Silurus meridionalis (southern catfish): 124399825
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Entry
124399825 CDS
T08004
Symbol
mib2
Name
(RefSeq) E3 ubiquitin-protein ligase MIB2 isoform X1
KO
K10645
E3 ubiquitin-protein ligase mind-bomb [EC:
2.3.2.27
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124399825 (mib2)
Enzymes [BR:
smeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124399825 (mib2)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124399825 (mib2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIB_HERC2
SH3_15
Ank_2
Ank
Ank_4
Ank_5
Ank_3
zf-C3HC4_3
ZZ
Ank_KRIT1
ANK_LRRK2
CUB_A2MG
Motif
Other DBs
NCBI-GeneID:
124399825
NCBI-ProteinID:
XP_046727009
LinkDB
All DBs
Position
17:complement(7741575..7804599)
Genome browser
AA seq
1015 aa
AA seq
DB search
MLSTVTPDLSPESPLLGTLPLPPARSRTSGPSSGANTTHPPAEPPAWPHRKRSGEAGSCS
ASPPARGAMEVGMRVVRGVDWKWGNQDDGEGHVGTVVEVGRQGSTSTPDKTVVVQWDSGT
RTNYRTGYQGAYDLLLYDNAQIGVRHSNIICDSCKKHGIMGMRWKCKVCFDYDLCTHCYM
NNKHDLSHAFERYETAHSQPVSLAPRQNLSRIILKGIFQGVKVVRGPDWDWGNQDGGEGK
IGKVVDIRGWDQESGRSVASVTWSNGTTNVYRMGHKGKVDLKYVSDGQGGYYYKEHLPKL
GEHAELQRQESADGHTFQQGDKVKCLLDVDILRQMQEGHGGWNPKMAEYICRIGTVHRIT
DRGDVRVQYSNNIRWTFHPGALTKVNTFAVGELVRVLDDIETVKRLQAGHGEWTDSMAPA
LGQVGKVLKVYADGDLRVAFGGQTWTFNPACLSAQPGEVDANLMTADNPSESRTTVISVL
EKLLSQSTEQDNPGRLVIEAAHGSVAKVRELVQKHPDKVDIKNQGKTALQVAAHQGHMEV
VKVLLQANSSIEAKDEDGDAALHYTAFGNQAEITRLLLSKGANVNLLNNSMCTALHISVN
KGFTDVVRVLTEHSADVNLQDSYGDTPLHDAIAKDFRSIIEILTVVRNIDFTQQNNRGFN
LLHHAALKGNKLATEMILARARQLADVKKEDGFSALHLAALNNHYEVADILIKEGRCDVN
IRNNRGQTPLQLAVTQGHMHLVELLVIEGANVNAEDEEGDTAMHTALSRQQLATSLSSTE
RDASNLYSRLSGSGLLGNTELNVGAAMACFLAQEGADMNYANHKGKSPLDLVADSIVLQL
IRSFSEKYRLQAGTCGTGGNGSSSSSLRRVHTTPNTMTNLVMPSAPGPSECLICSELALL
VLFSPCQHSVACEECAHRMKKCIKCQVTITKKIRQDQTEVDSSPNSESSEQHNLLEQLQS
RYKQMEERITCPICIDNHIKLVFQCGHASCIECSIALKTCPICRQSIRERIQLFV
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgctgtccacagtcacccctgacctgtctccggagagccccttacttggcaccctcccg
ctgcctccagctcgctcacgtaccagcggccccagcagcggcgccaacaccacccatccg
cctgccgagccgcctgcgtggccacaccggaagcgcagcggcgaggccggaagctgcagc
gctagcccacctgcccgcggcgccatggaggtgggtatgcgcgtggtgcgcggagtcgac
tggaagtggggcaaccaggacgacggcgagggccatgtaggcacagtagtggaagtgggg
cgccagggcagcaccagcacacctgacaagacagtcgttgtgcagtgggacagcggcact
cgcactaactatcgcaccggctaccagggggcctatgacctgctgctttatgacaacgca
cagatcggtgtccgccactcgaacatcatttgcgacagctgtaagaagcacggcattatg
ggaatgcgttggaaatgcaaggtgtgcttcgactatgacctgtgcacacattgctacatg
aacaacaagcacgacctctcgcacgccttcgagcgatacgagaccgcgcactctcagcca
