Silurus meridionalis (southern catfish): 124399935
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Entry
124399935 CDS
T08004
Symbol
trim33
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM33 isoform X1
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
smeo01001
]
124399935 (trim33)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124399935 (trim33)
Enzymes [BR:
smeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124399935 (trim33)
Protein kinases [BR:
smeo01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
124399935 (trim33)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124399935 (trim33)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
PHD-1st_NSD
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
124399935
NCBI-ProteinID:
XP_046727251
LinkDB
All DBs
Position
17:23533359..23559345
Genome browser
AA seq
1224 aa
AA seq
DB search
MADNKGQEDTESPASMELEPPATVNGDADGEHVDKANDTDSVVKDKDDGQSRETAPETPT
PNAETSEPAADADGGGGGGGGEGGGGGGGGGGGGEGGGGGGGEAEGGGEASTSRSSANVS
PDGNSNTESTEPSLSAVDATSTATPAAVACTSSPAPGTETAPGAAPASASAPSAVPINLL
DTCAVCKQSLQNRDCEPKLLPCLHSFCLKCIPQPERQISVGVAGPHGQDTHIVNVMRCTV
CYQDYKQIDMVDNYFVKDTTEASSTSTEKSTQVCTSCEDDASAIGFCVECGEWLCKTCIE
AHQRVKFTKDHTIRKKEEVSQESVSASGQRTVFCPIHKQEALKLFCETCDKLTCRDCQLL
EHKEHRYQFLEEAFENQKGIIETFMAKLHEKRNFVQFSTAQVQNRLKEASETHKKVEHEI
KIAVFTLINEINKKGKSLLQQLESVTKERTVKLLNQQRDIGSLAQQILHVLRFTHWAISN
GSSTALLYSKRLITYQLRFMLKARVDPVPHANGAVRFFCDPTFWAKNVVNLGNLVIEKMP
TPAPHPTNMMVGQQISPGHNTAGKHPGQINLAQLRLQHMQQAAFAQKQQHQHHQQQQQQQ
QQQQQQQQLQQQMRIASQMSQHPRQGGPPQMMQQQPPRLISMQSLQREGVNGGPHMYPPP
HHLRMASSQNRMPVVQPRLNGQPYPMMQTQLQRQHSNPGHAGPFPVASLHNISAANPTSP
TSASMASAHGHRGPTSPVVGPIELIPSVTNPENLPCLPDIPPIQLEDAGSTMLDNLLSRY
ISANTQPPTLASNNNLNSSPGPSTHSPGSSGLSSSLTPARPSSSSSTGSRGSRGSAGSSG
PGNTAPEQVKVKQEPGAEEECGFSGANVKSERGKDGRRSACMMSSPEASLTPPLPVLGSV
STGSVQDILRTLGENIKMEPRSETQPPSCSSTQKPSSKTGTHFTNGTQTTLLSSRSQRSS
MSSSQTNSQSNTEGKEDDPNEDWCAVCQNGGELLCCDRCPKVFHITCHIPTLRSSPSGDW
MCTFCRNLTNPEIEYNCDDDPPSKKDKSEQGLSPDDQRRCERLLLYLFCHELSVEFQEPV
PSTVPNYYKIIKHPMHLNLVKRKLQLKHPQHYQSPKEFVYDVRLVFSNCAKYNEMSRIIQ
VYDEEKQSNVQADSEVAEAGRTVSLYFEEKLAMIFPDQSFPVEPEKRSREEDAAEEAPED
ESDDELVQPKRKRLKPEEKPVHIK
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaacaaaggccaagaggatacagagagcccagctagcatggagctagagcct
ccggcgaccgtcaacggggacgccgacggcgaacatgtcgacaaggctaacgacacagac
tccgtcgtcaaggacaaggacgacggacagtcccgcgaaaccgctcccgagacgccgaca
cccaacgccgagaccagcgagcccgccgccgatgccgatggaggaggaggaggaggagga
ggagaaggtggtggtggcggcggcggcggtggtggtggtggtgaaggaggaggaggaggt
ggaggtgaggcagaaggaggaggggaagcgagcaccagccgcagtagcgctaacgttagc
ccggacggaaactcgaacacagaaagcacggaaccatctctgtccgcggtagacgccacg
tccaccgccactcccgccgcagtggcgtgcacgtcttcccccgctcccgggactgaaacg
gcgcctggcgctgcccctgcatctgcctcggctccgtccgcggtgcccataaacctgctg
gatacgtgcgccgtgtgtaaacaaagcctccagaaccgggactgcgagcccaaactcctg
ccatgtctgcactcgttctgcctaaagtgtatccctcagccggagagacagatcagcgtg
ggagtcgccggtcctcacggccaggacacgcacatcgtgaacgtcatgcggtgtacggtg
tgctaccaggactacaaacagatcgacatggtggacaattactttgtgaaggacacgaca
gaggcctctagcacttctacagaaaagtcgacgcaggtatgcaccagctgtgaagacgac
