KEGG   Silurus meridionalis (southern catfish): 124400200
Entry
124400200         CDS       T08004                                 
Symbol
rab7b
Name
(RefSeq) ras-related protein Rab-7b
  KO
K07897  Ras-related protein Rab-7A
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo04137  Mitophagy - animal
smeo04140  Autophagy - animal
smeo04144  Endocytosis
smeo04145  Phagosome
smeo04148  Efferocytosis
smeo05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    124400200 (rab7b)
   04145 Phagosome
    124400200 (rab7b)
   04140 Autophagy - animal
    124400200 (rab7b)
   04137 Mitophagy - animal
    124400200 (rab7b)
   04148 Efferocytosis
    124400200 (rab7b)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    124400200 (rab7b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:smeo04131]
    124400200 (rab7b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:smeo04147]
    124400200 (rab7b)
   04031 GTP-binding proteins [BR:smeo04031]
    124400200 (rab7b)
Membrane trafficking [BR:smeo04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    124400200 (rab7b)
Exosome [BR:smeo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   124400200 (rab7b)
  Exosomal proteins of other body fluids (saliva and urine)
   124400200 (rab7b)
  Exosomal proteins of colorectal cancer cells
   124400200 (rab7b)
  Exosomal proteins of bladder cancer cells
   124400200 (rab7b)
GTP-binding proteins [BR:smeo04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    124400200 (rab7b)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA RsgA_GTPase cobW ATP_bind_1 PduV-EutP nSTAND3 Septin AAA_16 AAA_7 AAA_22 NTPase_1 AAA_24 G-alpha ATPase_2 AAA_5 ATP-synt_ab SRPRB NACHT MCM AAA_14 DAP3
Other DBs
NCBI-GeneID: 124400200
NCBI-ProteinID: XP_046727824
LinkDB
Position
17:3801802..3811894
AA seq 206 aa
MASRKKVLLKVIILGDSGVGKTSLMNQYVNNKFSNQYKATIGADFLTKEVMVDDRLVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVTSPNTFKTLDSWRDEFLIQASPRDPENFPF
VVLGNKMDLENRQVTTKRAQAWCQSKNNIPYFETSAKEGINVDQAFQTIARNALKQENAG
DPSPDFPEPIKLRDEKPANPNDICSC
NT seq 621 nt   +upstreamnt  +downstreamnt
atggcctctcgcaagaaggtgctgcttaaggtgatcatccttggagattctggggttgga
aagacttctctaatgaaccagtatgtcaataacaagtttagcaaccagtacaaggccacg
atcggcgccgactttttgaccaaagaggtgatggtggacgacaggctggtcaccatgcag
atttgggacacggccggccaggaacgttttcagtctctgggcgtggcgttctacaggggc
gccgactgctgcgtgctggtctacgacgtcacttctccaaacacctttaagactctggac
agctggagggatgagttcctgatccaagccagccctcgcgaccccgagaacttcccattt
gtcgtgctcggaaacaagatggacttggagaacagacaggttactacaaaacgagcccag
gcctggtgtcaaagcaagaacaacatcccgtattttgagaccagcgccaaagaagggatc
aacgtggaccaggcgttccaaaccatcgctcgcaatgcactcaaacaggagaatgcaggg
gacccgagcccggactttccagaaccgatcaagctaagagacgagaaacctgcaaacccg
aacgatatctgcagctgctga

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