Silurus meridionalis (southern catfish): 124399873
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Entry
124399873 CDS
T08004
Symbol
grid2
Name
(RefSeq) glutamate receptor ionotropic, delta-2 isoform X1
KO
K05207
glutamate receptor delta-2 subunit
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124399873 (grid2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smeo04040
]
124399873 (grid2)
Ion channels [BR:
smeo04040
]
Ligand-gated channels
Glutamate (ionotropic)
124399873 (grid2)
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
DUF6724
Motif
Other DBs
NCBI-GeneID:
124399873
NCBI-ProteinID:
XP_046727117
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All DBs
Position
17:14728818..15193034
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AA seq
1010 aa
AA seq
DB search
MKVFTTVMLLLAFWGLECEPVLSDSIIHIGAIFDESAKKDDEVFRMAVADLNLNNEILET
EKITFSVEFVDGNNPFQAVQEACELMNRGILALVSSIGCMSAGSLQTLADAMHIPHLFIQ
RAPAGTPRSSCPPTSHGQPDDYTLFVRPPVYLNDVIFQVVMEYTWQKFIVFYDTDYDIRG
IQDFLDKSSQQGMDVSLQKVESNINMMITGMFRTMRMEELHRYRDTLRRAVLFMSPASAK
AFITEVVETNLVAFDCHWIIINEEISDMDVQELVVKSIGRLTLVRQTFPLSQNSSQQCVR
NNHRINNSLCNPKDPKAHTLEITNRYIYDTVLLLANTFHRKLEDRKWHSMASLSCIRKGS
KPWQGGRSMLETVKKSGVSGLTNFLEFNDNGTNPNIFFEILGTNYGEDRGRGVSRLATWD
PVHGLNGTLSDRKLENNMRGVVLRVVTVLEEPFVMVSENVLGKPKNYQGFAIDVLDALSN
YLGFKYEIYLAPDHKYGSQQADGSWNGLIGELVFKRADVGISALTITPERESVVDFTTRY
MDYSVGVLLKKAERTMDMFACLAPFDLSLWACIAGTVLLVGTLVYLLNWLNPPRLPMGSV
SSTTLYNSMWFVYGSFVQQGGEVPYTTLATRLMMGVWWLFALIVISSYTANLAAFLTISR
IENSIQSLQDLSKQTELPYGTVLDSAVYDQLRSKGMNPFERDPMYSQMWRMINQSGGADN
NVEDSKEGIRKVKYGRFAFVWDAAVLEYVAINDEDCSFYTVSNNAPDRGYGIAMQHGSPY
RDIFSQRILELQQNGDMDILKLKWWPRESPCDLYSAVGTKKSASALDIHSFAGVFFVLAA
GVVLSCLIATIETWWTRRKGSRVPSKEDDKEIDLEHLHRRVNSLCTEDESPHKQFSTSSM
DLTPLDMDSLPAARQALEQISDFRNTHITTTTFIPEQIQTLSRSLSAKAASGFAFGAMPD
QRTGAGPFRQRAPNGGFFRSPIKTMSSIPYQPTPTPSFSYGNDPDRGTSI
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtttttacgaccgtgatgctcctgcttgcattctggggtctggagtgcgagccc
gtgctttccgattccattattcacatcggggccatatttgatgagtctgccaaaaaggat
gatgaggtgttccgcatggctgtggctgacctcaacctcaacaacgagatccttgagaca
gagaagatcaccttctcagtggagtttgtggatgggaacaacccctttcaggcagttcaa
gaagcatgtgagctgatgaacagaggcatccttgctctggtgagctcaatcggatgcatg
tctgcaggctcgcttcagaccctggccgatgccatgcacatcccccatctgtttatacag
cgggcaccagcaggaacacctcgctccagctgccctccaacaagccatggacaacctgat
gactacacactttttgtccgtccccctgtctacctaaatgatgtcatcttccaagtggtg
atggagtacacctggcagaagtttatcgtcttttatgacactgattatgatatacgaggg
atccaagactttctggacaagtcgtcccagcagggaatggacgtgtcccttcagaaggtg
