Silurus meridionalis (southern catfish): 124399785
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Entry
124399785 CDS
T08004
Symbol
sin3b
Name
(RefSeq) paired amphipathic helix protein Sin3b isoform X1
KO
K23213
paired amphipathic helix protein Sin3b
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smeo03036
]
124399785 (sin3b)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
124399785 (sin3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
124399785
NCBI-ProteinID:
XP_046726919
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Position
17:23983443..23995669
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AA seq
1189 aa
AA seq
DB search
MAKIQAHSSTKHINQIQDKAFSAQKHQQHFQKLKVEDALSYLDQVKIRFANDPGIYNKFL
DIMKEFKSQSIDTPGVINRVSQLFHGHPDLVLGFNAFLPPGYRIEIPKNGMAFLQSPFSP
QQVSPGKAKSTESSSAQSEPVTSPQSTSPTPGVPPEPPGKIALPPPSQSQPATSSASPPA
SEASPVEFDSAISYVNKIKSRFLDHPEIYRSFLEILHTYQKEQLELKENRSRVSSGMTED
EVFSKVASLFKGQEDLLAEFGQFLPDAKRSLFTSGSLTGKEQVKKMDEEDFNKQGKKRPR
PLLMPHMTPLLKKKMKFSCSKDQSFASVGKHGVLREFTFFDKVRRLFKSQEVYENFLRCI
ALFNQEVVSGAELLQLVTPFLGKFPELYTQFKSFLGEKELSHSVSGLSERYMEGGGAREV
DYASCKRLGSSYRALPKTYQQPKCSGRTALCKEVLNDTWVSFPSWSEDSTFVSSKKTPYE
EQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRLSPEDQDRFRLDDCLGGTSEVIQR
RAVYRIYGDKAPEIIEGLKRNPATAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEKAYL
KSLDHQGVNFKQNDMKALRSKSLLNEIESIYDERQEQSTEEGGVGQQGREGGGACSEPHL
IFSYEDKQILEDAASLIIYHVKRQPTIHKEDKDQIKRIIHHFIPDLFFSRRGELSDTEEW
TDEEADTEDGGGTAAGTISETQTAAGMAERGGGGGVAAGAGPTGNQQQVNGESRRRRCAS
PRGVEQQEQLEQQKEQDGIYNLFFVNNNWYFFLRLHQTLCLRLLKVYRQAERQLLEHRAE
QSAERLLVAEGRRDKATDLAMELRLKQPSEVELEEYYPAFLDMVRSLLDGNLEGTQYEDT
LREMFTIHAYIGFTIDKLIQNIVRQLQHLVSDEVCVQVAELYVCERRRGAAGGNLSSQCV
RAAWETSYQWKSERVMAEENCFKVMFIQNKGEVTMTIELLDTEEAQADDPLEVQCLSNYM
EQFVGTDMSMCSQGEGYYFKPVFLPRNLRQFRRWQLRQVEALRSRRELRDQLGVESAGNL
DCRFKLNTHKMVFVMNSEDYMYRRGALIKARKTHLHVSRLQRERFSHWHGAWQSEHVSPA
AARSVHAWLLGDDLDDLLPCKTTCVTSQVKGQTVNRYQVRYSSKAPASP
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaattcaagctcacagcagcaccaagcacatcaaccagatccaggacaaagcg
ttcagcgcccagaaacaccagcagcacttccagaaactgaaggtagaagatgcgttatcg
tacttggaccaggttaaaatccggtttgcaaatgatcctgggatttacaacaagttcctg
gacattatgaaggagttcaaatctcagagtattgatacaccgggtgtaataaaccgggtc
tcccagttgtttcatggccacccggacctcgtgctgggcttcaatgcgttcctgcctcct
ggatatcggatagaaatcccaaaaaacggaatggccttcctgcagtcgcccttcagtccg
cagcaggtttctcctggcaaggcaaagagcacagagtcgagttcagctcagagtgaacca
gtaacgtcgcctcagagcacctcgccgacgcctggagttccgcctgaaccgccgggaaaa
attgccctgccaccgcccagccaatcgcagccagccacgtcgtctgcgtcccctcctgct
tcggaggcaagtcctgtcgaatttgacagtgccatcagctatgtgaacaagatcaagagc
cgattcctggaccatccagaaatctacagatcctttttggaaatcctgcacacttatcag
aaggaacagctggagctgaaggagaatcgaagcagggtgagttcggggatgacggaagat
gaggttttttccaaagtggcaagtctgtttaaaggacaggaggacctgctggcagagttc
ggacaattccttcctgacgccaagagatcgctgtttactagtggctctttaacaggcaaa
