Silurus meridionalis (southern catfish): 124399860
Help
Entry
124399860 CDS
T08004
Symbol
prex1
Name
(RefSeq) phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein
KO
K12365
phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchanger 1 protein
Organism
smeo
Silurus meridionalis (southern catfish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
DEP
SOS1_NGEF_PH
PDZ
PDZ_6
PH_10
PH
AIPR
Motif
Other DBs
NCBI-GeneID:
124399860
NCBI-ProteinID:
XP_046727081
LinkDB
All DBs
Position
17:complement(17294190..17371451)
Genome browser
AA seq
1615 aa
AA seq
DB search
MEGERARENAEQPCKDSERQLRLRLCVLNELLNTERDYVRTLAFLQSAFLQRIRQMGENQ
QSLTPEQVKILFSNIEEILDVHKEFVSTLEASLQPEPQPHHALGHAFLQFRQRFSVYGEY
CSNHEKALRLLVELNKIPEIRTFLLHCMLLGGKKSTDVPLEGYLLSPIQRICKYPLLLKE
LLKRTPKKHADYPAVEEALQAMKEVCSNINETKRQMEKLEALEQLQSHIEGWEGTNLTDI
CTELLLHGNLLKISAGNIQERVFFLFDNLLVYCKRKSRVSGKKSTKRTKSINGPLYVFRG
RINTEVMEVENVEDGTADYHSNNYTVTNGWKIHNTAKNKWFVCMAKNAEDKQKWLDAILK
EREQRESLKLGMERDAYVMIAEKGEKLYHMMMTKSRHLIKDRRRKLTVVPKCFLGNEFVA
WLLESGEISKPEEGINLGQALLENGLIHHVSDKHQFKNEQVLYRFRYDDGTYKARSEMED
IVSKGVRLYCRLHSLFTPVIKDRDHHLKTFKSVLPASKLVDWLVAQGDCCTREDAVTFGV
GLCNNGFLHHVLEKSEFKDESQFFRFHADEETEGTGTKTKQLRNDFKLIENIVAKSLLIH
PEEEDYGFELEEKNKAIMVKSVSRGSHAEMAGLQAGRKIYSINEDLVFLRPFSEVEMMIN
QSFCIRRSLRLLVATKNKELVKIPDCQDGLSFKLRGSCPPYVHAVKKGSEAAAAGLQTGQ
CVLKVNGANMSQSSYEEVLEHFSSYRPEHDQKEQSCGQWAYRVYDDVEGQAFSSCLSENG
SDAEENGCANGTVRGLQHLSLSGDVPLVNMMVDNVHLEHGVVYEYVSSAGIKHHVLEKMV
EPKGCFNLTAKILEAFSKDDNHFVTSCSQLIAQSERVVSMPQYEFRNICDTKLESIRKRI
CSYKQFAAELQNKGSPMFKQASTKPHALGCMDFVPTNCHLNLMQVSCPKSSTSAGRAFSI
RFGRKNSFFGLDPDQANLNPMSHAVHCVTSMAAPSWSCVSLDNEEVDGLDGGIEACRMRT
RSEGGLSFLLKQEDTESQDNYICLYNRLDIAVREMKLYVGQIDVLLSSITGPIQPQSSEP
PSYDSVPSTSPGHEETIQSKRVCFKVNEDDQEDSGHDTMSYRDSYSECNSNRDSVLSYTS
VRSNSSYLGSDEMGSGDELPCDMQIPLDKQDKLHGCLEHLFNQVDSINSLLKGPVMSKAC
EETKHFHPDHTQPEFRNADDWTARCRYILHKNIQEDPWNLPSSIKTLVDSLHRFVEDGRN
QLLLALLKCTDTELQLRRDAIFCQALVGALCTLAEQLVWALNLRYNNNGEYEDDGKEVSH
KWLEQISAIGVLFNFQSTLSPHVREERTMLEDTKAALQDLDKVTVLFRPLENECLVANTP
VHYQVEGSRQAIRVTLYLDSCHFSELPTRLQNGGSLKLHSALFTRALERPEGVAAQDFVA
MEEFQQRINAVSLEKVKFYYRRLRAFYLEKSNLSSESNSTAMKIDHLLRPLNTLDDLCRL
MQTYMNVKPSAAGHPSGVSMLLVSSELCSRLGACHISMCATGMQRCTLAVSLEQAMNLAR
NHGLMPRCFMQTMDIMRKQGTRVEISAKNLKVMDQMPAFAPRLYKLCLPPSDGDL
NT seq
4848 nt
NT seq
+upstream
nt +downstream
nt
atggagggagagagagctcgggagaacgccgagcagccgtgtaaggactcggagcgccag
cttcgcctgcggctctgcgtgctcaacgagctgctgaacaccgagcgagactacgtgcgc
