRGHVVSSAPQLRHSWQMPNGHFRKGCELLSD
TDEDDRC
NT seq
6684 nt
NT seq
+upstream
nt +downstream
nt
atgggggggcaaacaggggtcagccccactctgttcactcgcaggagaggaggccttatc
gagcagagggacatcattaaagctcatcaggctcacaagatacagagcacaccacaggca
cgacgcaaagaatgggaaatggctcgtttcggagatgcggtaccgccgggccacggggtg
ctggatggcggatcggagcgcagccggacccgcgagcccccttcatcctccaccggtgga
gtgtctccggtgttcaagcagaccaaagcgcagcgcgcgcgcaccatggccctgtacaac
cccatcccggtccgacagaactgcttcacccagaaccggtccctcttcatcttcagcgag
gacaacgtggtgcgcaagtacgccaaaaggatcatagagtggccgccgttcgagtacatg
atcttagccaccatcatcgctaactgcattgttttggctctggagcagcatttacctgga
gaggacaagacaccaatgtcaaagcgactggagaagaccgagccgtacttcatcgggatg
ttctgtttcgaggcggggataaagatcgtggctctgggatttgttttccataaagggtca
tacctgagaaacggctggaacgtcatggacttcatcgtggttctcagtggaatcctggcc
acagcagaagctcatatgaacatcccggttgatttgaggacgttacgagcggttcgggtt
ctgcggcccctcaaactggtgtcaggaatcccaagtcttcagatcgtcttgaagtccatt
atgaaggctatggttcctctgctgcagattggcttgctgttattttttgctattttgatg
ttcgccatcatcggcctcgagttctacagcggccgccttcacaagacttgcatccctgat
ccagatataaaggagaatgagatatttccgaattgggaagtggagtttccgtgtggagaa
cgctcgtgtcctttaaaatacagctgtaacggatcatggatcggaccgaatgacggaatc
acgcagtttgacaacatcctgttcgctgttctcaccgtgttccagtgtatcaccatggag
ggctggaccactgtcctgtacaatgctaatgatgcattaggacccacatggaactggcta
tacttcatccctctcataatcatcggctccttctttgtgctcaacctggtgctaggagtt
ctgtccggagagtttgctaaggagagagagcgtgtggagaaccgaagagcttttatgaag
ctcagacgtcagcagcagatcgagagagaactaaatggatatcgagcttggattgatcga
gcagaggaagtgatgctggcagaggagaataagaactctggtccttcagctctggatgtg
ttaaagagagccaccaccattaagagaaggggagtggacaccatctgtcatggtcctgaa
gaacagtgtgtggatattgtgtctgttggtggaccgataaacagggcgagtatccggagt
gtgaagcgagggcccacagcctatttcaagaggaaagagaggatgttgcgtatctcagtc
cgccgtatggtcaagacacacactttctactggaccgtgctgggcctcgtggctttaaac
accatctgtgtggccatcgttcatcacaaccagcccgagtggctctccaacttactcttc
tttgcagagtttctgttcctgggtctgttcctgatggagatgttcctgaagatgtacggt
ctcggccctcgactttacttccactcctccttcaactgcttcgactttggagttattgtt
ggcagtatctttgaggtgatctggagtttcttcagacctgggatgagttttgggatcagc
gtgttgcgtgcgctccgactgctgagaatcttcaaaattaccaagtactgggcatccctg
aggaacctggtggtgtcattgatgaactcaatgaagtccattatcagtttattgttcctc
ctcttcctcttcatcgtagtgtttgctctgctgggtatgcagttgttcggggggaggttc
atctttgaagaattcactcctactaactttgatacttttccagctgccatcatgaccgtg
tttcagatacttacaggagaggactggaatgaagtgatgtacaatgggattcgctctcag
ggtggagtaaagtcgggaatgtggtcttctatttacttcattgtcctcactttgtttgga
aactacacgctactgaacgtcttcttggctatcgctgtagacaatctggccaatgctcaa
gagctcaccaaggatgaagaggaggaagaggcagcgtttaatcagaaacatgctctgcag
aaagcgaaagaggtcggccccatgtcctccttcatctcctcagagaggagaagacggccg
tatctgtacaggaagcgcgtgctgatccaccgcggccgcacggctttctctctggaggag
tcggacagtttcagtgacgctcctccactcaattcctctcgctctttcatgtccaggaga
gaaagacgcaggcgtctgaccatgtccgtgtgggagcaaaggaccagccagctccgccgc
catcgccaaacgtctagccgggaaatcctctacggctcgtcgatgtgccaccaccggaca
caagaacactcctccgagaaccctcactcactggagatcagttccgctcttgaccctttg
gagtctctcgagccatccatggaggagcagaacgtctctgtcgcgctgccggatcctccg
gaaccgcaaaactcaccagacaccaaagattcctacccaaataccacacagacccggatc
agcactactctggagcttctggatcctctggaagcggcgaaggaagagcagaacattgaa
aatgcccaggtaccctccgaggaatttcaggataaaaaccacttgagcgtccggaggccg
aacggggagcggcgacaacgagggacgcgtaaaaacagcaaacatggcaaacccaggaac
tcggaaacacaccataaacgacacgatgagacgaacgcaggcgaacgcagccgctcaact
agccgggaacggaggacgagaaatgaagaagaggaagaggaggagaagaaaagcatcaac
gatggaggtgtcagtaaagaggaaaagaccactgaggatcgagatctggccatgaactcc
gagccggccacactccaaatcacagacagcacaacactggtgtctgcagtcacttgcaag
gccactactgagggagaaaacaacaacaaccaagacaaaacatctctcagcacaaatgtg
