Silurus meridionalis (southern catfish): 124400248 Help Entry 124400248         CDS       T08004                                  Symbol nphp4 Name (RefSeq) nephrocystin-4 isoform X1   KO K16478   nephrocystin-4 Organism smeo  Silurus meridionalis (southern catfish) Brite KEGG Orthology (KO) [BR:smeo00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:smeo03037]     124400248 (nphp4) Cilium and associated proteins [BR:smeo03037]  Primary cilia and associated proteins   Nephronophthisis-related proteins    124400248 (nphp4) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Other DBs NCBI-GeneID:  124400248 NCBI-ProteinID:  XP_046727898 LinkDB All DBs Position 17:20661268..20864791 Genome browser AA seq 1405 aa AA seqDB search MSEWKRIFDQNRAIPPPNQTARLAQAQSQAFRLVLKRLDGLQLTQAEDVRPDRFELHVSL FDNNLHRFFGRTWKSKPHQATKRNQEQPSKVHFNEVVYFHTPLCLASVVAVVELVSFFPG TDTSQNAVGQGFGILQLFSGQAQGEGRLSLFHGTPRVLLHPTLRNPLQMNTVLSAIEGTQ LLYSLQPHPSLNSIMHLLPPNIMVSGHELIPGVLPPTDSSGDALQRPRSLPSFSCVLERV CVSLVPSIQAFETDLLEKLNNERNNTRMGAAMRSMVVQERRLHVGVHNGLGWVDGPQVMV LEPMAAASSDLKKSSTEKQSSVMMLRGKVELRMIKHPAFSLLFQLEYVFSVPLAGDGKMP SAAVQRVVFMQCVRWGVWSPFSDPEGPYESVCVNLQGGALPNPYGVLVYTAHTQQADTEK SVIKFKFTNNTESATSAATSKSVSQEKLHSKKWNMTSQDESRLGLEASPPHAACGPALTL SQLAVDSHYPTQNRTAGSPWQQQLPAPLALSPLAPAHQLSHVVNPAVGIAHLEVSAMERE RMRDAPEEECDLHELTFTPVHAPVITLGTHTTSSSRTSSRGFLAHLFSSRFPEIRDDLNQ VAELLDPDEPVNFDPHREEADQLQVNTLVLQFLAYSRVHQAGVNAEWPSMIHFTFQLYRF PPVTTQRLKLLASEADSRPNYPCILFVTNRDGSVGPGQPGLQLQYRVDPAFLKPGERVWF FRYLALHTLHIDVWDSDSLLLIGSAAVQLKHLLRQGRAAVQVIHELEVISTEYLQDASLG REHAGGQRAMSAMSVYTIVKGRLHIRLGNVGGVVQKTPNSSVLLPPSRSHVIQPSQTPTG FQGGSLSSNTILHLNARNARRAQRLPDIDGELASLLQSRLREVDGGRLQCGGETEEVRQR KIDRMAAVRQHEENTTSNTHQKASYMRRKEDRTQHSQDLRLIEAYRERCKVDGIINMLSQ AIITTHTIYAMLGTAEFFEFVLKNPFNIPQTVTIECEDTELSVIVNAEEWRYFKDLTKTY TPLEVEMFHMKEDSSTPQVYLRPKESVHIPLKYQSFVSGHALLSQDSKTSNSLYYAHHQQ SNTVMAKSIKVFFRAADSQPLAICQVRVEPTPHIVDQTFRFYQPELTFFKKAIRLPPAEP NTPDTCSRLQVRCSDPNVICNIIATDPGEPQDIYLKVPGAPSPQIKTFVITVFNDPWLAS PVQTWQVYMHYLQKMDISCVCGTLSWNSLVLRGTQSIRKVKCYTSHPLELQVDPDEVFAL PALGVQDIRLGVKALHSGSCFRYLNVVDVDTKQLVASWLLCLTCRQPVISRAFEIQVPVG GGRGSNKKIGFTNPYLSNRGFRLSSDHPDLLQFKEETFQIEGGAIYNIGLRFAPSQSAGT EEILVFINDLEDKNEETYCIKVVYR NT seq 4218 nt NT seq  +upstreamnt  +downstreamnt atgtcggagtggaaacgaattttcgatcaaaaccgagcgattcctcctcctaaccaaact gccaggctagcacaggcccagagccaggctttcagactcgtgctcaaaagactggacggg cttcaattgacccaggcagaggatgtgagaccagacagattcgagctacacgtctccctg tttgacaacaatctccatcgattctttggaaggacttggaaaagtaaaccacaccaggcc actaagcgaaatcaggaacaacccagcaaagtgcattttaatgaggttgtatacttccac acgcctctatgtttggcttcagtggtggctgtcgtggagctggtttccttctttcctggg acagacacttcccagaatgcagtgggacagggctttggcatcctgcagctcttctctgga caagcacagggagagggcaggttgagtctgtttcatggtactcctcgagtgttgcttcat ccaacactgagaaacccattgcaaatgaacactgtgttgtcagcgatagagggaactcag ctgctctattctctccaaccacacccttccctcaattccatcatgcacctcctgccaccc aatatcatggtctctggccacgagctcatccccggggtccttcctccaactgacagctca ggagacgctcttcagagacctcgatcgttgccgtcgttctcgtgtgtgctggaaagggtg tgtgtgtcccttgttccctccatacaggccttcgagacggacttgctggagaagctaaac aacgaacgcaacaacacgagaatgggtgcagcgatgcgctcgatggtggtgcaggagcga aggctgcacgttggtgtccataatggccttggctgggtggatggacctcaggtgatggtg cttgagccaatggctgccgcaagcagtgacctcaaaaagagttctactgagaagcaaagc tccgtcatgatgctccgtggtaaagtggagctgcgaatgataaagcacccagccttcagc