Silurus meridionalis (southern catfish): 124400026
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Entry
124400026 CDS
T08004
Symbol
si:dkey-32e23.4
Name
(RefSeq) dynamin-1-like protein isoform X1
KO
K17065
dynamin 1-like protein [EC:
3.6.5.5
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04217
Necroptosis
smeo04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
124400026 (si:dkey-32e23.4)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
124400026 (si:dkey-32e23.4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124400026 (si:dkey-32e23.4)
03029 Mitochondrial biogenesis [BR:
smeo03029
]
124400026 (si:dkey-32e23.4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124400026 (si:dkey-32e23.4)
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.5 dynamin GTPase
124400026 (si:dkey-32e23.4)
Membrane trafficking [BR:
smeo04131
]
Endocytosis
Clathrin-mediated endocytosis
Dynamin
124400026 (si:dkey-32e23.4)
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
124400026 (si:dkey-32e23.4)
RhoA-dependent endocytosis
124400026 (si:dkey-32e23.4)
Mitochondrial biogenesis [BR:
smeo03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Fission and Fusion factors
124400026 (si:dkey-32e23.4)
Retention of mitochondria
124400026 (si:dkey-32e23.4)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124400026 (si:dkey-32e23.4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynamin_M
Dynamin_N
GED
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
124400026
NCBI-ProteinID:
XP_046727448
LinkDB
All DBs
Position
17:complement(3780182..3797569)
Genome browser
AA seq
671 aa
AA seq
DB search
METLIPVINRLQEVFLTIRAKIIQLPQIVVVGSQSSGKSSVLESLVGRDFLPRGSGIVTR
RPLVLQLVNVPPLEERRKQENESGTKANSQCSFPGIKAEEWGTFLHCKHQVFTDFTEIRK
EIEEETERTTNNKGISPEPIHLKIFSPNVLNLTLVDLPGITKVPVGDQPEDIETQVQEMI
LSFISNPNSLILCVSPANSDLATSDALKLAREVDPDGRRTLLVVSKLDLMDAGTDALEVL
LGRIIPVRLGIIGVVNRSQHDLNTQKSIADAWRDEQAFLQRHYPSLASRCGSRHLARSLS
RLLMHHIRDCLPELKARVTTLNAQFQARLSSYGQPVEDHSATLLQIVTKFATDYCNTIEG
TARHIQTSELCGGARICYIFHETFGRTLQSIDPLAGLTELDILTAIRNATGPRPALFVPE
VSFELLVKKQIKRLEEPSLRCVELVHEELQRIIQHCSSHSTQELLRFPKLHDSIVEVVTS
LLRKRLPITNEMVHNLVSIELAYINTKHPDFTDAAQVSASVNSQQTESLDGGNHWKNDKI
PVEDKSSVPGFGSPNKSVNLLDTAVPVSRKLSSREQRDCEVIQRLIKCYFLIVRKNIQDS
VPKAVMHFLVNFVKERLQSELVGQLYRQPLLQELLIESQETAQQRTEVAHMLEALQKANH
IISEIRETNLW
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggagactttaatccctgtcattaaccggctgcaggaggtcttcctcaccatcagagcc
aagatcattcagctccctcagatcgttgtggtgggctcacagagcagtgggaagagctca
gtcctggaaagtctggtcggacgagattttttaccccgtggttcaggaatagtcacacgg
cgccctctagtgttgcagctggtgaacgtcccgcctcttgaagaacgccggaaacaggag
aacgaaagcgggacaaaagcgaactctcagtgcagctttccaggaatcaaagctgaggaa
tggggaaccttccttcactgcaagcaccaggtttttacggatttcaccgaaattcggaag
gaaatcgaggaggagactgaacgcaccactaacaacaagggcatcagtccagaacccatc
catctgaagattttctcccctaacgttctaaacctcactttggtcgacctgcctggaatc
accaaggtgccagtaggtgaccagccagaagacattgagactcaggtacaggagatgatc
ctgtccttcatctccaatcctaattctctcattctgtgcgtatctccagctaactcggac
ctggccacttcagacgcattgaaactggcacgtgaggtcgatcctgatggtcggaggact
ctgctagttgtgagtaagctcgatctgatggatgcagggacggacgcactggaggttctg
cttggccgcatcatccccgtcaggctcggcatcatcggcgtggtcaacaggagccagcat
gacctaaacacccagaaaagcatcgcagacgcgtggcgtgacgagcaagcgttcctgcag
cgacactacccgtccttagcgtcacgctgcggctcacgtcacctggcacgctcgctgagc
cgcctgctcatgcaccacatccgtgactgcctgcccgagctcaaggctcgcgtgacgaca
ctgaacgcccagttccaggcgaggctgagcagctacgggcagcctgtggaggaccacagt
gccactcttctgcagatcgtcaccaaattcgccacggactactgcaacaccatcgagggc
acggcccgacacatccagacctcggagctatgcggcggcgctcggatctgttacattttc
cacgagacgttcggccggaccctgcaatccatcgacccgctggcaggactcaccgagctc
gacattctcaccgccatccgaaatgccacgggtccccgtccagcacttttcgttcccgag
gtgagcttcgagctgctggtgaagaagcagattaagagactggaggagccgagtctgcgc
tgcgtcgagctcgtccacgaggagctgcagaggatcatccagcactgctcgtcccacagt
actcaggaactgttgcgctttcccaagctgcatgactccatagtggaggtggtgaccagt
ttactcaggaaacgtcttccaatcaccaacgaaatggtccataatctggtgtcaatagag
ctcgcgtacatcaacactaagcacccggacttcacagatgccgcacaagtgtctgcatca
gtcaacagccaacagactgaatcactggatggaggaaatcactggaagaacgataagatt
ccagtggaggacaaaagctcagtgcctggatttggaagccctaacaaatctgttaaccta
ctggacacggcggtgccggtgtctcggaagctgagctcacgtgagcaacgcgactgcgag
gtcatccagcgcctcatcaagtgctacttcctcatcgtccgcaagaacatccaggacagt
gtgcccaaagcggtgatgcacttcctggtaaactttgtgaaggagcgtctgcagagtgag
cttgtgggtcagctgtacaggcagcctctcctgcaggagctgctcatcgagtctcaggaa
acggcacagcagcgcaccgaggtcgcccacatgctcgaggcactccagaaggctaaccac
ataatctcagagatccgagagacaaacctgtggtag
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