Silurus meridionalis (southern catfish): 124400004
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Entry
124400004 CDS
T08004
Symbol
pex10
Name
(RefSeq) peroxisome biogenesis factor 10 isoform X1
KO
K13346
peroxin-10
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
124400004 (pex10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124400004 (pex10)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
124400004 (pex10)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-RING_2
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
RING_XB3-XBAT31
Prok-RING_4
zf-RING_5
zf-C3HC4_4
UL97
zf-ANAPC11
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
124400004
NCBI-ProteinID:
XP_046727405
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Position
17:complement(6528568..6533803)
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AA seq
327 aa
AA seq
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MALVPANQPQLIRSSQKDEYYQTSLRNNANDAFQSLAGSRRWLQWRKEVELLSDLAYYAL
TTLSGYQTLGEEYVSIIQVDPTKRRIPSRMRRLAFVLFHTFAPYVLDKLLVCIEHELEVD
EWNSPNTQQNSGLTWNPMLYVKAWVQRVLRRLNREQRKSLKPVVVAVQQGIAVLHRVHVA
LFYISGAFYHLAKRTSGISYLRVQGMPGDDKGIRTSYRLLGCVSLLQLAITLALQFNNLR
QKQRARHEWTQHRKLPVSPQQSSSSRSSSRLSRCILCLEERRHSTTTPCGHLFCWECITE
WCNTKTECPLCREKFQPHRLVFLRSYR
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttgttccagcgaaccagccgcagctgatccgctcctctcaaaaggacgaatat
tatcaaacgagtctaagaaataatgcgaatgacgctttccagtcgctcgctggatcaaga
cgatggttgcagtggaggaaagaagtggagctgctctcagatctcgcatattatgcccta
actacactctcaggatatcagacattaggtgaagagtatgtcagcattatccaggtggat
cccacaaaacgcaggattccttctcggatgcgcaggctggcttttgttctgtttcacacc
ttcgcaccatatgtcctggacaaactcctggtctgtattgaacatgagctggaggtggat
gagtggaattccccgaacacccagcaaaactctgggttaacctggaaccccatgttgtac
gtaaaggcatgggtccagagggtgctgaggaggctgaatagagagcagaggaaatcctta
aagcctgtggtggttgccgtgcagcagggaatcgctgtcttgcacagggtgcatgtggct
ctgttctacatcagtggtgctttttatcatctagccaaaagaacatcgggcatcagctat
ctcagagtgcaggggatgcctggggatgataaaggcattcggaccagctacaggcttcta
gggtgtgtgtccctgttgcaactggccatcacacttgctctgcagtttaacaacctgaga
cagaagcagcgtgccagacacgagtggacacagcacaggaagcttcccgtaagtccacag
cagtcgtcgtcctctcgatcgtcctctcggttgtctcgctgtatcctgtgcttagaggag
agacggcactccacaaccaccccatgtgggcatctgttctgctgggagtgcatcacagag
tggtgtaacaccaagacggagtgtccgctgtgtcgagagaaatttcagcctcatcgcctg
gtttttctgagaagttacagataa
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integrated database retrieval system