gtgagcttggcaccgaggcaaaacctgtcacggattatccttaagggaatcttccagggc
gtaaaagtcgttcgtggacccgactgggattggggcaaccaagacggaggagaggggaag
atcgggaaggtggtcgatatccgaggttgggaccaagagtccggccgcagcgtggccagc
gtcacctggtctaacggcacaactaatgtctacaggatgggtcacaagggcaaggtggac
ctcaaatacgtctcagacggccaaggaggctactactacaaggagcacctgcccaagcta
ggtgaacatgcagagctgcagaggcaggagagtgctgatggtcacacattccagcagggg
gataaagtcaaatgtctgctggatgtggacatcctcaggcagatgcaggaaggacacgga
ggctggaatcctaaaatggcagagtacatctgcagaatcggaacagtgcacaggataacg
gatcgaggggacgtcagagtccagtacagtaacaacatacgctggactttccacccaggc
gctctgactaaagtgaacacgtttgcagtaggtgagttggtgagggtactggatgacatc
gagactgtgaagaggctacaagccgggcatggagagtggactgacagtatggcacctgcc
ctgggccaggttggcaaggttttgaaagtgtatgcggatggtgacctgcgcgtggcattt
ggaggacaaacgtggacttttaaccctgcgtgtctctcggctcagccgggcgaggtggac
gccaatctgatgacggctgacaatccaagcgaatcaagaaccacggttatttctgtcctg
gaaaagctgttgtctcagtccacggagcaggataaccccgggcgcctggtcatcgaggct
gctcatggcagcgttgctaaagtccgtgaactagtgcagaaacatccagataaggtggac
ataaagaaccaggggaagacagcactccaggtggctgctcaccagggccatatggaagta
gtgaaggtcctactgcaggccaacagcagcatcgaggccaaggacgaagacggagacgca
gcgctgcactacacagcattcggaaaccaagcagaaatcacccgcctgctcctgagcaaa
ggggccaacgtcaacctactgaacaactcgatgtgtacggcgctccacatctctgtcaac
aagggcttcaccgacgtcgtgagggtactgaccgagcactcggccgatgtcaacctacag
gactcatacggggacacgcctctacacgatgccatcgctaaggacttcaggagtatcatc
gaaatcctgaccgtggtgcgtaacattgactttacgcagcagaacaaccgcggcttcaac
ctgcttcaccacgcagccctgaagggcaacaaacttgcgacagagatgatcctggcccgt
gcccggcagctcgccgacgtgaagaaggaagatggcttctcagctcttcacctggctgct
ctcaataaccactacgaggtggccgacatcctcatcaaagagggccgctgtgatgtcaac
atccgcaataaccgcggtcagacgcctctgcagctggcagtcactcagggccacatgcac
ctggtggagcttctggtgattgagggagcaaacgtgaatgccgaagatgaagagggagac
acggcaatgcacacggccctcagccgccagcaactcgccacctccctgagcagcacagag
agagatgcctcgaacctatacagccgactgagtggctcagggctgttgggaaacacggag
ctgaatgtcggggctgctatggcctgtttcctggctcaagagggtgctgatatgaactac
gccaaccataaaggcaagagtccactcgacttggtggcagacagcatcgtgttgcagttg
atcaggagcttctctgagaaataccgactgcaggctgggacgtgtgggacgggtggcaat
gggagcagtagcagcagtctgaggagggttcataccacacccaacactatgaccaaccta
gtcatgcctagtgcaccaggtcctagcgagtgcctcatctgctctgagctcgctcttctt
gtgctcttctccccgtgccagcacagcgtcgcctgcgaggaatgcgctcacagaatgaag
aaatgcatcaaatgccaggtcactatcacaaagaaaatccgacaagaccagacagaggta
gacagcagtccaaactcggagagctcggagcagcacaacctgctggagcagctgcagtcg
cgctacaagcagatggaggagcgcatcacttgccccatctgtatcgacaaccacatcaag
ctcgtgttccagtgcggccacgcctcctgtatagagtgcagcatcgccctcaagacctgc
cccatttgccgccagagcatccgcgaacgtatccagctctttgtctga
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