Silurus meridionalis (southern catfish): 124399933
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Entry
124399933 CDS
T08004
Symbol
brf1a
Name
(RefSeq) BRF1 RNA polymerase III transcription initiation factor subunit a
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smeo03021
]
124399933 (brf1a)
Transcription machinery [BR:
smeo03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
124399933 (brf1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
zf-FPG_IleRS
A2L_zn_ribbon
Motif
Other DBs
NCBI-GeneID:
124399933
NCBI-ProteinID:
XP_046727244
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All DBs
Position
2:28171881..28214772
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AA seq
677 aa
AA seq
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MRRCKNCGGTDVDVDQARGDAVCMTCGSVLEDNIIVSEVMFVESSGGASSAVGQFVASDS
QGNVPSLGANFTGMGKESRAQTLQNAKRNINHLGHQLQMNQHCLDTAFNFYKMALCKRLT
RGRKAAHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYVLGRTFLVLARELCINAPAIDP
CLYIPRFSHMLEFGEKSHEVSMTALRLVQRMKRDWMHTGRRPSGLCGAALLVAARMHEFR
RTIKDVIGVVKVCEATLRKRLSEFEDTPTSELTIDEFMRVDLEQECDPPSFKDGQRKTRL
QKIEEELAKKIDDVQGEISGYQDEIEMELDISRPKSRGIFAAYAKNDDAVSVTSSSVHDL
NDEGEDEDLRVAASHLSKDLPGISDGKERRDDDGQEAREEERVSQSKRPSLEALLGPLPT
AASLGLSDSIHKCVGEEKENENDSVSDGGELDLSGIDDGELEWYILNEKEVKIKTELWML
ENADYLKEQKEKEERIAKEKELGIYKEKKPRKTTQRRAPINASTADEAIEKMLEQKRISS
KINYDVLKDLNHSSVKSPPPEPKESPGRSTQRRTPSSRPRRVNELTASLAKPASNFGKRL
RPLISAQPAKKPLLDQLVSDAPDAPAVVTHNAVVVESGPVAYEDLGEEEDEEEEEQCVSA
MALMGGDDYGYDFDDED
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgcggaggtgtaagaactgcggtgggacagatgtggacgtggaccaggctcgcggtgat
gccgtgtgtatgacctgcggctccgtgctcgaagacaacatcatcgtctccgaggtgatg
tttgtggagagcagcggaggagcctcgtcagcggtcggacagtttgtggcctcagactcc
cagggcaatgtcccgtctctgggtgcgaacttcactgggatgggaaaagagtccagagcg
cagacattacagaacgcaaagaggaatataaatcacctgggccaccagctgcagatgaac
cagcactgcctggacactgccttcaacttttacaagatggcgctgtgtaaacgcctgacc
cgcgggaggaaggcggcccacgtcatcgccgcctgcctttacctggtgtgcaggacggag
ggcacgcctcacatgctgctggatctcagcgatctgctgcaggtcaacgtgtatgttctg
ggaagaacgttcctggtgttggccagagaactctgcatcaatgctccagccatagatcca
tgtctgtacatcccccgcttttcccacatgttggagttcggcgagaagagccacgaggtg
tccatgacggcgctgagactcgtgcagaggatgaagagggactggatgcacacgggacga
aggccatcggggctttgcggagcagctctgctggttgccgcgcgtatgcacgagttccgt
cgcaccatcaaagacgtaatcggtgtggttaaagtgtgtgaggccacgctgaggaagagg
ttgagtgagtttgaggacacgcccactagcgagctgaccatcgacgagttcatgagggta
gatctggaacaggagtgtgacccgccctcgtttaaagatggacagaggaagacccggctg
cagaagattgaggaggagctggctaagaagattgacgacgttcagggtgaaatctcgggt
tatcaggatgagattgaaatggagctggacatcagtcgacccaaatccagagggattttt
gccgcttatgcaaaaaatgacgacgccgtctcagtgacgtcctccagcgtgcacgatctc
aacgacgagggtgaggatgaagatctgcgggtcgcggcatctcacctgagcaaagacctt
cctggcatcagtgacggaaaagagcggcgggacgatgacggacaggaagcgagagaggaa
gaaagagtctctcaatccaagcgcccgtctctggaagctctgcttgggccgctgccaacc
gccgccagcctcggcctgtccgactccatccataagtgcgtgggagaggagaaggagaat
gagaacgatagtgtgtcggacggtggtgagctggacctgagcgggatcgacgacggcgag
cttgagtggtacatcctcaatgagaaggaggtgaagattaaaactgagctctggatgctg
gagaacgcagactacctcaaagaacagaaagaaaaggaggagagaatagcaaaggagaaa
gagctgggtatctacaaagagaaaaagccgaggaaaacgactcagaggcgagcgccgatc
aacgccagcacagctgatgaggccattgaaaagatgctggagcagaaacggatttccagt
aagatcaactatgacgtcctgaaggacctgaaccactcgagcgtgaagagccctccacct
gaaccgaaggaatccccgggtcgctccacacagaggaggacaccgtcatcacgtcctcgc
agggtcaacgagctcacggccagtctggcaaagccggccagcaacttcggcaagaggtta
cggccactgatctcggctcagcctgctaagaagcctcttctggatcagctggtgtccgat
gcaccggacgcccctgctgtggttacccacaatgccgtggtggtggagagcgggcccgtg
gcatatgaagaccttggagaggaggaggacgaggaagaggaggagcagtgcgtcagtgcc
atggcgcttatgggaggagacgattacggctatgattttgacgacgaagattga
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