Silurus meridionalis (southern catfish): 124400158
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Entry
124400158 CDS
T08004
Symbol
fmodb
Name
(RefSeq) fibromodulin
KO
K08121
fibromodulin
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
124400158 (fmodb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
smeo00535
]
124400158 (fmodb)
Proteoglycans [BR:
smeo00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
124400158 (fmodb)
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Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_9
LRR_6
LRR_14
LRRNT
LRR_LRWD1
LRR_NLRC4
Motif
Other DBs
NCBI-GeneID:
124400158
NCBI-ProteinID:
XP_046727749
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All DBs
Position
17:5909448..5913221
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AA seq
359 aa
AA seq
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MWIKFLLWAGLVHFSFAQSDSISWLNYLRSRSYRYRYVSNHGDYYASLQAQHDTEAQDCP
LECECPPAYPNAMYCHNRNLQHVPFVPSRMKYVYLQNNRITGITDGVFDNATELVWIILH
MNQLKSDKISSKVFAKLPKLERLFLQHNKLEQVPEGLPHSLQDLRLDHNAITTVPPGSLR
GINNLTALRLHYNAIQELGGAVESLASLSFLDLRGNQLSKVPKQLPTKLSQLYLDNNLIS
SVPVDFVKKRPELRFMRLSHNRLTDAGVPPNTFNVSTLTELDLSHNKLEKIPAISTSLQN
LYLQANRIKEFSISSFCQVINVDNYSNLQVLRLEGNKISPRDVPPEALLCLRKATSINL
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgtggattaagtttttgctgtgggcggggcttgtgcatttctccttcgcccaaagtgac
tcgatctcctggcttaactacttgcgcagtcgatcctacagatacagatacgtctcgaat
catggtgactactacgcgtcccttcaagctcaacatgacactgaagcacaagactgcccc
ctggagtgcgagtgccctccggcctaccctaacgccatgtactgtcacaaccgcaaccta
cagcacgtgcccttcgtgccctcacgcatgaagtacgtgtacctgcagaacaaccgcatc
actgggatcacagacggggtttttgacaatgccaccgagctcgtgtggatcatcctgcac
atgaaccagctgaaatctgacaaaatcagcagcaaggtctttgccaagctgcccaaacta
gagcgtctattcttgcagcacaacaaacttgagcaggtcccagaaggacttcctcattcc
ctccaggacctgcgtttggaccacaacgccatcacaactgtgcctcccgggtccttgcgt
ggaattaataatctaacagctttacgtctgcattataacgccattcaggagcttggaggt
gctgtagagtccctggcctcactcagctttctggatttgcgtgggaatcagttgtctaag
gttcccaagcagcttccaaccaagctgagtcagctgtacctcgacaacaacctcatctct
tctgtgcctgtggactttgtgaagaagcgacccgagctacgctttatgcgcctctcacac
aatcggctcaccgacgctggagttccaccaaacactttcaatgtgagcacgctcacggag
ctggacctgtcccacaacaaactggagaagattccagccatcagcacaagcctccagaac
ctctaccttcaggctaatcgcatcaaagaattctccatcagcagcttctgtcaagttata
aatgtggacaactactccaacctgcaagttttgcggctggagggaaacaagatcagccct
cgtgatgtgccccctgaggctctgctctgcctgcgcaaagccacaagtatcaacctttag
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