Silurus meridionalis (southern catfish): 124399930
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Entry
124399930 CDS
T08004
Symbol
rab11fip1a
Name
(RefSeq) rab11 family-interacting protein 1 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124399930 (rab11fip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124399930 (rab11fip1a)
Membrane trafficking [BR:
smeo04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
124399930 (rab11fip1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
124399930
NCBI-ProteinID:
XP_046727229
LinkDB
All DBs
Position
17:complement(4763098..4781329)
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AA seq
1199 aa
AA seq
DB search
MSLAEQSQQWYPTSVQVTVLQARNLRVKGKNGTNDAYAIIQVAKDKFSTAVAEKCVEPVW
KEEATFDLPLFHRGNADRCTLYIIVMHRALVGMDKLLGQAVINLLDAHEDKAWKKTNWYK
LFDKNGKADKERGEVLLDIQFMRNNMTASMFDLSMTDKPRSRFSKLKDKVRGKKKDGLSD
SASAIVPASVNQVLTDSEGEGEERTDSPKLKKSSKFKSLFGSKTNLHRGVSQSMSTLGTL
PEKNSSLSSSRSSGLNEESGEGKTKFKLLGHKRNSSTDSKISLGPFSLLNRSKQSTPDQS
NLCINGTHVYAEDQENKAISGSSLSLSGSGKGSIEDLRKYHERNASAGSTDSFKGLSIPT
YKPDSEREFQVQQRPQEDEDKKHKKTEGRLQELLDEQERRKQQEQDERRRKLEEDEGKMQ
KERERKRQEEEEQQRKRREEEARKAEEQKRQEESRVTERLSSLFGLGRKKEEPISPAAES
PKQTEVLASLNPFEEIPLGSDNLNPSIEEKPADPQGGTAFTPMPPSSGFPARTAKVSAVK
PRLTLSQKTETDNTDSPAPPVPSDTQNSVPASNFSPEESPSDPFESFDMFSNLHSSMAPP
KPQRTFSDSPRGSMENLSGVNSSTSLSEEKSRALQPPSYNWDSSRNVKHQSPDSEKSQRP
SIPLPDYEALFPKKRHGVMTDTRWEHIIAEVNQRKMTLQDEKEMSVDGPDEPVSNKASIL
KERNTSSSDPHHSDRQLVSSASKKGQAPKQPLVPPKPANLTASKRQLEPFSEQNRSHERL
DSLHGGKTPNLMSIPDPVLSQIPEPKKEKPAPIARSIKKPSDQSSDDTTVLPLAKPRQGA
LNKEPARQVQPEQTVLAFASPAGSQEERKSGSMIPKNSCENVSFEERKSIPVNKSGNIPN
EQALAKSASQKRETEFNPFPSDELIPKDPWALPQQTMDQDDLFTGGLKNPQKPEEERFSD
DFDNIFGSAPLKNDPFFVPKNFHESVSSKNDTDLKKSHNSRPSSEKVYSQKKKLAPPPPG
KPVIGQDIIDGPVLQEANDHYAASKAHLDPFASLSSASPELQSGSVSGGKSTLFARVFPS
EVQSGTSQSSGGGGVLTSRRPHPVKPMSPYEIQSPGTISTGKDFKIQTIREVAEKSKPVE
CGAYTQLTQEELITLVVKQQTELSKKDEKILELEDYIDNLLVRVIDEKPSILSALNSKA
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgtctttagccgagcagagccagcagtggtaccccaccagcgtccaggtgacggtgctt
caggcgcgtaacttgcgggtcaaaggcaagaacgggacgaatgacgcgtacgccatcatc
caggtggctaaggacaagttttccaccgcggtcgcggagaagtgcgtggagcccgtatgg
aaggaagaagccaccttcgacctgccgctcttccaccgaggcaacgccgaccgctgcacc
ctgtacatcatagtgatgcaccgcgccctggtgggcatggacaagctgctaggccaggcc
gtcatcaacctgctggacgcgcacgaggacaaggcctggaaaaagaccaattggtacaag
ctgttcgataagaacggtaaggcagacaaggagagaggcgaggttctactggacatccag
ttcatgaggaacaacatgacagccagcatgttcgatctgtccatgaccgacaagcccagg
tcccgtttttccaagctcaaagacaaggtccggggcaagaagaaggacgggctctctgac
tccgcttccgccattgttcctgcctctgttaatcaggtcctcacagacagcgagggggaa
ggagaggaaagaacagactctccaaaattgaagaagtcttctaaatttaagtctcttttt
ggatcaaagacaaatctccacagaggcgtgtcccaatccatgtctacccttggcacgctg
cctgagaagaacagctcgctgagcagcagccgatcctcgggcctcaatgaagaatctggt
gaaggcaaaaccaagtttaaattactgggccacaaaagaaacagtagcactgacagcaaa
