Silurus meridionalis (southern catfish): 124399724
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Entry
124399724 CDS
T08004
Symbol
ufd1l
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1 isoform X1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124399724 (ufd1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smeo03009
]
124399724 (ufd1l)
Ribosome biogenesis [BR:
smeo03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
124399724 (ufd1l)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
CDC48_2
Motif
Other DBs
NCBI-GeneID:
124399724
NCBI-ProteinID:
XP_046726822
LinkDB
All DBs
Position
17:13229107..13234311
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AA seq
308 aa
AA seq
DB search
MFSFNMFDHPLPRAFHNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLN
ITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGFVQVESVNLMVA
TYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAV
SIIECDMNVDFDAPLGYKEPERPTQHHEEPADEETDPSNYEMDIGFRAFTGSGNRLDGKK
KGIEPSPFPMVPGDIKRGFPNYDFKLGKITFIRNSRPQPRKIEEDDPSTSFIAFSGEGQS
LRKKGRKP
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgttttcttttaacatgtttgatcacccactcccgagagctttccacaaccgcttctcc
actcagtaccgctgttactcagtgtcgatgctggccggccccaacgaccgatcagacgtc
gagaaaggcggaaaaattatcatgcccccatctgcactggatcagctaagcagacttaat
atcacataccctatgctgtttaaactgaccaataagaactcggacagaatgacacactgt
ggggttttggaatttgttgctgatgaggggatctgttacctgcctcactggatgatgcag
aacctgttattggaagaaggaggttttgtccaggttgaaagtgtcaatctcatggtagca
acatactctaaatttcagcctcagagcccagacttcttggacattacaaaccccaaagct
gtactggaaaatgctttgagaaactttgcctgcttgactactggtgatgtcattgccatc
aactataatgaaaagatctatgagctgcgtgtcatggaaaccaaaccggacaaagctgtc
tccattatcgaatgtgatatgaatgttgactttgatgctccacttgggtataaagagccg
gaaagacccacacagcaccacgaggaaccagcagatgaagagaccgaccccagtaattat
gagatggatattggattcagagcttttacaggctctgggaatcgccttgatggaaagaag
aaaggcattgagccaagtcctttcccgatggttccgggtgacatcaaaagaggatttcca
aactacgacttcaagcttgggaagatcactttcatcagaaactccagaccacagcctcgt
aaaattgaggaggatgacccttccactagcttcattgcgttctccggagaagggcagtcc
ttgcgcaagaagggcaggaaaccatga
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