Silurus meridionalis (southern catfish): 124400039
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Entry
124400039 CDS
T08004
Symbol
cacna2d3a
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3 isoform X1
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04010
MAPK signaling pathway
smeo04260
Cardiac muscle contraction
smeo04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124400039 (cacna2d3a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
124400039 (cacna2d3a)
04261 Adrenergic signaling in cardiomyocytes
124400039 (cacna2d3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smeo04040
]
124400039 (cacna2d3a)
Ion channels [BR:
smeo04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
124400039 (cacna2d3a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
VWA
dCache_1
VWA_3
VWA_2
MCP-like_PDC_1
dCache_2
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
124400039
NCBI-ProteinID:
XP_046727478
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All DBs
Position
17:8533374..8771828
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AA seq
1089 aa
AA seq
DB search
MKVLWSHVWCVVCFFFMWTVRSTSVFDVSGTHQGIPPAVVKLWASAFGGEMKSIAAKYSG
SQLLQKKYKEFERSVWVEEIDGLKLVKKLAENMEEMFRKKADAMKRLVEAAEEAHLQHEE
DPNLQYEYFNAVLINEVDEEGNNVELGGEFILQPNEHFNNLSVNLSLSVVQVPTNMYNKD
SAIVNGVYWSEALNKVFVDNFERDPSLIWQYFGSAKGFFRQYPGIKWTPDEHGVIAFDCR
NRKWYIQAATSPKDVVILVDVSGSMKGLRLTIAKQTVSSILDTLGDDDFFNIIAYNEELR
YVEPCLNGTLVQADITNKDHFREHLDKLYAKGIGMLDIALTEAFELLDNFNQTGRGSVCS
QAIMLVTDGAVDMYDSVFEKYNSPDKKVRIFPYLIGRESAFADNLKWMACTNKGYFTQIS
TLADVQENVMEYLHVLSRPKVIDQEHDVVWTEAYIDNTLPQAQKLEDNQGPVLMTTVAMP
VFSTKNETKNKGILLGVVGTDVPVSELLKTIPKYKLGIHGYAFAITNNGYILTHPDLRPL
YEEGKKRKKPNYSSVDLSEVEWEDKEDMLRNAMVNRKTGTFSMEVKKAVDKGRRVLVLHN
DYYYTDIKGTPFSLGVALSKGHGKYFFRGSVTVEEGLHDLEHPDVALADEWTYCNTDEHP
EHRYLSQIEAIKVYLEGGEPHLKCDKELIQEVLFDAVVTAPLEAYWTSLALNKSENSDKG
VEIAYLGTRTGLSRINLFVMPYQLSNQDFLTAEDKEGVFNADHFPLWYKRAAEQVPGTFV
YSLPFNTGSENKSVVLASTAIQLLDERKSPIAAAVGIQMKLEFFQRKFWTASRQCTTLDG
KCSISCDDDDINCYLIDNNGFILVAEDFSLTGVFFGEAEGAVMSKLLSMGSFKRVTLYDY
QAICRIYAESSDSSSSLLDPYFAFLATAKWLLTELVIFLMEFNLYSWWHSHVTAHAQREG
RTMLVPCDTEYPAFISERTIKETTGNIDCEDCIKSFVIQQIPSSNLFLVVVDNKCQCREF
GPITMDPIEIMYNESLKCERLKLQKDRRRPDTCHPFHPEENSMECGQAFNLTPSVMVTFF
ALLIALLPR
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgctttggtcccacgtgtggtgtgttgtgtgtttcttcttcatgtggactgta
aggagcacgtcggtatttgacgtctccgggacgcatcagggaatccctcctgcagttgtg
aagctctgggcttcagcatttggaggagagatgaagtctatagcagccaagtactctgga
tcacagctcttacaaaagaaatacaaagagtttgagcgttcagtatgggtggaggaaatc
gatggcctcaaacttgtgaagaaactggcagaaaacatggaagagatgtttcgtaagaaa
gcagatgccatgaagcgtttggtagaagccgcagaagaggcccacctgcagcatgaggaa
gaccccaacctacagtatgagtatttcaatgctgtgctcatcaatgaggtggacgaggaa
ggcaataatgttgagcttggtggagagttcatcctgcagcccaatgaacattttaacaac
ttgtctgttaacctcagcctcagtgtggtgcaggtacctaccaacatgtacaacaaagac
