Silurus meridionalis (southern catfish): 124399722
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Entry
124399722 CDS
T08004
Symbol
ciao1
Name
(RefSeq) probable cytosolic iron-sulfur protein assembly protein ciao1
KO
K24730
cytosolic iron-sulfur protein assembly protein CIAO1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smeo03036
]
124399722 (ciao1)
03400 DNA repair and recombination proteins [BR:
smeo03400
]
124399722 (ciao1)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
124399722 (ciao1)
DNA repair and recombination proteins [BR:
smeo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
124399722 (ciao1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
WDR55
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
EIF3I
Beta-prop_WDR35_TULP_N
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_Vps41
Beta-prop_EML
WDR90_beta-prop_4th
eIF2A
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_ELP1_1st
WD40_RFWD3
Beta-prop_HPS5
MIOS_WD40
B-prop_COPA_B_2nd
Beta-prop_DCAF12
Beta-prop_NUP159_NUP214
Beta-prop_SPT8
RMC1_N
Motif
Other DBs
NCBI-GeneID:
124399722
NCBI-ProteinID:
XP_046726821
LinkDB
All DBs
Position
17:complement(13234687..13238890)
Genome browser
AA seq
331 aa
AA seq
DB search
MKDTLQLLHRLSAHPDSRCWYVAWSPSGALLASCGGDRAIRIWGKEGDTWQCKCVLSDGH
QRTVRKISWSPCGNYLASASFDATTCIWKRKDNDFQCLTVLEGHENEVKCVAWAPSGNLL
ATCSRDKSVWIWEVDEVDEYECVSVVNSHTQDVKHVVWHPTQELLASASYDNTICIYKEE
DDDWECRATLEGHTSTVWSLSFDPEGQRLASCSDDRTVKIWKECGAGDESADGSWKCVCT
LSGFHSRTIYDVAWCRLTGALATACGDDGVHVFKEEAASNPEQPVFYVSAHVPKAHSQDV
NCVAWNPKQAGLLATCSDDGEIAIWGYQSDA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacactttgcagcttttgcacagactgagcgctcacccggactcgcggtgctgg
tatgtggcgtggagtccttcaggcgcgctgctggcttcctgcgggggagaccgagctata
cggatatggggcaaagaaggagacacttggcagtgtaagtgtgtgctgtcagatggacac
cagagaactgtcaggaagatctcctggtctccttgtggaaattatcttgcatccgccagc
tttgatgccaccacgtgtatatggaaaagaaaggataacgactttcagtgccttaccgtg
ttagagggacacgaaaatgaggtgaagtgtgtcgcatgggccccgtctggtaatttacta
gccacctgcagcagggacaagagtgtttggatatgggaagtggatgaggtggatgagtat
gaatgtgtgagtgttgtaaattctcacacccaggatgtgaaacatgtagtttggcatccc
acacaagagcttcttgcttcagccagttatgacaacacaatatgtatttataaagaagag
gatgatgactgggaatgccgggcaaccttagagggacatacatcaacagtttggagtctt
tcttttgaccctgagggacagcgactggcctcctgtagtgatgaccgcacagtgaaaata
tggaaggagtgcggggcaggtgatgaatctgcagatgggtcatggaagtgtgtttgcacc
ttgtctggctttcacagccgtacaatatacgatgttgcatggtgtcgtctaactggcgca
ctggctacagcgtgcggagatgatggagtacatgtttttaaggaggaagcagcctctaat
ccagagcagcctgtgttttatgtatctgctcatgtccctaaagcccatagccaagatgtt
aactgtgtagcctggaatccaaaacaagcaggtttgctggctacatgcagtgacgatgga
gaaattgctatctggggctaccagtcagatgcttaa
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integrated database retrieval system
