Silurus meridionalis (southern catfish): 124400098
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Entry
124400098 CDS
T08004
Symbol
tuba5
Name
(RefSeq) tubulin alpha 5 isoform X1
KO
K07374
tubulin alpha
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04145
Phagosome
smeo04210
Apoptosis
smeo04530
Tight junction
smeo04540
Gap junction
smeo04814
Motor proteins
smeo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124400098 (tuba5)
09143 Cell growth and death
04210 Apoptosis
124400098 (tuba5)
09144 Cellular community - eukaryotes
04530 Tight junction
124400098 (tuba5)
04540 Gap junction
124400098 (tuba5)
09142 Cell motility
04814 Motor proteins
124400098 (tuba5)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
124400098 (tuba5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124400098 (tuba5)
03036 Chromosome and associated proteins [BR:
smeo03036
]
124400098 (tuba5)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smeo04812
]
124400098 (tuba5)
04147 Exosome [BR:
smeo04147
]
124400098 (tuba5)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124400098 (tuba5)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
124400098 (tuba5)
Cytoskeleton proteins [BR:
smeo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
124400098 (tuba5)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124400098 (tuba5)
Exosomal proteins of other body fluids (saliva and urine)
124400098 (tuba5)
Exosomal proteins of colorectal cancer cells
124400098 (tuba5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
124400098
NCBI-ProteinID:
XP_046727647
LinkDB
All DBs
Position
17:complement(20008965..20012880)
Genome browser
AA seq
476 aa
AA seq
DB search
MHAGSSSVWSMVWELMVCCRNPSRCLIPRECISIHVGQAGVQIGNACWELYCLEHGIQPD
GNMPSDKTVGGGDDSFNTFFSETGSGKHVPRAVFVDLEPAVIDEVRSGTYRQLFHPEQLI
SGKEDAANNYARGHYTVGKEIIDMVLERVRKLTDQCTGLQGFLIFHSFGGGTGSGFTSLL
MERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC
RRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYS
PIISAEKAYHEQLSVAEITSACFEPSNQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIA
NIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDH
KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGTDSVEDEEEGEEY
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgcatgctgggagctcttctgtctggagcatggtgtgggagctgatggtgtgctgcagg
aatccaagtcgctgtctaattccccgtgagtgtatctccatccacgtcggccaggctggt
gttcagattggcaatgcatgctgggaattgtactgcttagagcatggtatccagcctgat
ggtaatatgccaagcgataagaccgttggtggtggggacgactcctttaacactttcttc
agcgagactggctctggaaaacatgtgccacgagctgtgtttgtggatctggagccggca
gttattgatgaggtgaggtctggcacctacaggcagctcttccacccagagcagctgatc
tctggaaaggaagatgcagcaaacaactatgcccgtggccactacactgttggcaaggaa
atcattgacatggttctggagcgtgtccgtaaactgactgaccagtgtactgggctccaa
ggattcctgatcttccatagttttggtggaggcactggatcaggattcacttccttgctg
atggagcgcctgtctgttgactatggcaagaagtcaaagctggagtttgccatctatccg
gcacctcaggtctccactgctgttgtggagccatacaactctatcctcaccacacacacc
acactggagcactcagactgtgccttcatggtggacaacgaggccatctatgacatctgc
cgccgcaaccttgacatcgagaggccaacatacaccaacctgaacaggctcatcggccag
atcgtctcctcgattactgcgtctctgcgctttgatggtgctctcaatgtcgacctgact
gagttccagaccaaccttgtgccatatcctagaatccatttccccctggtaacctattca
ccaattatctctgctgagaaggcataccatgagcaactttctgttgctgagatcacaagt
gcctgctttgagccatccaatcagatggtgaaatgtgacccacgccatggcaaatacatg
gcctgctgtatgctgtaccgtggagatgttgtgcctaaagatgtgaatgctgccattgcc
aacatcaaaaccaaacgttcaatccagtttgtggactggtgcccaactggattcaaggtt
ggcattaactaccagccaccaactgtggttcctggaggagacctggcaaaggtgcagaga
gctgtgtgcatgctgagcaacaccactgccattgctgaggcctgggcacgtctggaccat
aagtttgacctgatgtatgccaagcgtgcatttgtgcactggtatgtgggtgaaggtatg
gaggagggagagttctctgaggcgagagaggatcttgcagcacttgagaaagattatgaa
gaggttggcacagactctgttgaagatgaagaggaaggagaagagtattga
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