Silurus meridionalis (southern catfish): 124399846
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Entry
124399846 CDS
T08004
Symbol
adamts13
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 13
KO
K08627
a disintegrin and metalloproteinase with thrombospondin motifs 13 [EC:
3.4.24.87
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smeo01002
]
124399846 (adamts13)
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.87 ADAMTS13 endopeptidase
124399846 (adamts13)
Peptidases and inhibitors [BR:
smeo01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
124399846 (adamts13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
ADAMTS_CR_3
TSP_1
Reprolysin
ADAMTS_CR_2
Reprolysin_3
Reprolysin_5
Reprolysin_4
Adt-1
TSP1_spondin
Reprolysin_2
TSP1_CCN
Peptidase_M10
Motif
Other DBs
NCBI-GeneID:
124399846
NCBI-ProteinID:
XP_046727062
LinkDB
All DBs
Position
17:5164440..5183543
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AA seq
1543 aa
AA seq
DB search
MAALVSIFLASVLVDTALLASQVSLEKGFLQSLADEDIFHLFGNNSSTLVPEFDLVWVSC
FGDETGRRHCSFQAHGKDFNLRLRNEPPLFCPSNLELAINTTLSVIKRRENKCCEQLDVL
KPEDARSFLSVCDGKIQGLLLMQSGKLHIHPLLHNHSERLRHSVVKPQGVPHLLLLRPSQ
VRTRLQQGQSHRRLQRSFLGAEVNHLELLVVVGPDVHEVHKQDTERYILTNLNIASELLR
DVTLGANIRVHLIRMIILTEPEPDIQISNDITSSLRSVCEWGHKVNPSTETDPLHADLLL
YITRFDLVLPNGNKQVRGVTQLGGVCSSQWNCVITEDTGFDLGITVAHEIGHSFGINHDG
TSNTCSSSGCIMASDGGYNSVDLTWSQCSRTQLLNFFSAGKAECVKDVPVLGGSLQAWKP
GLYYGVDDQCRIAFGSTASACSFTSNDMATCRFLSCHIAPGDRSTCTRLLVPLLDGTECG
LNQWCLKGRCVSASKLSSTLLVHGSWSSWSGYTSCSRTCGGGITYRKRECNNPRPAFGGR
DCEGEGTEAELCNRQPCESNQHEFMAQQCSDTDHQPLLLSAYSTTAYSWIPAVGFISGDA
QCKLMCRSREQDFMVSRGAQFIDGTRCELDSPVTAGSFTACLNGKCQLFGCDGVLNSRKV
RDVCGVCGGKGNTCHLITGSYTGGDDKEYVTFLSLPANATQVHINNWNPVFTHMAVMVND
EYVVAGDGDIALNTTHPSPLEEKHLIYNLYLTADFLPHTEELVLSGPISDKIQIQVYRKY
GREYGDITSPNITYQFYMSDAEHVEKIIEGQWSTVVSSCSVTCGSGIQRVSQECVDINTQ
EQVDEELCSSVNPNPPTLQPCHLPDCPPSWVLGEFGPCSTPCGVGERVRSVACMQKQGME
TVILADSACSQVTKPAVNETCNTHLCFARWQVSEPGECSAVCGPGQAHRSVSCLRSHRGA
DLAVNESHCLHPKPSENVPCVVDVCPIGWETHRKDQQDQGSLSVMLRSKIIPVYVWSPVI
GHCTKTCGNGTQQVWFSCVDHQSRLDVPEFLCDRFSKPELYTKLCVQSPCPAMWRYIQGV
CSVSCGGGVARRLLYCSQQAAGGDRGIEVVLAESACLPASRPLQVVPCNTEPCPARWQVG
EQGTCSVSCGLGVALRRVLCIQFDGKLERELEDERCERGKKPPVTVPCFTQACSFHWGVQ
EWSECSVSCGYGIQSRKVSCLGPSSPLPITPILCVHLPKPITIQACYNANCSTVGPSIIP
TQEPEAWSKKSELNVLHEENRTTYAPTGETEKLAEVVPTVPTLRSTTTVSTHPPQSSLCG
QLFLQERGLIDLRNVSERRCFLSIGRPLDEVIQIKIESSSLNCRHKENLALYERKSLRQI
CEKMTGKTLTSRSNVLLVRQSRLTPGNGVLFSYQSKNNVKKSHHEDCNVQLFSPSGFIEN