gagcaggtgaagaaaatggacgaggaggactttaataagcaaggcaagaaaaggccacgg
ccacttctaatgcctcacatgacgccgctgcttaagaagaaaatgaagttctcctgctcc
aaagatcagtctttcgcctcagtcgggaagcacggagttctcagagagttcactttcttc
gacaaggttcggcgtttatttaagagtcaggaggtgtacgagaacttcctgcgctgcatc
gccttgtttaaccaggaggtggtgtcaggagctgagctcctgcagcttgtcacaccgttc
cttgggaagtttccagaactttacacccaattcaaatcgtttctcggcgagaaggagctt
tcgcactctgtgtctggcctatcagagcgctatatggaagggggcggggccagggaggtg
gactacgcttcctgtaagagactcggttcaagttacagagctctgcctaaaacgtaccaa
caacccaaatgcagcgggagaacagcgctgtgtaaagaggtgctgaacgatacctgggta
tccttcccatcttggtcggaggactccacatttgtgagttcgaagaagacgccatacgag
gagcagctgcaccgctgtgaggatgagaggttcgagctggacgtggttctggagaccaac
ctggccaccatcagggttttggagagtgtgcagaagaagctgtctcgtctctcaccagag
gaccaggaccgcttccgattggacgattgtctgggcgggacctctgaggtgatccagagg
cgagctgtgtatcgtatttacggtgataaagctcccgagatcattgaaggtctgaagaga
aacccagcgactgctgtacctgtagttctaaagagattgaaagcgaaggaggaagagtgg
agagaagctcagcagggctttaataagatctggagggagcagtacgaaaaagcatacctt
aaatctctggaccaccagggggtcaacttcaaacagaacgacatgaaggcactgaggtcc
aaaagcctcctgaacgagatcgagagcatatacgacgagcgtcaagagcagagcactgag
gagggcggagttggtcagcagggtcgtgaaggaggcggcgcctgcagtgagcctcacctg
atcttctcctacgaggacaagcagatcctggaggacgcagcgtccctcatcatctatcac
gtaaagcgccagcccaccatccacaaggaggacaaagaccagattaagcgcatcatccac
catttcatccctgacctgttcttctctcggcgtggtgagctcagcgacacagaggagtgg
acggacgaggaggcagacacagaggacgggggtgggactgctgctggtacaatttcagag
acgcagacggcagcagggatggcagagcgaggaggagggggaggagttgcagcaggagca
gggcctacaggaaatcagcagcaggtgaacggtgagtcgaggcggcgacggtgtgcgtcc
ccgcgtggggtggagcaacaggagcagctagagcagcagaaagagcaggacggcatctac
aatctgttcttcgtcaacaacaattggtacttcttcctgcggcttcaccagactctgtgc
ttgcggctgctgaaggtgtacagacaggctgagagacagctgctggagcaccgtgctgag
cagagtgcagagcgcctcctggtggccgagggacgtagagacaaggccactgatctcgcc
atggagctgcgacttaagcaacccagtgaggtggagctggaagagtattacccagcgttt
ttagacatggtgcgcagtctgctggatggaaatctggaggggacacagtacgaggacacg
ctgcgagagatgttcaccattcacgcctacattggcttcaccatcgacaaactcattcag
aacatcgtcagacagctgcagcacctggtgagtgatgaggtgtgtgttcaagtagcagag
ctgtatgtatgtgagcggagacggggcgctgcagggggaaacctctcctctcagtgtgtg
agagctgcctgggaaaccagctaccagtggaaatctgagagagtgatggctgaagagaac
tgttttaaggtgatgtttattcagaataaaggtgaggtgactatgaccatcgagctgctg
gacacagaggaggctcaggctgatgatccacttgaagtacagtgcctgagcaactacatg
gaacagtttgttggaactgatatgtccatgtgttcacaaggggaaggttattatttcaag
cctgtatttttgcccagaaacctgcgtcagttccggcgctggcagctgcgacaggtggag
gctctgcgcagtcggcgtgagctgcgggatcagctgggtgtggaaagcgccggaaacctc
gactgtcggtttaaactcaacacacacaagatggtgttcgtcatgaactcggaggactac
atgtaccgccgtggtgcactgatcaaagccaggaagactcacttgcatgtgtctcggcta
caacgtgagcgtttctctcattggcatggcgcgtggcagagtgagcacgtctcccccgct
gccgcccgctctgtccacgcctggcttctcggagacgaccttgacgacttgctaccctgt
aagaccacttgtgtgacatcgcaggtcaaaggtcaaacggtcaataggtaccaggtgcgg
tacagcagcaaggccccagcttcaccgtga
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