KEGG   Silurus meridionalis (southern catfish): 124400073
Entry
124400073         CDS       T08004                                 
Symbol
pdlim2
Name
(RefSeq) PDZ and LIM domain protein 2
  KO
K23353  PDZ and LIM domain protein 1/2/3/4
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    124400073 (pdlim2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:smeo04990]
    124400073 (pdlim2)
Domain-containing proteins not elsewhere classified [BR:smeo04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   124400073 (pdlim2)
SSDB
Motif
Pfam: PDZ DUF4749 PDZ_6 LIM PDZ_2 DmmA-like_C FtsA
Other DBs
NCBI-GeneID: 124400073
NCBI-ProteinID: XP_046727569
LinkDB
Position
17:complement(4853378..4910350)
AA seq 365 aa
MAFTVTLTGPSPWGFRISGGRDFKKAITVSKVNPGSKAEKASLQPGDVIMEINGENTGDM
LNVEAQNKIKSSKTQLQLLVERPPPSSPGQTNGISSTEQLVGRFQETLQVRDENQNYREY
SVSSPTSFSSVPYSPESPSSPDRKWGRITPTTKSPVFQSWTPDEKITSHRLSRPLSQEFL
PVDSRCNSVSSRTPTPPDRYSPHSPIDRELPTSPRRNSSDFAMQRFDRESEVYKMIQENK
ESRSAPRQSNTFKMLQEVLEADEQEAALMFPGKLSPNPPKPVSSVAGVQKYHTCEKCGNN
IVTQAVRILDERFRHPECYTCTECGLNLKMRGHFWVGDELFCEKHARQRYQGPGAGYRHP
ISPQH
NT seq 1098 nt   +upstreamnt  +downstreamnt
atggcttttacagtgaccctgactggcccatctccctggggcttcagaatatctggtggg
cgggactttaagaaggccataacagtatccaaggtgaaccctggcagcaaagctgagaag
gcttctcttcaacctggcgatgtcatcatggaaattaacggggaaaatactggtgacatg
ctgaacgtcgaggcgcaaaacaaaatcaagagctccaagacacaactgcagctcctagtc
gagaggcctccgccttcgagtccaggtcaaactaacggaatcagttccacagagcaactg
gtggggcgtttccaggaaaccctgcaagtaagagatgaaaaccagaactacagagagtac
tccgtctccagtcctacatccttctcttcagtcccatactctccagagtcaccctccagc
cctgaccgcaaatggggccgaatcacacccactacgaagagcccagtcttccaatcctgg
actcctgatgagaaaatcaccagtcacagactgtccagaccactttctcaggagtttttg
ccagtggacagtcgctgcaactctgtgtccagtcgaaccccaactcctcctgatcgctac
tcaccacacagtccgattgaccgagagttacccacctcccctcgccgcaacagctcggat
tttgcgatgcagcggttcgatcgtgaatccgaggtgtacaagatgattcaggagaacaag
gagtcgcgttcagctcctcgccagtccaacaccttcaaaatgctgcaagaggtgctggag
gctgatgagcaagaggccgcactcatgtttccagggaagctgtcaccgaatccccctaag
cctgtatcctctgtcgccggagtccagaaataccacacctgtgaaaaatgcggcaacaat
attgtcacccaggccgtgaggatcctggacgagcgtttccgccaccccgagtgctacacc
tgcacagaatgcggcctcaacctgaaaatgcgcggccacttctgggtgggagacgagctg
ttctgcgagaagcacgcacgccagcgctatcaggggcctggagcgggctaccgccacccc
atctcccctcagcactga

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