PVRSSSSLSSSLQSCRVFIDAPPALRIQIRALSVFNTTSSDSTYVMIRDVDAVRTAVFKG
AQLFHWISTGSRAEVEFHGEYQQMKGTFQAEYSYIKPEEAKLI
NT seq
4632 nt
NT seq
+upstream
nt +downstream
nt
atggccgctttggtgtcgatctttctggcgtcggtcctggtggacacggctttattagcg
tctcaggtttctctggagaagggttttttacagtcactggccgatgaagatatttttcat
ctttttggaaataattcatcaacattagtgcctgaatttgaccttgtgtgggtaagttgc
ttcggggatgaaaccggtagaagacactgttcgtttcaagcccatggcaaagactttaac
ctgaggctgagaaacgagccgccgttgttctgtccttccaacctggagctcgccatcaat
actacgctcagcgttataaagaggagggagaataagtgttgtgagcaactcgacgtactg
aaaccagaagatgccagatcttttctctcagtgtgtgacggaaaaattcaaggccttctt
ctcatgcagtcaggaaagctacacatacatccactgctccacaaccattccgaacgtctg
agacactcggtggtcaaaccgcaaggtgtgccccacctgctcttgctccgcccatcacaa
gtaaggacacgccttcaacagggacagagtcaccgaaggctccagaggtcattcctaggg
gcagaggtcaaccatttagagctgctggtagtagtcggtcctgacgtccacgaggttcac
aagcaggacactgagagatacatcctcaccaacctgaacattgcatccgagctgttacga
gatgtcactctaggggcaaatataagagtccacctgatccgtatgatcattctgactgag
ccagagccagacatccagatctcaaatgatatcacttcatctctcaggagtgtgtgcgag
tggggtcataaagtcaacccttccactgagactgaccctctgcatgcagacttactcctt
tacatcaccaggtttgatttagttttgcccaatgggaataaacaggtgagaggtgtgact
caactgggaggagtctgttctagccagtggaattgtgtaattacagaagatacaggcttt
gaccttggcatcactgtggcacatgagattggacacagttttggaataaaccatgacggt
acaagcaacacgtgcagcagtagcgggtgtataatggcgtctgatggcggttataacagt
gtggatctcacctggtctcaatgcagcagaacgcagctcctcaactttttcagtgcaggc
aaggcagagtgtgtgaaggatgtaccagtgctgggaggatcactgcaggcgtggaaaccc
ggactgtattacggtgtggacgatcagtgtcgcatcgcgttcgggagcacagcctctgcc
tgctccttcactagcaatgacatggccacctgtcgatttctgtcctgccacatcgcccct
ggtgatcgcagcacctgcacccgacttcttgtgccactgctggacggcactgaatgtggg
ctcaatcagtggtgcttaaagggccgttgtgtatctgcatccaaactgagctccactctg
ctggttcatggctcctggtcgtcctggtctggatacacctcctgttcacgcacctgtgga
ggagggatcacataccgcaagagagagtgcaacaatcccagaccagcatttggagggaga
gactgtgagggagaggggacagaggctgaactttgcaatcgccagccatgtgaaagtaac
cagcacgagttcatggcccagcagtgctcagatacagaccatcaacccctcctgctttcc
gcttattcaaccacagcatactcatggatccctgcagttggttttatttcaggtgatgct
cagtgtaagctgatgtgtcgctctcgtgagcaggacttcatggtgagtcgtggggctcag
tttatcgatgggacaaggtgtgaactcgacagccccgtcactgctggctcctttactgcc
tgccttaacgggaagtgccagttgtttggctgtgacggtgtgttaaactccagaaaagta
agggatgtttgcggggtgtgtggtggaaaaggcaacacctgccatctcattactggctct
tacacaggtggagacgacaaagagtacgtcacattcctcagtcttcccgcgaatgccact
caggttcacattaataattggaatccagttttcactcatatggccgtgatggtgaacgat
gaatatgtcgtagccggagacggcgatatcgcattaaacaccacccatccatcacctctg
gaggagaaacatctaatctataatctctacctcactgccgactttctacctcacacagag
