Silurus meridionalis (southern catfish): 124400106
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Entry
124400106 CDS
T08004
Symbol
gle1
Name
(RefSeq) mRNA export factor GLE1 isoform X1
KO
K18723
nucleoporin GLE1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03013
Nucleocytoplasmic transport
smeo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124400106 (gle1)
03015 mRNA surveillance pathway
124400106 (gle1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124400106 (gle1)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124400106 (gle1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
124400106
NCBI-ProteinID:
XP_046727669
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Position
17:complement(11653976..11664150)
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AA seq
715 aa
AA seq
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MPAKSLRWETLEALKNSPKAKIKYTPDWNEMGEDILAGCKEVSSLSPFSEQVLKRLSPQS
VLKSGFCLGSMISDASTSEDGLKINSGLAAVKMCHTLTTTTPTSPLLPPVENELKATDDK
LLSLSSTLDMCSSSPPPFSVHSPKASQMAGCIRICEKKHWAKAKSELKLRQEMQECLVAG
MASRESEQLKRFEEFMELKQRQEYQSMRDMMEKETQESLGRQEKLKEEHRHRKKILNLRL
REAEQQRLRQAELDRQRLLEGRDRLRALNAIQEEVLSLNLLLEPIYTQTSPTLDYTSYVT
RGNHLCSQVSEVVRTTTEGQFPTVEDMTVVERVLQEMRTLVRAIQEEFAQEHEKKKNEQE
EEEYRKKQAEMNTQQEEQKKSTALPFKEGAKKQGLQSVADDSTLKWYKELQSLASRCAQT
FEDLNNTKDKQTKKLRMELQKAATIPVSQISSISGSQLKEIFEKIDKLLLGKLVVSGGKT
VSTSQHPHGLEFVSYKLAEKFVKQGEEEVASHHEAAFPIAVVASGVWEIHPKVGELILAH
LHKKCPYAVPHYPPLKDGSSIEEYQQILGYRVDESGVESHDSFLKRMSGMIRLYAAIIHL
RWPYTNKQGADPHGLNHGWRWLAQMLNMEPLADITATLLFDFLEVCGNALMKQYQGQFWK
LLLLIKEEYFPRIEAVTNSGQIGSITRLNQFLENSLRNKQIEPPKGQLNSAFWRA
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgccagctaaaagtctgagatgggagacgttggaagcgttgaaaaattcaccgaaagca
aaaatcaaatacacgccagactggaatgaaatgggggaggacattttagcaggctgtaaa
gaggtaagtagcctgtccccattctcggagcaagttctgaaaagactgagccctcagtct
gtgctgaaaagtggtttctgtctgggttccatgatctctgatgcaagcacatctgaggat
ggcctgaagataaactctggcttagctgctgttaaaatgtgtcatacattaactaccaca
acgcctacttcaccactgctgcctcctgttgaaaatgagctgaaggcaactgatgataag
ttattgagtttgagctccactttggacatgtgcagcagttcaccaccacccttttctgtc
cactcacctaaggcctctcagatggctggctgcatccgcatctgtgagaagaaacactgg
gcaaaagccaagtcagagcttaaactaaggcaggagatgcaggagtgtctggtggctggt
atggctagtcgagagtcagagcagcttaaacggtttgaggagttcatggagcttaagcag
aggcaggagtatcagagcatgagggacatgatggaaaaagaaacacaggaaagccttgga
cggcaggagaaattaaaggaagaacatagacatagaaagaagatcctaaacctgcgtctg
cgggaagcagaacagcagaggctgaggcaggcagagcttgaccgacagagacttctggag
ggcagggataggctgagagcactcaatgccattcaggaggaagtgcttagtctcaatctc
cttttggaaccaatttacacacaaacaagcccaaccttggattacacatcttatgtcacc
cgtggcaaccacctttgttcccaggtttcagaggtggtacgcacaacaactgaaggacag
tttccaactgttgaggacatgactgtggtagaacgggttctgcaggaaatgagaacactg
gttagagccattcaggaggagtttgcccaggaacatgagaaaaagaagaatgagcaagag
gaagaagagtacaggaagaaacaggcagagatgaacacccaacaagaagaacagaagaaa
agcacagcattaccttttaaagagggtgccaaaaaacaaggcctgcagtctgtagctgat
gatagcaccttgaaatggtacaaagagctgcaaagtttggccagccgttgcgcacagacc
tttgaagatttgaacaacactaaggataagcagacaaaaaaattgaggatggagcttcaa
aaagctgcaacaattcctgtgagccagatctccagtatttcaggttcacagctaaaggag
atttttgaaaagattgataaactgttattagggaaactagttgtgtctggtggaaagaca
gtttccacatcccagcatcctcatggactagaatttgtaagttataaattggcagaaaag
tttgtgaaacaaggagaagaagaggtggcatctcaccatgaagctgcatttccaattgca
gttgtggcttcaggtgtgtgggagattcaccctaaagtaggagaactcatcttagcccat
cttcacaaaaagtgcccttatgcagttcctcactaccccccattgaaggatggcagctct
attgaagaatatcagcagattctgggatatcgtgtggatgaatcgggtgtggaaagtcac
gacagtttcttaaaaaggatgtctggaatgatccgactttatgcagcaataatacaccta
agatggccttacactaacaaacaaggggcagaccctcatggactcaatcatggctggcgt
tggttagctcagatgcttaacatggaacctcttgctgacattacagcaactcttctgttt
gactttctagaggtttgtggaaatgcactaatgaaacaataccaaggacagttttggaaa
cttctgctcctcatcaaagaggaatactttcccaggattgaagcagtaaccaacagtggt
cagattggctctattacaagacttaatcagtttttggagaattccttaagaaacaagcag
attgagccaccgaaaggacaactgaactcagccttctggagagcctga
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