Silurus meridionalis (southern catfish): 124400186
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Entry
124400186 CDS
T08004
Symbol
tbc1d25
Name
(RefSeq) TBC1 domain family member 25 isoform X1
KO
K24799
TBC1 domain family member 25
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124400186 (tbc1d25)
Membrane trafficking [BR:
smeo04131
]
Others
Specific organelles associated proteins
Auto phagosome
124400186 (tbc1d25)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
124400186
NCBI-ProteinID:
XP_046727792
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All DBs
Position
17:16481962..16493846
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AA seq
891 aa
AA seq
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MSAEEEERGVVRVKVKKFEGLQPVEFRSFAVDPQITSLEVLQHILIRAFELNGRRNFGIS
YLSRDRLGAEVYLSLLSDWDLDAAFVSAAKPHLQLKMEIKPSEDSPVLEDWDIISPKDVI
GSDQLQGEKRSLTSTALPFTQSLLSQVTDDVPHPVSQLFYQPVSAAFSQMGRTLSRVQQA
LSWSYGEEVKPFKPPLSDAEFHSYLNGQGQLSRPEELRLRIYHGGVEPSLRKVVWRYLLN
VYPDGLTGQERMDYMKRKTREYDQLKSEWASRVSPEDLEFIRGNVLKDVLRTDRAHPYYA
GSEDSPHLTALTNLLTTFAITHPQVSYCQGMSDIASPILAVMDNEAHAFICFCGIMKRLE
GNFRPDGQLMSIKFQHLKLLLQYSDPEFYTYLVSKGADDLFFCYRWLLLELKREFAFDDA
LRMLEVTWSSLPPDPPETEVELLGLPFEEDESPNHEGSCPNSENEKLEKEQTEQRRRHML
RPSREEADGERSFSLDAESREEKPSSSEDKGVYGGNCVAKTEGSATPLEKQSSFGEFKYY
SARNEDSFEAKENESSDPTISSVMFQSTHSLPLAVRQSTDDSEDDPGERQPLISEKDQLS
PSQTEKKSSLSGQTDSPLPPTLLSWKNGPQFSATSPLMTSWRAICSDVPGSKSIPSVGSA
VSPDKVLGRFMSSAAVSNGTGVHSPSTPTGKSALSSPSMGNNRSLLSSPVLSFAKSPSQP
KPFSSNLSSPCKLSGTGANTPTTGKPDPGSIKPCSLPPPQEFGKGNPFMLFLCLSILLEH
RDHIIKNSLDYNELAMHFDRLVRKHNLSRILQRAKALFADYLQSEVWDSEEGDEVSLDSP
TTAASSPQTLTKNSFSNLQPSMASSPNSTYNLASTIPSPTTPNDLSPSSYR
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccgaggaggaggagaggggagtagttcgagtcaaagtcaagaaatttgaagga
ttgcagccagtggaattccgctcttttgctgtagatccacagatcacatcactggaggtg
ctgcagcacatcctgatacgagcctttgagctcaatgggaggcgtaattttggcattagt
tacctttcccgggatcgccttggtgcagaggtctacctctctctcctgtctgattgggat
ttagatgctgcatttgtcagtgcagctaagcctcacctccagctaaagatggaaatcaaa
ccttcagaagacagtccagtgcttgaggactgggacatcataagcccgaaggatgtgatt
ggctcggaccagctacagggagagaagaggtcgctaacatccacagctcttcccttcacc
cagtccctgctgtcccaggttactgatgatgttcctcacccagtcagccagctgttttac
cagccagtctctgctgcgttcagtcagatgggtcggacactgtctagggtccagcaggca
ttaagctggtcatatggggaggaggtgaaaccattcaagcctccacttagtgatgcagaa
tttcacagttatctgaacggccagggtcagctgtcacggccagaagagctgcgactccgt
atttatcatggtggggttgagccatccctgcgcaaggtagtgtggcgttaccttttaaat
gtgtaccctgatggcctgacagggcaggaacggatggattacatgaagagaaaaacgaga
gaatatgaccagctaaaaagtgagtgggcatccagggtaagcccagaggatctggagttc
atccgaggaaatgttttaaaagacgtgcttcgaacagaccgagcccatccgtattacgcc
ggttcagaggacagtccacatttgaccgcactgaccaacctcctaaccacttttgccatc
acacacccgcaggtgtcttattgtcaaggtatgagtgatattgcctctccgatccttgcg
gtcatggacaatgaagcacatgcgtttatttgcttctgtggtataatgaagcgcctagaa
ggcaacttccgccctgacggccaactaatgtctattaaattccaacaccttaagttgctc
ttgcaatactcagatcctgaattttacacctacctagtctccaaaggtgctgacgacctc
tttttttgttaccgctggctgcttctcgagctaaagcgggagttcgcttttgatgatgca
cttaggatgttggaggtgacgtggagctctctgcctccagacccaccggagacagaggtc
gagcttcttgggctaccgtttgaagaagacgagtccccgaatcatgaaggcagttgccca
aactcagagaatgaaaagctggaaaaagaacagacagagcagcgtcggcgacacatgctg
aggccgtcccgagaagaggcagacggggaacgtagttttagcttagatgcagagagtagg
gaagagaagccatctagtagcgaggacaaaggagtttatggtgggaattgtgtggcgaaa
acagaaggctcagcaactcctttggagaaacaatccagttttggagaatttaagtactac
agtgcacgaaacgaagacagttttgaagctaaagaaaatgaatcatcagatcccacaata
tcttcagtaatgtttcaatccacacattcattacctctggctgtccgtcaatccacagac
gacagtgaggatgatccaggtgagaggcagcctttgataagcgagaaagaccaactatca
ccttctcagactgagaagaaaagctctctcagtgggcaaacagattctccccttcctcca
actttactgtcttggaaaaatggccctcagttttctgcaacatctcctttaatgaccagc
tggagggcaatatgttctgatgttccaggatcaaagtccatcccctcagtgggtagtgct
gtatctcctgataaggttttggggagatttatgtcttcagctgctgtgtctaatggaact
ggtgtgcactcaccatcaacccctacagggaagtcggcactttcctccccatccatgggc
aacaaccgctcactgctgtcctcccctgtgttatcctttgctaaatctccatcacaacca
aaaccattctccagcaacctttcatccccatgcaaactttcaggaactggtgcgaatact
ccaactacaggtaaacctgaccctggtagtattaaaccctgttcccttcctcctcctcaa
gagtttgggaaaggaaatcctttcatgctgttcttgtgcctctccatcctgttggagcat
cgtgaccatataattaaaaatagtttagattataatgagctagccatgcattttgatcgc
ttggtccgaaagcacaaccttagtcgtattcttcagcgtgcaaaggccctgtttgctgat
tacctccagagtgaagtgtgggactctgaggaaggtgatgaggtcagtttagactcgcca
accacagctgcctcctcaccacaaacactcacaaaaaacagtttttctaacctgcagccc
tcaatggcctcctctccgaactctacatataatctggcctctacgattccttcccctacc
acccctaatgatctctctccctcatcctacagatga
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