actctcgccttcttgcagtcggcctttctccaaagaatcagacagatgggagaaaatcag
cagtctctgacaccggaacaggttaagatcttattctccaacattgaagagatcttggat
gtacacaaggagtttgtctctacactggaggccagtctgcagcctgagccccagcctcat
cacgcactcggtcacgcctttctccagtttagacaacgtttctcggtgtatggagaatac
tgtagtaaccacgagaaagctctgaggctgctggtggagctcaataagatccctgaaatc
cgcaccttcttactgcactgcatgttgctaggagggaagaaaagcacagatgttcctctg
gagggatacctgctctcacctattcagagaatctgcaagtaccctctcctgcttaaggag
ctgttgaaaaggacacccaaaaagcatgcggattacccggctgtggaagaagctctgcag
gccatgaaagaagtgtgctccaacatcaacgagacgaagagacagatggaaaaactggag
gctctcgagcagcttcagtcccacatagagggctgggagggaacaaatctaactgatatc
tgtactgagctactcctccatggcaatctgctgaagatctccgcaggaaacattcaggaa
agggtcttcttcctgttcgataaccttttagtgtactgtaagaggaagtccagggtttcc
gggaagaagtccaccaagaggacaaagtctatcaatggcccactgtatgtcttccgtggc
cggatcaacactgaagtgatggaggtggaaaatgttgaagatggaaccgctgactatcat
agcaacaactacactgtgaccaacggctggaagatccacaacacagccaaaaacaagtgg
tttgtgtgcatggccaagaatgcagaagacaagcaaaaatggctggatgccattttaaag
gagcgtgaacagagagagagtctcaagctgggaatggagcgggacgcttatgttatgatc
gcagagaaaggagagaagctctaccacatgatgatgaccaagagccgccatcttatcaaa
gaccgccggaggaagctcaccgttgtgcccaagtgcttcttgggaaatgaatttgtcgcc
tggctgttggagagtggagagatcagtaaaccagaggaagggatcaatttgggccaagca
ctgctggagaacggtctcatccaccatgtttctgataaacaccagtttaagaatgagcag
gtactgtatcgcttccgttatgatgacggcacttacaaagccaggagcgagatggaggat
attgtatccaagggtgtgagactgtactgtcgtctccacagcctcttcacacctgtgatc
aaagacagagaccaccacctgaagacgtttaaatcagtattaccagccagtaaactggtg
gattggcttgttgcacagggagactgttgtacccgcgaggatgccgtcacttttggggtt
ggtctatgcaacaatggcttcctgcaccacgtcctggaaaagagcgaattcaaggatgag
tctcagttttttcgattccacgccgacgaggagacagaaggcaccggcactaagaccaag
cagcttcgcaatgactttaagctcattgagaacattgtggctaagtccttactgatccat
ccagaagaggaagactatggttttgagcttgaagagaagaacaaggccatcatggtgaag
agtgtaagcaggggctcccatgctgagatggcggggttgcaggcaggaaggaagatctac
tctattaacgaagacctggtgttcttgaggcccttttctgaggtggagatgatgatcaac
cagtctttctgtatacgccgctcactcaggctgctggttgccaccaaaaacaaagagctc
gtgaagattcctgactgtcaggatggcttgtcattcaaactgcgtggatcctgtcctcca
tatgtgcatgccgtgaagaaagggtcagaggccgcagcagcaggcctgcagactggccag
tgtgtgctcaaagtaaacggcgccaacatgagccagagcagctacgaggaggtgctggag
cacttcagcagctatcgacctgaacatgatcaaaaagagcagagttgcggtcagtgggcg
taccgtgtctatgatgatgtggagggacaggcttttagttcttgcctttctgagaatgga
tcagatgcagaagaaaatggctgtgctaatggaacagttcgaggtctgcaacatttgtcc
ttgtctggagatgtcccactggttaatatgatggtagataacgtacacctggaacatggt
gtcgtgtatgagtatgtgagctcagccggaattaaacaccatgtgcttgagaagatggtg
