Silurus meridionalis (southern catfish): 124400150
Help
Entry
124400150 CDS
T08004
Symbol
xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
124400150 (xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smeo03400
]
124400150 (xpc)
DNA repair and recombination proteins [BR:
smeo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
124400150 (xpc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
124400150
NCBI-ProteinID:
XP_046727724
LinkDB
All DBs
Position
17:21360247..21377540
Genome browser
AA seq
821 aa
AA seq
DB search
MAKHKRRAEAAVSEKDTAKKKNQAVKKSKTAPKTRAIKADKVTRAKTIAKAVKPRGQASK
NARKPSDGKKSKYFSEPLKEEPEDIFEDSSMSLPESSVLKSNDSNIKEEKKENDNTSEES
DEDEDWEEVEELAGPLGPAEEADQEPAVPSQPVEIEIETAEARLKRQKKENKQAEFEMYL
RRAMKRFTKEIQMDTHKVHLLCLLASGLFRNRLCCEPDLLAITLSLVPPHFTTVYKKRIN
TVYLEDLLKWFKETFTLNPALPEEKDVRLEELLERRLGSLSARDHQEMTYLFLLVLRSLR
LYCRLVLSLQPISFKPTTKTGKAKTSRSPPSKDKSNKADKKPPEPKISLGSKRPSSSAEG
QPKKGGKRQKRNVEDREVKKKEVDGQRPKNTRRRSTASKVSYKEESSDGDEELSDDEEFQ
PTSEEDSDDLVDAKKSKGKEKGKSQASRRSSKTKKKTRRDEEEEKEDEEEEDYDDEEEDE
LVCKKQWRRKRQGKGNDEWIEVYLKEAKKWICIGVDQGVDHPKLCSNQATQPITYVVGID
DNGYLKDVSSRYDPTWLTSSRKRRIDSEWWKETLGFFECPDSKQKQIEDKELQETLMNKP
LPTSISEYKNHPLYALERHMLKYEALYPTTATILGYCRGEPVYSRDCVHTLHSRDIWLKQ
ARTVRLGEEPYKMVKGSSNRSRKARMMSENKENKDLALFGHWQTEEYQPPVAINGKIPRN
DFGNVYMFQPCMLPVGCVHLHLPNLNRVARKLNLDCAPAVTGFDFHGGYSHAVIDGYIVC
EEHEEILKAAWENEQEIQKRKEKRSGRSEHWQTGHCWLKVC
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacataaacgccgggcagaagctgctgtgagtgaaaaggacaccgcgaagaag
aagaatcaggcggtgaagaagagcaaaactgcccctaaaacgcgggccatcaaagcagac
aaggttaccagagccaaaactattgcaaaggctgtcaagcccagaggccaagcatcgaaa
aatgcacggaagccgtctgatggaaagaagagcaaatacttcagcgagccattaaaagaa
gagcccgaggacatttttgaagattcgagcatgtcacttccagagagttctgtgctaaag
agcaacgattccaacataaaagaagagaaaaaagaaaacgataacacgagtgaggagagt
gatgaagacgaggattgggaggaagtggaagaacttgcaggcccattaggaccagcagaa
gaggcagaccaagaacctgcagttccttctcagcctgtggagattgagattgagacagct
gaggccaggctcaagagacagaaaaaggaaaacaagcaagctgagtttgagatgtacctg
cgcagagcaatgaaacgtttcaccaaggagatacagatggatacacacaaggttcatctc
ctatgtttattggctagcggactgttccggaaccgcctgtgctgtgagcctgacctattg
gccatcactttgtctttagttcccccccacttcaccacagtttataaaaaacgtatcaac
accgtctatctggaggatcttctaaagtggtttaaggagacgttcacactaaacccggct
cttcctgaagagaaggatgtgagactggaagagctgcttgagagacgtttgggaagtctg
tctgctcgtgatcatcaggagatgacctatctgttcctgttggtgctgaggtcactgcgc
ctctactgtcgactggtgctttcactacagccaatatccttcaagccaacaacaaaaacg
ggtaaagcaaagacctccagaagtcctccttctaaagacaaatctaataaagctgataaa
aagccaccagaacccaaaatttccctggggtccaaacgcccatcttccagtgcggagggg
cagccaaagaaaggaggaaagagacagaaaagaaatgttgaggatcgagaggtcaaaaag
aaagaagtagatggacaaaggccaaaaaataccagaagaagaagtactgcatccaaagtg
tcatataaagaggagagcagtgacggggatgaggagcttagtgatgatgaggagtttcag
ccgaccagtgaggaagacagtgacgatttggttgatgcaaaaaagtcaaagggtaaagaa
aagggcaaaagtcaggcttcacgacgttctagcaagaccaagaagaaaaccaggagggat
gaggaggaggaaaaagaagatgaagaagaagaagactatgacgacgaagaagaagatgag
ctagtatgcaaaaagcaatggaggagaaagaggcagggaaaaggcaatgatgaatggatt
gaggtgtacctgaaagaggcaaagaaatggatatgcattggtgtcgatcaaggggtggac
cacccaaagctctgctccaaccaggccactcagccaattacgtatgttgtgggtatagat
gataacggttacctgaaagacgtgagcagcagatacgaccccacctggctcacgtcgtca
cggaaacggcgtatcgactcagagtggtggaaggagactttaggcttcttcgagtgtcct
gattctaaacaaaagcagatagaagacaaagagctgcaggagacgttgatgaataagcca
ttgccaacatccatatcggagtataaaaaccaccctctgtatgcattggagaggcatatg
ctgaagtacgaggcactgtaccccaccactgccaccattttgggctattgtcgaggagaa
cctgtctattcacgggactgtgtccacaccctgcattccagagacatctggttgaagcaa
gcacgcaccgttcgattgggagaggagccttacaagatggtaaagggcagctcgaaccgt
tcccggaaagccaggatgatgtctgagaacaaagagaacaaggacctggccctgttcggc
cactggcaaactgaggagtaccagcctcctgtagccatcaatggcaagattccacgtaac
gattttggaaacgtgtacatgtttcaaccgtgcatgttgccagtggggtgtgtgcacttg
catctgcctaatctgaacagagtggctcgaaaactcaacttggactgtgctcctgctgta
acaggcttcgatttccatggaggatactcgcatgctgtgattgacggctacattgtctgt
gaggaacatgaggagattctgaaagctgcctgggaaaatgagcaagagattcagaagcgg
aaagaaaagagaagcgggagaagcgagcattggcaaactggacactgttggttaaaggtc
tgctga
DBGET
integrated database retrieval system
