KEGG   Silurus meridionalis (southern catfish): 124400098
Entry
124400098         CDS       T08004                                 
Symbol
tuba5
Name
(RefSeq) tubulin alpha 5 isoform X1
  KO
K07374  tubulin alpha
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo04145  Phagosome
smeo04210  Apoptosis
smeo04530  Tight junction
smeo04540  Gap junction
smeo04814  Motor proteins
smeo05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    124400098 (tuba5)
  09143 Cell growth and death
   04210 Apoptosis
    124400098 (tuba5)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    124400098 (tuba5)
   04540 Gap junction
    124400098 (tuba5)
  09142 Cell motility
   04814 Motor proteins
    124400098 (tuba5)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    124400098 (tuba5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smeo03019]
    124400098 (tuba5)
   03036 Chromosome and associated proteins [BR:smeo03036]
    124400098 (tuba5)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:smeo04812]
    124400098 (tuba5)
   04147 Exosome [BR:smeo04147]
    124400098 (tuba5)
Messenger RNA biogenesis [BR:smeo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     124400098 (tuba5)
Chromosome and associated proteins [BR:smeo03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     124400098 (tuba5)
Cytoskeleton proteins [BR:smeo04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    124400098 (tuba5)
Exosome [BR:smeo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   124400098 (tuba5)
  Exosomal proteins of other body fluids (saliva and urine)
   124400098 (tuba5)
  Exosomal proteins of colorectal cancer cells
   124400098 (tuba5)
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 124400098
NCBI-ProteinID: XP_046727647
LinkDB
Position
17:complement(20008965..20012880)
AA seq 476 aa
MHAGSSSVWSMVWELMVCCRNPSRCLIPRECISIHVGQAGVQIGNACWELYCLEHGIQPD
GNMPSDKTVGGGDDSFNTFFSETGSGKHVPRAVFVDLEPAVIDEVRSGTYRQLFHPEQLI
SGKEDAANNYARGHYTVGKEIIDMVLERVRKLTDQCTGLQGFLIFHSFGGGTGSGFTSLL
MERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC
RRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYS
PIISAEKAYHEQLSVAEITSACFEPSNQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIA
NIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDH
KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGTDSVEDEEEGEEY
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgcatgctgggagctcttctgtctggagcatggtgtgggagctgatggtgtgctgcagg
aatccaagtcgctgtctaattccccgtgagtgtatctccatccacgtcggccaggctggt
gttcagattggcaatgcatgctgggaattgtactgcttagagcatggtatccagcctgat
ggtaatatgccaagcgataagaccgttggtggtggggacgactcctttaacactttcttc
agcgagactggctctggaaaacatgtgccacgagctgtgtttgtggatctggagccggca
gttattgatgaggtgaggtctggcacctacaggcagctcttccacccagagcagctgatc
tctggaaaggaagatgcagcaaacaactatgcccgtggccactacactgttggcaaggaa
atcattgacatggttctggagcgtgtccgtaaactgactgaccagtgtactgggctccaa
ggattcctgatcttccatagttttggtggaggcactggatcaggattcacttccttgctg
atggagcgcctgtctgttgactatggcaagaagtcaaagctggagtttgccatctatccg
gcacctcaggtctccactgctgttgtggagccatacaactctatcctcaccacacacacc
acactggagcactcagactgtgccttcatggtggacaacgaggccatctatgacatctgc
cgccgcaaccttgacatcgagaggccaacatacaccaacctgaacaggctcatcggccag
atcgtctcctcgattactgcgtctctgcgctttgatggtgctctcaatgtcgacctgact
gagttccagaccaaccttgtgccatatcctagaatccatttccccctggtaacctattca
ccaattatctctgctgagaaggcataccatgagcaactttctgttgctgagatcacaagt
gcctgctttgagccatccaatcagatggtgaaatgtgacccacgccatggcaaatacatg
gcctgctgtatgctgtaccgtggagatgttgtgcctaaagatgtgaatgctgccattgcc
aacatcaaaaccaaacgttcaatccagtttgtggactggtgcccaactggattcaaggtt
ggcattaactaccagccaccaactgtggttcctggaggagacctggcaaaggtgcagaga
gctgtgtgcatgctgagcaacaccactgccattgctgaggcctgggcacgtctggaccat
aagtttgacctgatgtatgccaagcgtgcatttgtgcactggtatgtgggtgaaggtatg
gaggagggagagttctctgaggcgagagaggatcttgcagcacttgagaaagattatgaa
gaggttggcacagactctgttgaagatgaagaggaaggagaagagtattga

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