Silurus meridionalis (southern catfish): 124399886
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Entry
124399886 CDS
T08004
Symbol
fgd1
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 1 isoform X1
KO
K05720
FYVE, RhoGEF and PH domain containing 1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
124399886 (fgd1)
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
PH_11
RHG20_PH
PH_2
PH_alsin
zf-RING_5
PH_16
Motif
Other DBs
NCBI-GeneID:
124399886
NCBI-ProteinID:
XP_046727145
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All DBs
Position
17:26510449..26575655
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AA seq
1014 aa
AA seq
DB search
MQLNRPRSALIGFSSPPPQPPPPQPPSDTHPSFSSQFKAMRFSYHLSPQPGSRRTGSSTS
SPRLLTKSLSLEPGPCPGAHEAPQRLCSDPGPLGLQHCNGTSENEPQNAPPLPPKTRPPL
PGPKPQGKKSFGDVLILKMPPKPPHLQQQSGRRPRPPDKPLPPPPSRPLPVDPRQSRTGL
PREEGSSSPTCVLSLIERFEREQIIMVPDITGGVMSMPRVPEPQPVTDSVLPCTSLDEPM
EPPVLKEQEKETQEPEMEKEDEVKEEEEDRVQEDIEDDDKDLGASCSEKRLSTESGYGAS
DKLLDAMEMRELSQSEIPPDRLSLPPQQTDTKLANRDSGIDSISSPSHSEELCFAGDDRE
VCMSLPRLSSSSSCGCVEGPAGEEVVAGVEEGTRDSEGDSDLEEGSGDESENAMAMQPQP
KAERQDSVELSVQQRVFNIANELLHTEKAYVSRLHLLDQVFCGRLMEEARSRGSFPCEVV
MGIFSNICSIYCFHQQFLLPALEKRMEEWDVNPRIGDILQKLAPFLKMYGEYVKNFDTAM
ELVNTWMERSSQFKAIVHDIQKEEMCGNLTLQHHMLEPVQRIPRYELLLKDYLHRLPEDA
EDFKDAQKSLELIATAAEHSNAAIRKMERMRKLLKVYELLGGEEDIVNPTNELIKEGHIL
KLSAKNGTSQDRYLILFNDRLLYCVPKLRLIGQKFGVRARIDVDGMELKETSSMNVPRTF
LVSGKQRSLELQARTEEEKKDWIQAIQTTIQRHEQSVETFRMLNCSVREDECTPPNSPNS
TELGKRAPTPIREKEVTLCMKCQEPFNSITKRRHHCKACGHVVCGKCSEFRARLLYDNNR
ANRVCIDCYTTLVGVPPSPASLTNSTHRRRSILEKQASVAAENSVLCSFLHHMEKGSGRG
WQKAWFVIPENEPLVLYIYGAPQDVKAQRSIPLIGFEVSLPESCDRLERRCAFKMSQSHL
TVYFSADGEELQRRWMEVLSRAGRGEELQLQEHGLISEVLEEEAEELSPLGEST
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgaaccggcccaggagcgcgctgattggcttcagctcgccaccgccgcagcct
ccaccgccgcagccgccgtccgacacgcacccgagcttctccagccagttcaaggccatg
cgcttttcctaccatctcagccctcagcccggatcccgcagaaccggctcgtccacatcc
agtcctcggctcttgacaaagagtctttctctagagccaggcccatgtccgggagcccac
gaggcccctcagcgtctctgttcggacccagggcccctgggactgcagcactgcaatggc
acaagcgaaaacgagccccaaaacgccccacctttgccccctaaaacacggccaccgtta
cccggtcccaaaccacaaggaaaaaaatcatttggggatgtgctgatattgaaaatgccc
ccgaaaccaccgcatctccaacaacagagcggccgccgtccccggcccccggacaaaccc
ctgcccccgcctccgtcccgccctctcccagtggaccctcgccaatcacggacaggcctc
ccgcgggaagagggaagctcctccccgacatgtgtcctgtctctcatagagagattcgaa
agggagcaaattatcatggtgcctgatatcacaggcggagtgatgtctatgcctcgggta