atatctttaggccccttctccctgctgaatcgctccaaacagagcactcctgaccaaagc
aacctgtgtatcaacggcactcatgtgtacgctgaggatcaagagaacaaggcaatttcc
ggttcctccctcagcctgagtggctctggcaagggttccatagaagacctccggaaatac
cacgagcgaaatgcatctgcgggctccactgactcgtttaagggcctcagtattcctacc
tacaaacctgactcggagagggaattccaagtccaacaacgccctcaagaggacgaagat
aagaagcacaagaaaacagaaggacgcctgcaggagcttttggatgagcaggagagaagg
aagcagcaagagcaagacgaaaggcggcggaaactggaggaagacgaagggaagatgcaa
aaggaacgagagcggaagcggcaggaggaggaggagcagcaaaggaagaggcgtgaagaa
gaggcgaggaaagcagaggagcagaaacgccaagaggagtccagagtcaccgagagactc
agttctcttttcggcctagggcggaagaaagaggagccaatttctccagctgcagagagt
cccaaacaaacggaagtattagcctccttaaacccgtttgaagaaattccacttggctca
gacaacctaaatccttctatagaggagaaaccagcagacccacaggggggaactgccttc
actccgatgccaccctccagcggctttccagctcgtacagccaaggtttctgcggtcaag
ccgagattgaccctcagtcagaagactgaaaccgataatactgactcccctgccccccct
gttccctcagacacccagaactctgttcctgcttcaaatttttcccctgaagagtcacct
agtgatcctttcgaatctttcgatatgttttctaacctccactcttctatggcacctccg
aaaccccaaagaaccttttcagattcgcctagaggcagcatggagaacctttcaggagtt
aatagcagcactagcttgtctgaggaaaagagcagagccctgcagccacccagctataat
tgggattcatccagaaatgtaaaacaccagtcaccagactccgagaaaagtcaaaggcct
tctattcctcttcctgactatgaagcactttttcccaagaagagacatggtgtaatgacc
gacacccgttgggaacacatcattgctgaagtgaatcagagaaagatgactcttcaggat
gaaaaggaaatgtctgtagatggtcctgatgagcctgtttccaataaagcttcgatttta
aaggaaaggaatacatcaagctctgacccgcatcacagcgatcgtcagctcgtgtcctct
gcctccaagaaggggcaggcacctaaacagcctcttgttcctcccaagccagctaatttg
accgcatcaaaacggcagcttgagcctttttccgaacaaaaccgttcccatgaaagatta
gattctctgcatggtggaaagaccccaaatttaatgtccattcctgaccctgttcttagt
caaattccagagccaaaaaaagaaaaaccagcccccatagccaggagtataaaaaagcca
tccgatcaaagcagtgatgatactacagtattgcctttagccaagcctaggcaaggagct
ctaaataaagaacctgccaggcaagttcaaccagagcaaactgtgcttgcttttgcatct
ccagcaggttctcaagaagaaagaaaaagtggttcaatgattcctaagaattcctgtgag
aatgtgagctttgaggaaagaaagtctatacctgtaaataaatctggtaacataccaaat
gaacaagcattggcaaaaagtgcttctcagaaaagagagactgaattcaaccctttccca
agtgatgaactaatccctaaagatccctgggctttaccacaacagaccatggatcaagat
gaccttttcactggtggactgaaaaatccacaaaagcctgaagaggagcgcttttcagat
gactttgataacatatttggatctgctccattgaaaaatgatccattcttcgtacccaaa
aatttccacgaatccgtgtcctctaaaaatgacacggatttgaaaaaatcgcataactct
aggccttcatccgagaaggtgtattcacagaagaaaaaactagcacctccgcctcctggg
aagcctgtaataggacaagatattattgatggaccagtccttcaagaggctaatgatcat
tatgctgcatcaaaagcacatttggacccatttgcatccctgtcttcagctagtcccgaa
ctccagtctggaagtgtgtctgggggcaaaagcacactctttgccagggtatttccctct
gaggttcagtcaggcacttcacaaagcagtggaggtggtggggtattgacctctcgcaga
ccacatccagtgaaacctatgagtccttatgaaatccagtctcctggtacgatttccacc
ggaaaagatttcaaaattcaaaccattcgggaagtggctgaaaaatcaaagcctgtagag
tgtggcgcctacacccagctcactcaggaagagctgatcaccctggtggtgaagcagcaa
accgagctatccaaaaaggacgagaagatccttgagctggaagactacattgataatctg
ctggtgcgtgtcatcgatgagaaacccagcatcctttcggccttgaactccaaggcttag
DBGET
integrated database retrieval system