gccagcgccatcggtttctgcgtggagtgcggcgaatggctatgcaagacatgcatcgaa
gcacaccagagggtgaaattcaccaaggatcatacgatacgtaaaaaagaggaagtctct
caagagtcagtaagtgcatctggtcagcggacggtcttctgtccgattcacaaacaggag
gcgctcaagctcttctgtgagacctgcgacaagctgacctgcagagactgccagctgctg
gagcacaaggagcacaggtatcagttcttggaggaggcctttgaaaatcagaaaggaatt
atcgagacgtttatggccaaactgcacgagaagagaaattttgtacagttttctacagct
caggtgcaaaatagattaaaagaggcgtctgagacgcacaagaaggttgagcatgagatt
aagattgcagtcttcacgcttatcaacgaaatcaacaagaaaggcaaatctcttcttcag
cagctggagagtgtgacgaaagagcgcaccgtgaagttactaaaccagcagcgggacatc
ggctcactggcgcagcagatcctacacgttctacgcttcacacactgggccatcagcaac
ggaagcagcaccgcgctgctctacagcaagagactgattacataccagctgcgcttcatg
cttaaggctcgtgttgacccggtgcctcatgccaatggagctgtgcgcttcttctgtgac
cccaccttctgggccaagaacgtcgtaaaccttggaaacttggtgattgagaagatgcca
acacccgccccccaccccacgaacatgatggtggggcagcagatatcgccgggccataac
acggcaggaaaacaccccgggcagatcaacctggcacagctgcgactgcaacacatgcag
caggctgcttttgcacaaaaacagcaacatcagcatcatcagcagcagcagcaacaacaa
caacagcagcagcagcagcagcagttgcagcaacaaatgcgcattgcatcgcaaatgtcc
cagcatccacggcagggaggaccacctcagatgatgcagcagcagcctccaagactcatc
agtatgcagtcgctgcagcgggagggggttaacggcgggccccacatgtaccctcctccc
catcacctgcgcatggccagctcacagaatcgcatgcctgtagtccagccccgcctcaac
ggccagccgtatcccatgatgcaaacgcagctccagagacagcattccaaccccggccat
gccggccccttccctgtggcatccctgcacaacatcagtgctgccaaccccaccagcccc
accagtgccagtatggccagtgctcatggccaccgggggcccaccagtcctgtagtgggc
cccattgagctcattccttcagtaaccaaccctgagaacctgccctgccttcctgatata
ccccccattcagttggaagatgcaggttccaccatgttggacaatctcttaagtcgctac
atctctgctaacacacaacccccaactttggcatccaacaacaaccttaattcctcacca
ggtccctccacacactctccagggtcatcagggttatccagctcacttactcctgctcgg
ccttccagctcctccagcacaggaagtcgcggcagtcgagggtcagcaggcagttcaggg
cctgggaacacagctccggaacaggtgaaggtcaaacaggagcctggcgcggaggaggag
tgcggattctccggggccaacgtcaaatccgaacggggcaaagatggccgacggagcgcc
tgcatgatgagcagtcccgaagccagcttgactcctccgctccccgtactgggttctgtg
tccaccgggtcggttcaggacattttacggactttgggagagaacattaaaatggagcct
cggagcgagactcaaccgccgtcttgcagcagcacgcaaaagccgagctccaaaaccggc
acccattttaccaacggtacacagaccaccctgctttcctctcgctctcagaggagcagc
atgagcagctctcagaccaacagccagtcgaacacggaaggaaaagaggacgacccgaac
gaggactggtgtgcagtgtgtcagaatgggggggaactcctgtgctgtgaccgctgccct
aaagtcttccacatcacctgtcatattcccacactccgctcctcccccagtggagactgg
atgtgcacattttgcagaaatctgaccaaccctgagatcgagtataattgcgatgatgat
cctcctagtaagaaagacaagagtgagcagggtctgagccctgacgaccaaaggagatgt
gagcgtcttctgctttatttattctgtcatgagctgagcgtagagtttcaggaacccgtt
ccttccacggtgcccaactactataagatcataaagcaccccatgcacctgaacctggtg
aagagaaaactgcagctgaagcacccgcagcactaccagagccctaaagagtttgtctac
gacgtccgtctggtgttcagcaactgtgccaagtacaacgagatgtctcgaataatccag
gtatatgatgaggagaaacagagtaatgtacaggctgactcagaggtcgccgaggcaggg
aggaccgtgagtctgtacttcgaggaaaagttggctatgatcttccccgaccagagtttc
ccagtagaaccggagaagagatcccgggaggaggacgccgccgaggaagcgccagaggac
gaatcggacgacgaattggtgcagcccaagcggaaaaggttaaaacccgaagaaaagcct
gtgcacataaagtga
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integrated database retrieval system
