Silurus meridionalis (southern catfish): 124400107
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Entry
124400107 CDS
T08004
Symbol
arid4b
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 4B
KO
K19195
AT-rich interactive domain-containing protein 4B
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124400107 (arid4b)
03036 Chromosome and associated proteins [BR:
smeo03036
]
124400107 (arid4b)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Helix-turn-helix
ARID
124400107 (arid4b)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
124400107 (arid4b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RBB1NT
ARID
Tudor-knot
Tudor_2
MSL3_chromo-like
PWWP
KIF2A-like_1st
Motif
Other DBs
NCBI-GeneID:
124400107
NCBI-ProteinID:
XP_046727674
LinkDB
All DBs
Position
2:complement(25692621..25858332)
Genome browser
AA seq
1269 aa
AA seq
DB search
MKTLEEPAYLTVGTDVSAKYRGAFCEAKIKTAKKLVKAKVTFKPDSSTAEVHDEHIRGNL
KVGAVVEVKNQDGIYQEATITKLTDASLYTVVFDDGDEKTLRRSSLCLKGARHFAESETL
DRLPLTNPEHFGTPVIGTKGNRGRRSNAIQEEESSSSSSEEEDGDPQQSEELYGKVVVVE
GVSTEDKMKTFWFPALVISPDCHEDVMMKKDSVFVRSFKDGKFYMILRKDIKELDSEMDP
KAEASLKPVMSAAWNFQCSGTVPSSWRTEVKYESSSSEENEEEEEEVQEEGGTSEEEEEE
VEPFPEERDNFLQQLYKFMEDRGTPINKRPVLGYRNLNLFKLYRLVHKLGGFNSIESGSV
WKQVYQDLGIPVLNSAAGYNVKCAYRKYLYGFEDYCTSTGITFHFDLPFKATESSHTDSS
IEGPAERTNHVHPRPDPEISLSMKKIVKEGKSEEAELFRNKVNSRSPKDEDMMYSDEDSS
TDKELKLKVEESSPAEDSCTENVKVEPCKDQNRDLLRDDSSQEWEEGEEFECYPPGMKVQ
VRYGRGRNQKTYEATVKESDLEGGEVLYLVHYCGWNVRYDEWIKADKIIRPANKNVPKIK
HRKKIKNKIEQERDRIGSLNDREDYSPIDIQNNQSSSLGSGNGVFPKMEEFKDASGQKSP
VKSSNVSELQAPVCSTDYCNHEQDEEGDHINGPPAGKLSPLRRAFPEILQTALQWESEPP
NEGDKASVKTSTLMPSTAQKNKQLVTEGEASNTRRRKTEGTTDTRIHKIQRKLKTRGSKL
SDWLSESSLKKLEQRNTKPQDESMQSSSSSEEESDSLMESQAKEELLMHHKGKSVPSTKY
MSLNDKSKGGRSSTFWEIPDKQAKITSGMDDRTPGCRSKGQKDVWSSIQAQWPKKTLKEL
FSDSDTEAANSPPQVTPCLSELEPKQKNETHEELQEGQEKNQEYPSSGSNSILNTPPTTP
ESAEVLCQRHLSSPPPQSSVLVSCSPATSSSAGLLIEECVDGRNDCDTSMVEMDIVSCEF
HMLPQEDQSGSPSKIFEANLSSNSSCSLSLSSSSQQEIEQKSKESSCNQKRHRDSQEGGA
LKKHKPSHKTLTLNTKKNHKSANSSDSEDQCLSEMAAKALISKCSTQDTKAIIPPKGSAR
TSLSHKYHKHTDSEHLYPKEQQSSRGSRTYKWSFQMSDLEKMTSLEKIAFLQEKLQDIRN
HYLLLKSEVASIDRRRKRIKKKEQESAAVLYSSSSSPSSSSLTAAVMLTLAEPTVSGSSQ
NSGVSLECR
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atgaagactctagaggagcctgcatacctgactgtcggcacagacgtgagtgccaagtac
cgtggggcattttgtgaggctaagatcaagactgccaagaaacttgtcaaggccaaggtg
acctttaagccagactcatccactgctgaggttcatgatgaacacatcagaggaaacctg
aaggtgggtgctgtggttgaagtcaaaaatcaagatggaatctatcaggaagctaccatc
accaagctcacagatgctagtttgtacacagttgtttttgatgatggggatgagaaaacc
ttgaggcgttcgtccctgtgccttaaaggagcccgtcactttgctgagagtgagacactt
gacaggcttcccttgaccaatcctgagcactttggcactcctgtcattgggacaaaaggc
aaccgggggcgtcgctctaatgccatacaagaagaagaatcctcatcctcatccagtgaa
gaagaagatggtgacccacaacaaagtgaggaactttatggaaaggtagtggttgtggaa
ggtgtttccacagaggataaaatgaagacattctggttccctgccctagtcatttctcca
gattgtcatgaagatgtcatgatgaaaaaagacagcgtgtttgtccgttccttcaaggat
gggaagttttatatgattttacggaaagacattaaggaacttgatagtgaaatggatcca
aaagcagaagccagccttaagccagtgatgagtgcagcttggaatttccagtgcagtggt
actgtgcctagttcatggagaactgaggttaagtatgaaagttccagcagtgaagaaaat
