Silurus meridionalis (southern catfish): 124399946
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Entry
124399946 CDS
T08004
Symbol
tbc1d22b
Name
(RefSeq) TBC1 domain family member 22B isoform X1
KO
K20360
TBC1 domain family member 2
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124399946 (tbc1d22b)
Membrane trafficking [BR:
smeo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
124399946 (tbc1d22b)
Retrieval pathways
124399946 (tbc1d22b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
124399946
NCBI-ProteinID:
XP_046727278
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All DBs
Position
17:28231250..28278792
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AA seq
518 aa
AA seq
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MAADNKIHFWRRNTKGPGSLQPIYGARYPPVDPRVLCSLLKDTPKTNAVSVRSKKPATFH
EFARSTNDAWDIDDEEDGGFFTATHSTPVPAQSLPSGEAPRLKEASRLTDTEPEPRPGDR
AQPGSTEISQEHLNTDSELCNGRVVKSSSDVQLNSNTERSTLQKQQSLPLRPIIPLVARI
SDQNASGAPPMTVREKTRLDKFRLLLASSNTNLEDLRKHSWSGIPREVRPITWRLLSGYL
PANMERRELVLQRKREEYFGFIEQYYHSRTDEHHKDTYRQIHIDIPRTNPLIPLFQQPLV
QEVFERILFIWAIRHPASGYVQGINDLVTPFFVVFLSEFVEEDVENFEMAALPLETQRNI
EADSFWCMSKLLDGIQDNYTFAQPGIQKKVKALEELISRIDEDVHLHFQKFEVEYLQFAF
RWMNNLLMRELPLRCTIRVWDTYQAESEGFSHFHLYVCAAFLIKWRKEILSMMDFQGLLM
LLQNLPTIHWGNEEVGLLLAEAYRLKYMFADAPRHYKR
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgacaataaaatccatttctggaggaggaacacgaagggtccaggaagtctg
cagcccatctacggggcgcggtaccctcctgtggacccccgggtactctgttcgttgcta
aaagacactccaaagacaaacgccgtgagcgtcagatcgaagaagccggctacgttccat
gagtttgcacggagcaccaacgatgcctgggacatcgacgacgaggaggatggcggtttc
ttcactgcgacgcattccactcctgttccagcgcagtcactcccctcaggtgaagcacct
cgtctgaaagaggccagtcgtttgacagatacagaaccagagccccgcccaggggacaga
gcgcaaccaggaagcacagaaatctcccaggagcacctgaacactgacagcgagttgtgt
aatggcagagtggtgaagtccagcagtgacgtccagctgaacagcaatacagaacgcagc
actctacagaagcagcagtccctccccctgcgtcccatcatccccctggtcgcacgcatt
tcagaccagaatgcatctggagctccacccatgacggtgcgagagaaaacccgactggat
aagttcaggctgctgctggccagttccaacaccaacctggaggacttgcggaagcacagc
tggtcagggatcccgcgagaagttcgcccgatcacctggaggcttctctcaggctatctg
ccggctaacatggaacgtagggagctggttctccaaaggaagcgtgaggagtattttggc
ttcatcgagcagtattaccactccagaacagacgagcaccacaaagacacctaccgacag
attcatatcgatatacctcggacgaatccgctgattccgttattccagcagccgctggta
caggaggtatttgagagaattctgtttatctgggcgattcgacatccagccagcggctat
gtgcagggcatcaacgacctcgtcacgcccttcttcgtcgtcttcctctccgagtttgtg
gaggaggacgtggagaactttgagatggctgctctgcctttggaaacacaacgcaacatt
gaagcggacagcttctggtgtatgagtaaactgctggatggaattcaggataattacact
tttgctcagcctggtattcagaaaaaagtgaaggctctggaggagctcatcagccggatc
gacgaggatgtgcatctgcacttccagaagtttgaggtggagtacctgcagttcgccttc
cgctggatgaacaaccttttgatgagggagctgccgctgcgctgcacaatccgtgtgtgg
gacacgtaccaggccgagtcagagggcttctcacacttccatctgtacgtctgtgcagct
tttctcatcaagtggaggaaggagatcctctcaatgatggacttccaggggctcctgatg
cttctacagaacttacccacaatacactggggcaacgaggaggtggggttactcctggcc
gaagcctacagacttaaatacatgttcgccgacgctcctcgccactacaagagatga
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