gagcccaaaggctgcttcaaccttacagcaaagatattagaagcgttttctaaagacgac
aaccattttgtgactagctgcagtcagctgatcgctcagagcgagcgcgtcgtgtcgatg
ccgcagtacgaattcagaaatatctgcgacaccaaactggagagcatccgcaaacgtatc
tgcagctacaaacaatttgcagccgagttgcagaataaaggttcacccatgtttaagcag
gctagcaccaaacctcatgccctgggctgcatggactttgtgcctaccaattgccacctg
aacttgatgcaggtttcatgccccaagagcagcacatcagctggccgtgccttcagcatc
cgcttcgggcgcaagaattctttttttggccttgacccagaccaagccaatcttaaccct
atgtcccacgcggtccactgtgtgacaagcatggccgccccatcctggagctgcgtgagc
ctagataacgaggaggtggacggattagatggaggcatcgaggcatgccggatgcgcaca
cggagtgaaggaggcctcagttttctcctgaagcaggaggacactgagagccaggacaac
tacatctgtctttataaccggctggacattgcggtcagagagatgaagctctacgtgggt
caaattgatgtgctcctgtcctccatcactggccccatccaacctcagagctctgagcct
ccttcatacgacagcgtgccgtcgacttctccagggcacgaggagaccattcagagcaaa
agagtgtgctttaaagtgaatgaggatgatcaggaagattctggacatgacaccatgagc
tacagagactcttacagtgaatgcaacagtaaccgagactctgttctgtcctacacgagt
gtacgaagcaacagctcttatctagggagtgatgaaatgggttcaggggacgaactgcca
tgcgacatgcagattcccctggacaaacaggacaaactgcatgggtgtctagaacatctg
tttaatcaagttgactctatcaatagcctcctgaaagggccggtcatgagcaaagcatgc
gaggaaaccaagcatttccaccctgaccacactcagccagaattccgcaacgcggacgac
tggacagcacgatgcagatacatcctacacaaaaacatccaggaggacccttggaacctg
cctagttctattaaaaccctggtggacagtctccatcgcttcgtagaggatggcaggaat
cagctcttgttggctcttctgaagtgcacagacacggagctgcagttgcgacgggatgca
attttctgccaggccctcgtgggtgcgctgtgcacactggctgaacaactggtctgggcg
ctcaaccttcgctacaacaacaacggggaatatgaagacgatggcaaggaggtcagccac
aaatggctggagcagatatcagcgattggagtgctcttcaacttccagtccactctctcg
ccgcacgtgagagaggagcgcactatgctggaagacacaaaagcagctctgcaggatttg
gataaagtcaccgtgcttttccgaccattggagaacgaatgccttgttgcgaacacgcca
gtgcattatcaggtggaaggcagtcggcaggcaatccgtgtcacgctttacctggacagc
tgtcatttcagcgagcttcccacgcgtctgcagaacggaggcagcctcaagctgcactca
gctcttttcaccagagcattggagaggcctgaaggagtggcagctcaggactttgtggca
atggaggagttccagcagcggatcaatgctgtgtcactcgaaaaagtcaagttttattac
cgaaggctcagggctttctatttagagaaatccaatttatcatctgaatcaaattccact
gctatgaaaatagatcatctgcttcgtcctctcaacaccctggatgacctgtgcaggctc
atgcagacttacatgaatgtgaagccgagtgcggcaggccacccatccggagtgagtatg
ctgctggtgtcctcagagctgtgcagccgcctgggggcttgtcacatcagcatgtgtgcc
actggcatgcaaaggtgcacccttgctgtctccttggagcaggccatgaacctggcaagg
aaccatggcctcatgccccgctgcttcatgcagactatggacattatgcgcaagcagggc
accagagtagaaatctctgctaaaaaccttaaagtgatggaccagatgcctgccttcgct
ccaagactctacaagctgtgtctccctccttccgatggtgacctctga
DBGET
integrated database retrieval system