cttctcttccagctggagtacgtcttctccgttcccctcgctggagacggaaagatgccc tcggcagccgtgcagagggtggtttttatgcagtgtgtgcgctggggtgtctggagtcct ttctctgatcctgaaggcccatatgaaagcgtatgtgttaacctgcagggtggtgcctta cccaacccctatggagttctggtttacacagcacacacacagcaggcggatacagaaaaa agtgttatcaaattcaagtttacaaacaacactgaaagcgccacgtccgctgcgacgtca aaatcggtctcccaggaaaagcttcattctaagaagtggaacatgacatcccaagatgaa agcaggcttggacttgaagcttcgccgccgcacgccgcatgtggtcccgcactcacgctc tctcagctggctgtggattcgcactacccgactcagaaccgcacggcagggtcgccatgg caacagcagcttcccgctccgcttgctctctccccgttggcgccggcccaccagctgtca cacgtcgtaaatcctgctgtaggcatagcacacctagaagtcagtgcgatggagagagag agaatgagggatgccccagaggaagagtgtgatctgcatgaactgaccttcacccctgtt catgctccagtcattacactaggaacacacacaaccagctctagcaggacgagttctcga ggattcctcgctcatctcttctcctcccgcttccctgaaatccgtgacgacctcaaccaa gtggctgagcttctcgaccctgatgagcctgtgaactttgacccccacagagaagaagca gatcaactgcaagtcaacacactcgtgcttcagtttttggcttattccagggtccatcag gcgggtgtgaatgcagaatggcctagcatgatacatttcacctttcagctgtaccgcttt ccgccggtcaccacacagcgcctcaagcttttggcatctgaggccgattcaagacccaat tacccctgcattctatttgtaactaacagggacggcagcgtcggaccggggcagcctggg ctgcagttgcagtaccgtgtcgatcctgcgttccttaaacctggcgagcgcgtatggttt ttccgctacctggcactccatactctgcacatcgacgtgtgggacagtgactctctactg ctcatcggctcagcagcagttcagctgaagcatctgttgcgtcagggtcgagctgctgtg caggtgattcatgagctggaggtcatcagcactgagtacctgcaggatgccagtctggga agagagcatgcaggtggacagagggccatgtctgccatgagcgtctacaccattgtcaaa ggcaggctgcatatccgactcggcaatgtcggtggcgtggtgcagaaaaccccgaactca tctgttcttctccctccgtctcgctctcatgtcattcagcccagccagactcccactggc tttcaaggaggcagtctgtcctcgaacaccatcctccacctcaacgcacggaatgcgagg cgggcccagcgtttgccagatattgatggcgagttggcaagtctcctacagagtcggctc agagaagtggatggtggccggctacagtgtggaggtgagacagaggaagtgcgacaaaga aagattgacaggatggcagctgttcgtcagcacgaagaaaacaccacatccaacacacac cagaaagccagctatatgaggagaaaagaggatcggactcagcactctcaagacctgcgt ttgatagaggcgtatcgtgagcgctgcaaagtggatggtatcattaacatgctgagccaa gccatcatcaccacgcacacaatctacgcgatgctcggcaccgctgaattcttcgaattt gtgcttaagaaccctttcaacattccccagacggtcaccattgagtgcgaagacaccgag cttagtgttatagtgaatgctgaggaatggcgatattttaaagacttgacgaagacgtac actccgttggaggtggagatgtttcacatgaaggaggacagctcgacacctcaggtgtac ttgcggcctaaagagagtgtccacatccctctgaagtaccaaagctttgtctctgggcat gccctgctttctcaggactcaaagacttctaacagcctgtattatgctcatcatcagcag tcgaacacagtgatggctaaatctatcaaggtgtttttccgggcagcggacagtcagccg ctggccatctgccaagtgagagtggagccgactccccacatagtcgaccagacctttcgc ttctatcagcctgagctcaccttttttaaaaaagccatccggctgcctcctgctgaaccc aacacaccagatacttgttccaggctccaggtgcgttgcagcgaccccaatgtaatctgc aacatcatcgccacggatccaggagaacctcaggacatttatctgaaagtgcctggggct cccagtccacagattaagacattcgtcatcaccgtgttcaatgatccctggttggcctct cctgttcaaacatggcaggtgtacatgcattacctgcagaaaatggacattagctgtgtg tgtggtacactcagctggaactcccttgtactacgtggcacacagagtatccgcaaagtc aagtgctacacttcccaccctctggagctacaggtggacccagacgaagtgttcgccctc cctgctctgggtgtgcaggacattaggcttggagtgaaagctctgcattccgggagctgc tttcggtaccttaacgtagtggatgtggacacaaagcagctggtggcatcctggctcctg tgcctcacttgcaggcagcctgttatatcacgggcctttgagatccaagtgcctgtaggg ggtggacgaggcagcaataagaagattggctttaccaatccatatctttccaacagagga ttcaggctgagctcggaccatccagacctactgcagttcaaagaggaaacgtttcagatt gagggaggtgcaatctacaacatcgggctgcgttttgctcccagtcagagcgctggtaca gaggagatcctcgtcttcattaacgacctggaggataagaacgaggagacgtactgcatc aaagttgtctacagataa

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