gtgattgaagacacggacaccacagtgggattggagctctccactattacaacaaaaaat
aaagatctggaggcatcaaaatcggagaaggacgacgaggaagcagcaaatcgttcaaga
actcccccagacagcatgttcnattttaaaccacacaatccgattcgcagggcgtgccat
tatgtggtcaatctgcgttattttgaaatgtgtatcctgttggtcatcgctgcgagcagt
atcgctctggcggctgaagatccagtggctacaaactcaggatggaataaagtgttgcgc
tactttgattacgtgttcactggagtttttacatttgaaatgataattaagatgatcgag
cagggcctaatccttcatgatggctcttattttcgtgatctgtggaacattctggatttt
attgtggttgtaggagcactggtggcatttgctctgacgaatgtactggggaataataaa
ggaagagacattaaaaccatcaagtccctgcgagtgctgcgagtgcttcggccactgaag
accataaaaagacttcctaaactaaaggcggtgtttgattgcgtggtgacatctctgaag
aacgtctttaacatcctcatcgtctataaactcttcatgtttatcttcgccgtcatcgct
gtgcagctctttaagggaaagttcttctattgcactgacgggtccaaggacacggagaag
gactgtcagggttattacatcgactacaacaaagataagaaggaggtgaagaaacgtgag
tggaaaaggcacgattttcactacgataacgtgatctgggcgttactcacactcttcacc
gtctctacaggagaaggctggcctcaagttctacagcactcagtggacgtgacagatgag
gatcagggtccgagtcgggggaatcggatggagatgtccatcttctacgtcatttatttt
gtggtttttccgtttttctttgtcaacatctttgtggctctgatcatcatcaccttccag
gagcaaggagacaagatgatggaggagtgcagcctggagaagaacgagagggcatgtatc
gacttcgccatcagtgctaagccactaacgcgctacatgccacagaaccgccacacgttc
cagtatcgactgtggcacttcgtggtttcgccttcgtttgagtacacggtgctgaccatg
atcacactcaacaccatcgttctcatgatgaagtattattcagctcctcctgtatatgac
gctgtgctgaaacacctcaacactgcattcaccgtgctcttctctgtcgagtgtgttctc
aagatcttggcgtttggttttgtgaattatttcagagacacgtggaatatatttgatttc
attaccgtcttgggaagtatcacagaaattgtggttgaccaacagtctgcttcctttaac
atgagcttcctaaagttgtttcgagcagctcggctcataaagctgctcagacagggatac
accatccgcatcctcctctggacattcgtccagtccttcaaggctctaccatacgtgtgt
ttactcatcgccatgcttttcttcatctacgccataataggcatgcaggttttcggaaac
atcaagctgaacggagaaactcacatcaaccaacacaacaacttcaaaactttctttggt
gccttgatgttactctttaggagtgcgacaggcgagtcgtggcaagagattatgttgtcg
tgtttaggagggcagaaatgtgaagccgacctgtccctcatccctcactccgagcctgaa
ggaggatgcggcactgactttgcctacttctactttgtctcctttatcttcttcagctcc
tttctgatgttgaatctgtttgttgcagtgattatggataattttgagtatttgacacgt
gactcctcgattctcggtcctcatcacctggacgagtttgtgaggatgtggggacaatat
gacagagcggcctgcggcaggattcactataaggacatgtacaaagtagtgcgcactata
tcgccccctctgggcttcgggaagaattgcccctacagggtggcatgcaagaggctggtg
ctgatgaacatgccggtggacgctgagatgacggttcatttcacctccacactgatgtca
ctgatccgcaccgccctggaaatcaagattgcaagagggggagaagaccgtggacagatg
gacattgagcttcagaaggagatcagcgtgatttggccgcatctctctcagaagactctg
gacctgctggtgcccattcataaagcgagcgacatgacgatcgggaaaatctacgccgcc
atgatgatcatggattattacaaacagagcaaagcgaaaaaactcagacagcaactggag
gaacaaaaacacgccccgatgttccagcgtatggatgcctcgtcgttaccacaggaaatt
ttgtgcagcgctaaagctctgccgttcctcacacacagtgcaggaaacgctctgacgaga
ggtggtttcgtggcgttgagtcccatttctcctcaggaactcttcatgcagccaatcaca
ccacagccagaggaggaggagttcacaccccactacagacctcaacactcccccagcacg
ggagagaactcagagaacaagctgatgaagcgctcgttctccaccatcggtgatcagtgt
gtgaatggcgtgtggcaggaggagttctcgctggagagagtgagtcctgagcggctggag
agaccgcgacagcgcagcttccgaggtgtgaggtcgaacctcagagaaccggtgtgtaag
gagcgaggacgctcgaaggagagaaaacacttgctgtcacctgatccatcacgttgcaac
tccgaagagagaactcaatcaagaacacatgacacactacagacacacacacgctcaccc
agcgagggaagaatacacacacagggcgatgcttcagaaagtccacttccttcctcctct
tcagactccagggggcgtcgccagctgcctccgacgccctccaggccccgcccacacatc
tcctattcgcccttggtatgccgcagtcacctgacccccgaggaagggcaatcacggaca
cactctgccatagagggggcggggtcggtgttaagtcccgcctccccgcagcgctacacc
tcagagccatatctgcctctgcatgatgactccaacagtccagaggagatgctcactttt
gaggctgccatagcaaccagtcgagggcgtggccatgttgtaagctccgcccctcagttg
cgtcacagttggcagatgcctaatgggcatttccggaaaggctgcgagctcctcagtgac
acagacgaggatgaccgttgctaa
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