gaggaggaggaagaggaagtacaggaggaaggtggcaccagtgaagaggaagaggaggag
gtggagcccttcccagaggagagggacaattttctccaacagctttacaaattcatggag
gatagaggcacacccatcaacaaaagaccagtgctcggctacagaaacctgaacctcttt
aaactctacaggctggtgcacaaacttggaggatttaactctattgaaagtggatctgtt
tggaaacaagtctatcaagatctgggaatccctgtgttgaactctgctgcaggttacaat
gtcaaatgtgcctacagaaagtatctttatggttttgaggactactgcacctcaacgggg
atcacattccactttgacctcccatttaaagcaacagaaagttctcacacagatagtagt
attgaaggaccagcggagagaacaaaccatgttcacccaagacctgatccagagatttca
ctaagcatgaaaaaaattgtcaaggagggaaaatcagaagaagcagaactttttagaaac
aaagtgaatagtcgaagcccaaaggatgaagacatgatgtatagtgatgaagacagtagt
acagataaagagctcaaactcaaagttgaagagtcttcaccagcagaagactcatgcaca
gagaatgtaaaggtggaaccatgtaaggaccagaacagagatctgttacgggatgacagc
agtcaggagtgggaggaaggggaggagtttgagtgttacccccctgggatgaaggtgcag
gtgaggtatgggcgaggtcgcaatcagaagacatacgaagccactgtgaaagagtcagac
ctggaggggggagaggtgctctacctggtacactactgtggctggaatgtcaggtatgat
gagtggattaaagctgacaagattattcgaccagctaataagaatgttcccaaaataaag
cataggaaaaaaattaagaacaaaattgaacaagaaagagaccgaatagggagtttaaat
gacagagaggactattctcctatagacattcaaaacaatcaatcctcaagccttggctct
ggcaatggagtttttccgaaaatggaagaatttaaagatgcaagtggccagaagagtcct
gttaaatcctccaatgtcagtgagctccaagcacctgtatgttccacagattattgcaat
catgagcaggatgaggaaggtgaccatattaatggccctccagcaggcaagctaagtccc
ctgagaagagcttttccagaaatccttcaaactgctttacaatgggaaagtgaaccaccc
aatgagggagacaaagcttctgtgaaaacaagcaccctgatgcccagtacagcccagaag
aataaacaactagtaacagaaggggaggcctcaaacaccagaagaagaaaaactgaagga
accactgatacacgtatacataaaatccagcgaaaactcaaaaccaggggcagcaagtta
agtgattggttgtcagagagttcattaaaaaagctggaacagagaaatactaagcctcag
gatgaatccatgcagtccagtagcagttctgaggaggagagtgactctcttatggaatcg
caggccaaagaagagctgctaatgcaccacaaaggcaagagtgtaccctctacaaagtac
atgagcctgaatgataagtccaagggtggccggtcttcaacattctgggaaatccctgac
aaacaagctaagattacgtctggaatggatgataggacacctggttgtcgttccaaaggc
caaaaggatgtatggtccagtattcaggctcagtggcctaagaaaaccctgaaagagcta
ttttctgattcagacactgaagctgcaaattcccctcctcaagtcacaccttgcctgagt
gagctggagcccaagcagaaaaatgaaacacatgaggaactgcaggagggccaagagaag
aaccaagagtatcccagcagtggaagcaactctatcctcaacacaccacccacaacccca
gagtctgctgaggtcttatgtcagaggcacttatcctcaccaccccctcagagttctgtc
ttggtatcctgctctccagccacatcctcatcagctggacttttgatagaagagtgtgtt
gatgggcgcaatgattgtgacactagtatggtggagatggatattgtgagctgtgaattt
cacatgctgcctcaggaagaccagtcagggtccccctccaaaatttttgaggcaaacctg
tccagtaacagcagctgcagtctgagtttgagcagcagcagtcaacaggagattgagcag
aaatctaaagagtcatcatgcaatcagaaacggcatagagactcccaggaaggtggagca
ttaaagaaacacaaaccaagtcacaagactttgaccttgaataccaaaaagaaccataaa
tcagccaacagtagtgacagtgaggaccagtgtctcagtgagatggctgctaaagcactt
atatcaaagtgcagtacccaagacacaaaggcaataattcctcctaagggctcggctcgg
acatccctatcccataaataccacaaacatacggattctgagcatctatatccaaaagag
cagcagagcagccggggttcccgcacatacaaatggagttttcaaatgtctgatttggaa
aagatgactagcctagagaagattgcatttcttcaggagaaattacaggacatcaggaat
cactatctcttgctcaaatctgaagtggcctccattgacagaagacgaaaacgtattaag
aaaaaggagcaggaaagtgcagcagtgttgtactcctcttcttcctcgccatcatcaagc
tcactgacagcagctgttatgttgacgcttgctgagcccacagtctcaggctcgtcacaa
aactctggggtctcactggagtgcaggtga
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