gagtcgaacatcaacatgatgatcaccgggatgttccgaaccatgaggatggaagagttg
caccgctacagggacacgcttcgccgagcggttctctttatgagtcctgcaagtgccaag
gcattcattacagaggtagtggaaaccaacttggttgctttcgattgccactggatcatt
ataaatgaggagatctcagatatggatgtgcaggaattggtggtgaagtctatagggcgt
ctgactctcgtcagacagaccttccctctttctcagaactccagccagcaatgtgtgcgg
aacaaccaccgcatcaacaactctctctgtaaccccaaagaccccaaagctcacacatta
gagatcaccaaccgctacatctacgacacagtattgctgctggccaacacattccacagg
aagttggaggaccgcaagtggcacagcatggcgagcctctcgtgcatccgcaaaggctcc
aagccatggcagggtggccgctccatgctggagactgtcaagaagagcggagtgagcggt
ctgacaaattttctggaattcaatgataatggcacgaaccccaacatcttttttgaaatc
ctggggacaaactatggagaggaccgtggccgtggagtcagcaggctggcaacatgggac
cctgtccatggactaaatggaaccttgtctgaccggaaactggagaacaacatgcgtgga
gtggtgctacgtgttgttacggtcctggaggaaccatttgtcatggtgtctgagaatgtg
ttgggaaagcccaaaaactatcagggattcgccatcgatgttttggatgctctgtctaat
tacctcggcttcaagtacgagatctatttggctcctgatcacaaatacggcagccaacaa
gctgatggaagctggaatggtctaattggagaactggtgttcaagagagcagacgtgggg
atctcagcacttaccatcacacctgagcgagagagcgtagtggacttcaccacgcgctac
atggactactcagtgggtgtgctgctgaagaaagctgagcgcacaatggacatgtttgcc
tgcctggcgccttttgacctgtcgctgtgggcgtgcattgctggcaccgtgctccttgtc
ggcacgctagtgtacctgctcaactggctcaacccaccacggctacccatgggctctgtg
tcctctaccacgctttataactccatgtggttcgtctatggctccttcgtgcagcagggt
ggagaagtaccatacaccactttggccacgaggttgatgatgggcgtttggtggctcttt
gctttgattgtcatttcttcctacacagctaatctggcagcctttctcacaatctcccgc
attgaaaactcaatccagtcactccaggacctctctaagcaaacagagctgccgtacggc
accgtgctggactctgccgtgtatgaccagctgcgcagcaaaggcatgaacccttttgaa
cgagatcccatgtactcacagatgtggaggatgatcaatcagtcaggaggagctgataat
aatgtggaggattcaaaggagggtattcgcaaggtgaagtacggccgctttgcatttgtg
tgggatgcagctgtactggagtatgtggccattaatgatgaggactgctccttctacact
gtgagcaacaatgcaccagacagaggctacggcattgccatgcagcatggcagcccttac
agagacatcttttctcagaggatcttggagctgcagcagaatggggacatggatatcctg
aaactgaagtggtggcccagagaaagcccatgtgacctgtactctgccgtgggcaccaag
aaaagtgccagtgccctggacatccacagttttgctggcgtgttctttgttcttgcagcc
ggtgtggtgctgtcctgccttattgccactatcgagacttggtggacacggaggaaggga
tccagagtaccctctaaggaggatgacaaggagatcgacctggagcacctccaccggcgc
gtgaatagcctgtgcacagaggacgagagcccgcacaagcagttttccacctcttcaatg
gatctgactccactggacatggactcactgccagcggcacgccaggccctggagcagatc
agtgatttccgtaacacacacataaccaccaccaccttcatccccgaacagatccagaca
ctgagtcgcagcctttctgccaaggcagcatccggctttgctttcggcgccatgcccgac
cagcggactggcgccgggcccttcaggcagcgcgcacccaatggagggttcttccgcagc
cccatcaagaccatgtctagcatcccataccagcccacaccaaccccaagcttcagctat
ggcaacgacccagaccggggcacctccatatga
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