cccgaaccgcagcccgttacggactctgttctgccctgcacttctctcgacgagcctatg
gaacctcctgttctgaaggagcaggagaaggaaacacaggaaccggagatggaaaaagaa
gacgaagtcaaagaggaagaggaagacagagtacaggaggacatagaggacgatgataag
gatttgggagcctcgtgctcagaaaagcgcctctccactgagtccggctacggcgcctcc
gacaaactcctggacgcgatggagatgagagagctcagccaatcggaaatcccgccagat
cgcctgtctcttcctccgcagcaaacggacaccaaactggccaaccgggacagcggcatc
gacagcatcagctctccgtctcacagcgaggagctctgcttcgccggcgacgacagagag
gtgtgcatgtctcttcctcgtttgtcctcgtcttcctcgtgcggttgcgtcgaaggaccg
gccggagaagaagttgtcgctggcgtggaggagggaacgagagactcggagggagacagc
gatttggaagaaggaagtggggatgagagtgagaatgccatggccatgcagcctcaaccc
aaagctgagagacaggactctgttgagctctcggtgcagcagcgcgtgtttaacatcgcc
aacgagctcctgcacacagagaaagcgtacgtgtccaggctccacctcctggaccaggtg
ttctgcgggcgactgatggaggaggctcgatcgcgaggctcgttcccctgtgaggtggtg
atgggcatcttttccaacatctgctccatctactgcttccatcaacagttcctgctgcca
gcgctggagaagcgtatggaggagtgggacgtaaacccgcggattggggacatcctgcag
aaactggctcccttcctaaagatgtatggcgaatatgtgaagaacttcgacacagccatg
gagctggtgaacacctggatggagcgctcatcgcagttcaaagccatcgttcatgacatt
cagaaagaggagatgtgcggaaacctcacccttcagcatcacatgttagagcccgtacag
aggatccctcgctacgagctccttctgaaggactacctgcaccggctgcctgaggacgct
gaggactttaaagatgcgcagaaatcgttggagctgatcgccacagcagccgaacattcc
aatgcagccatcaggaaaatggaacgcatgaggaagctgttgaaggtgtacgagctgctc
ggcggagaagaggacatcgtgaacccgactaatgagctcattaaggagggacacatcctc
aaactttcagccaagaacggaacatcgcaggacagatacctcatactgttcaacgaccgc
ttgctgtactgtgtccctaaactcagactgatcggacagaaatttggagtgcgggcacgg
atcgatgtagatggcatggagctgaaagagacgagcagtatgaacgtgccacggacgttt
ctggtgtcgggaaaacagcgctctcttgaactacaggccagaactgaagaagaaaagaaa
gactggattcaggcgatccagaccaccatccaaaggcatgagcagagtgtggagacgttc
agaatgttgaactgttcggtgcgtgaggacgagtgtacacctccaaactctccgaatagt
accgagctgggaaagcgtgctcccactccgatccgggaaaaagaagtgacgctgtgtatg
aagtgccaggagccgtttaactccattaccaagagacgtcaccactgcaaagcctgcgga
cacgtggtgtgtggaaaatgctcggaattccgtgcccgcttgttgtacgataacaaccga
gcgaatcgtgtgtgtatagactgctatacgacgctagtgggagtcccgccctctccggcc
agcttgaccaatagcacgcacagaagacgctctattttagagaaacaggcctctgtggcg
gcggagaacagcgtcctctgcagcttcctgcaccacatggagaagggcagcgggcgcggc
tggcagaaagcctggtttgtcatccctgaaaacgaacctttggtgctttacatttacggg
gctcctcaggatgtgaaggcccaacgcagcatccctctcatcggcttcgaagtctccctc
cctgagtcatgtgaccgtctggagcggcgttgcgccttcaaaatgagccagagtcacctg
actgtttacttcagcgcagacggagaggagctccaacgccgctggatggaggtgctctcc
agagctgggagaggcgaggagctacaactacaagagcacggcctgatctcagaggttctg
gaagaagaagcggaggagctgagccctctaggagaaagcacatga
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