Silurus meridionalis (southern catfish): 124400073
Help
Entry
124400073 CDS
T08004
Symbol
pdlim2
Name
(RefSeq) PDZ and LIM domain protein 2
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124400073 (pdlim2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
124400073 (pdlim2)
Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
124400073 (pdlim2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
DUF4749
PDZ_6
LIM
PDZ_2
DmmA-like_C
FtsA
Motif
Other DBs
NCBI-GeneID:
124400073
NCBI-ProteinID:
XP_046727569
LinkDB
All DBs
Position
17:complement(4853378..4910350)
Genome browser
AA seq
365 aa
AA seq
DB search
MAFTVTLTGPSPWGFRISGGRDFKKAITVSKVNPGSKAEKASLQPGDVIMEINGENTGDM
LNVEAQNKIKSSKTQLQLLVERPPPSSPGQTNGISSTEQLVGRFQETLQVRDENQNYREY
SVSSPTSFSSVPYSPESPSSPDRKWGRITPTTKSPVFQSWTPDEKITSHRLSRPLSQEFL
PVDSRCNSVSSRTPTPPDRYSPHSPIDRELPTSPRRNSSDFAMQRFDRESEVYKMIQENK
ESRSAPRQSNTFKMLQEVLEADEQEAALMFPGKLSPNPPKPVSSVAGVQKYHTCEKCGNN
IVTQAVRILDERFRHPECYTCTECGLNLKMRGHFWVGDELFCEKHARQRYQGPGAGYRHP
ISPQH
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggcttttacagtgaccctgactggcccatctccctggggcttcagaatatctggtggg
cgggactttaagaaggccataacagtatccaaggtgaaccctggcagcaaagctgagaag
gcttctcttcaacctggcgatgtcatcatggaaattaacggggaaaatactggtgacatg
ctgaacgtcgaggcgcaaaacaaaatcaagagctccaagacacaactgcagctcctagtc
gagaggcctccgccttcgagtccaggtcaaactaacggaatcagttccacagagcaactg
gtggggcgtttccaggaaaccctgcaagtaagagatgaaaaccagaactacagagagtac
tccgtctccagtcctacatccttctcttcagtcccatactctccagagtcaccctccagc
cctgaccgcaaatggggccgaatcacacccactacgaagagcccagtcttccaatcctgg
actcctgatgagaaaatcaccagtcacagactgtccagaccactttctcaggagtttttg
ccagtggacagtcgctgcaactctgtgtccagtcgaaccccaactcctcctgatcgctac
tcaccacacagtccgattgaccgagagttacccacctcccctcgccgcaacagctcggat
tttgcgatgcagcggttcgatcgtgaatccgaggtgtacaagatgattcaggagaacaag
gagtcgcgttcagctcctcgccagtccaacaccttcaaaatgctgcaagaggtgctggag
gctgatgagcaagaggccgcactcatgtttccagggaagctgtcaccgaatccccctaag
cctgtatcctctgtcgccggagtccagaaataccacacctgtgaaaaatgcggcaacaat
attgtcacccaggccgtgaggatcctggacgagcgtttccgccaccccgagtgctacacc
tgcacagaatgcggcctcaacctgaaaatgcgcggccacttctgggtgggagacgagctg
ttctgcgagaagcacgcacgccagcgctatcaggggcctggagcgggctaccgccacccc
atctcccctcagcactga
DBGET
integrated database retrieval system