Silurus meridionalis (southern catfish): 124400221
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Entry
124400221 CDS
T08004
Symbol
wnt5a
Name
(RefSeq) protein Wnt-5a
KO
K00444
wingless-type MMTV integration site family, member 5
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04150
mTOR signaling pathway
smeo04310
Wnt signaling pathway
smeo04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
124400221 (wnt5a)
04150 mTOR signaling pathway
124400221 (wnt5a)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
124400221 (wnt5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
smeo00536
]
124400221 (wnt5a)
Glycosaminoglycan binding proteins [BR:
smeo00536
]
Heparan sulfate / Heparin
Morphogens
124400221 (wnt5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
wnt
Motif
Other DBs
NCBI-GeneID:
124400221
NCBI-ProteinID:
XP_046727854
LinkDB
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Position
17:complement(8827389..8840739)
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AA seq
374 aa
AA seq
DB search
MLVMNRPSSSGWVKAMGTRHGVVAITFLAFFMQVVVEATSWWSLAMNPLLVPEAYIIGAQ
PLCSQLAGLSKGQKKLCQLYQDHMQYIGEGAKTGIRECQYQFRHRRWNCSTVDNSSVFGR
VMQIGSREAAFTYAISAAGVMNAVSRACREGELSSCGCSRAARPKDLPRDWLWGGCGDNL
NYGYRFSREFVDAREREKAYEKTTTENARLLMNLHNNEAGRMMASDLAHVSCKCHGVSGS
CSLKTCWLQLADFRKVGDALKEKYDSAAAMKVNTRGKLVQVHSKFNPPTTHDLVYVESSP
DYCVQNHSTGSLGTQGRLCNKTSEGMDGCALMCCGRGYDQFKATLVERCHCKFHWCCYVK
CKRCTRVVDQFVCK
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtcatgaacaggccatcttcctcgggctgggtcaaagccatgggcacgcgacat
ggagtggttgcaatcacatttcttgccttcttcatgcaagtggtggtggaggctacctca
tggtggtctctggctatgaacccactgctggttcccgaggcttacatcataggcgctcag
ccgctttgcagtcagttggcaggcttgtccaaaggccagaagaagctgtgccagctgtac
caggaccacatgcagtatatcggcgagggcgccaagacagggatccgggagtgccagtac
cagttccgccatcgacgctggaactgcagcacagtggataattcctcagtatttggccgt
gtcatgcagattggaagccgcgaggcagcatttacatatgcaatcagcgctgcaggcgta
atgaatgcagtgagccgagcatgcagggagggtgagttgtcgagttgtggctgcagcagg
gcggccaggcccaaagatcttccacgagactggctctggggaggttgtggagacaacctg
aactacggctatcgcttcagcagggagtttgtcgatgctcgtgaacgagaaaaggcatac
gagaaaactactacggagaacgcacgactcttgatgaatctccataacaacgaagctggg
cggatgatggcatctgacctggcccacgtatcatgtaagtgccacggggtttcgggttca
tgcagcctgaagacctgctggctccagctggccgatttccgtaaagtgggtgatgcgctt
aaagagaagtatgatagtgcagcggccatgaaggttaacacacgtggcaagctggtgcag
gtgcactctaagttcaacccgcccaccacccacgatctggtgtatgtggagtccagcccg
gactactgtgtgcagaaccacagcacaggctcgctgggcacgcaagggcgtctctgcaac
aagacctccgagggcatggacggttgcgcgctcatgtgctgcggtcgtggctacgaccag
ttcaaggccacactggtcgaacgctgccactgcaaatttcactggtgctgctacgtcaag
tgcaagcgctgcacaagggtcgtcgatcagtttgtgtgcaagtag
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