gagcttgttttgtctggaccaatctcggacaagatccaaatacaggtatatcggaaatat
ggaagagaatacggagacatcacaagcccaaacatcacctatcagttctacatgtctgat
gctgaacacgtggagaagataattgagggtcaatggtccactgttgtttcgtcttgttct
gtaacctgtggctcagggattcagagggttagtcaggagtgtgttgacataaacacccag
gagcaagtagatgaagaactctgcagctcagttaatccaaacccacccaccctacagcca
tgccacctacctgactgcccaccaagttgggtgctgggtgaatttggtccttgcagcacc
ccctgtggagttggagagcgggtgcgctctgtggcctgtatgcagaaacagggtatggaa
acagtgatattagcagattctgcatgctctcaggtgaccaaaccagcagtgaatgaaacc
tgcaacactcatctatgctttgccagatggcaagtctcagagcccggtgagtgttcagct
gtgtgtggcccaggccaggctcacagatcagtgtcctgccttcgctcccaccgtggggct
gacttagcagtaaatgaaagccattgtttacaccccaagccttctgaaaatgtcccatgt
gtggtggatgtgtgccctattggctgggaaacacacaggaaggatcagcaagaccaaggg
tcactttctgtaatgctccgctccaaaattattccagtatatgtgtggagccctgtgatt
ggccactgcactaaaacttgtggaaatggaactcagcaggtatggttttcctgtgtggac
catcaatcacgactagatgtccccgagttcctttgcgatcgctttagcaagcctgagctg
tacacaaagctgtgtgtccagtcaccctgccctgccatgtggcgctacatacagggagtg
tgcagtgtgtcttgtggaggtggtgtggcaagaaggttgttgtactgctctcagcaggct
gcagggggagacagaggcattgaagtagtgctagcggagtcagcctgtctccctgcctcc
agacctctacaagttgtaccttgtaacactgaaccctgtccagcaaggtggcaggtgggt
gaacagggtacgtgttcggtgtcctgtggcctgggtgtggcattaaggagggtcttgtgc
atccagtttgatggaaaattggagagagagcttgaggatgagcgttgtgaaagaggcaaa
aagcctcctgtcacagtcccctgctttacccaggcctgctccttccattggggtgtacag
gagtggagcgagtgttcagtctcttgtggttatgggatccagtctcggaaggtctcatgc
cttggaccatccagccctctaccaatcactcccatcctctgtgtccaccttcccaaacca
atcactatccaggcctgctacaatgccaactgctccaccgtgggcccaagcattattcct
acccaggaaccagaggcctggagcaagaagagtgaactgaatgtcttgcatgaggagaac
aggaccacatatgcacctactggagaaactgagaaattagcagaagttgtacctacagta
ccaacgctgaggagcaccacaacagtgtcgacacaccctccacagagcagtttgtgtggg
cagctttttcttcaggaaagaggactcattgatctacggaatgtcagtgagaggcgttgt
tttctctctatcggccgcccccttgatgaagtcatccaaatcaaaattgagtccagctct
cttaattgtagacacaaagagaatcttgccctttatgagagaaaatctctaaggcaaatc
tgtgaaaagatgactggaaagacactgacttcaaggtctaatgtcctgctggtgcgtcaa
agccgtctcacccccggaaacggagtgctgttttcctatcagagtaagaacaacgtaaag
aaaagccatcatgaagattgtaatgttcagctgttctctccatctggttttattgagaac
ccagttaggagttcatcatccttatcctccagcctgcagtcttgtcgggtgttcattgat
gctccgcctgcactaaggatacagatcagagcgctgtctgtattcaatacaacttcctca
gactccacatatgtgatgatccgagatgttgatgctgtcaggactgcagtgtttaaaggc
gcacagcttttccactggatttcgacgggaagcagggcggaagtggaattccatggagaa
taccagcaaatgaagggaacatttcaagcagagtattcgtacattaagcccgaggaggct
aaactgatttag
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