tcagctatagtgaatggagtgtactggtctgaggcccttaataaggtctttgtggataac
tttgagagagacccatccctcatatggcagtactttggcagtgccaagggtttcttcaga
cagtatcctggtataaagtggacaccggatgaacatggagttatagcctttgactgtaga
aatcgaaaatggtatatacaagcagctacatcacctaaagatgtggtaattctggtggac
gtgagtggcagcatgaaaggtctcagactgactatagccaagcaaacagtctcttccata
ctggacactctgggtgacgatgacttctttaatattattgcttacaacgaggaactgcgt
tatgtagaaccatgtctgaatggaactctggtacaagcagacatcaccaacaaagatcat
ttccgggaacaccttgataaactatatgctaaggggatcgggatgctggatattgctctt
actgaagctttcgaacttcttgataatttcaatcaaacaggtcgtgggagtgtgtgcagt
caagccatcatgcttgtgacggatggagcagtggatatgtatgactccgtctttgaaaag
tacaactcaccggacaaaaaggttcgtatattcccttacctaattggtcgggagtctgcc
ttcgctgataatctcaaatggatggcctgcactaacaaaggatattttactcagatctcc
accttagctgatgttcaggaaaatgtgatggagtacctgcatgtgctaagtaggccaaag
gtgattgaccaggaacatgatgtagtttggactgaggcatatattgataacacacttcct
caggctcaaaagttggaggacaatcaagggcctgtactgatgaccacagtggctatgcct
gtattcagcacaaagaatgaaacaaagaataagggaattctacttggtgtggttggtaca
gatgttccagtgtctgagctcttaaagactatccccaagtacaagctgggcatccatggc
tatgcgtttgctattaccaacaatggctacatcttgacccatccagacctgcgccctctg
tatgaagaaggaaaaaagaggaagaagcctaactacagcagtgtagatctttctgaggtt
gaatgggaggacaaggaggatatgctacgcaatgctatggttaacagaaaaactggaacg
ttctcaatggaagtcaagaaagctgttgataaagggagacgggttcttgtcctgcataac
gactactactacacagacatcaagggaactccattcagtctaggtgtagccttgtcaaag
ggacatggtaaatatttcttcagggggagtgtcactgtggaagaaggactacatgatttg
gagcatcctgatgtggcactggcagatgaatggacatactgcaacacggatgaacaccct
gaacaccgttacctgtctcagatcgaagcaattaaagtctaccttgagggaggagaacca
cacctgaagtgtgataaagagttaattcaggaggtcctgtttgatgctgtggtgaccgca
ccattagaagcttactggaccagtctggctctcaataaatcagagaactctgataaaggt
gtggagatagcgtacctcggcactcggaccggcttgtcacgaattaacttatttgtgatg
ccgtaccaattaagcaatcaagacttcctgacggctgaggataaagagggagttttcaac
gctgatcactttcccctgtggtacaaaagggcagcggaacaagtgccaggcaccttcgtg
tactcacttccctttaatacaggttctgagaataagagtgttgtactggccagcactgct
attcagctactggatgagaggaagtcaccaattgctgcagctgtggggatacagatgaag
ctggagttctttcagagaaaattctggactgccagcagacagtgcactactcttgatggg
aagtgttccatcagctgtgatgatgatgatattaactgctacctcattgacaacaacggc
tttatcctagtggcagaagatttctctttgactggcgtcttcttcggggaggcagagggc
gctgtcatgagcaaactactgtccatgggctcttttaaaagggtgactctgtacgactac
caggccatctgcaggatctacgcagagagcagcgacagttcaagcagtctgctagacccg
tactttgccttcctcgccacggctaaatggctgctgaccgagctcgtcatatttctgatg
gagttcaacctgtacagctggtggcactcacatgttacagcacacgcccagagagaaggt
cggactatgttggttccatgcgataccgaatacccggccttcatctccgagcgaaccatt
aaggagaccacagggaacatagactgcgaggactgcattaagtcgtttgtcattcagcaa
attcccagcagtaaccttttcttggtggtggtggacaataagtgtcaatgcagagagttt
ggacccatcactatggaccccattgaaattatgtataatgaatccctgaaatgtgagcgc
ttaaaattgcaaaaggacagaagacgtccagacacatgccaccctttccatcctgaggaa
aactcgatggaatgtggccaggcgttcaacctgactccgtctgtaatggtgacattcttt
gctttgttaattgcactgttgccaaggtga
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