Silurus meridionalis (southern catfish): 124400267
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Entry
124400267 CDS
T08004
Symbol
mindy4
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase MINDY-4
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124400267 (mindy4)
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124400267 (mindy4)
Ubiquitin system [BR:
smeo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
124400267 (mindy4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
Motif
Other DBs
NCBI-GeneID:
124400267
NCBI-ProteinID:
XP_046727925
LinkDB
All DBs
Position
17:complement(24456044..24468376)
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AA seq
663 aa
AA seq
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MVKDVQEVAAAVVREYLSRKGLKKTIACMDEEFPRTNSSINNRSELCRVLHLESLYKKNK
CDEQPMKTMLEIMTKERMKKGGDVRRHPSQTDQSLEKDSSKPPSEPASAAPSIAYDDDDD
YYDDYDEEDVRKAKSFADEKRFSETSTVSKLSSSFPPQLEGNLNNMLPSAGLGLEQKSGG
VNVGERQASRGSRMRKGIMAGPVAASSQENTKRRPARKTSASPSLFSKKNEKVSAGMQWK
GSSNTDASRTKPEGSNTLERKDSENESTSPKLGALHMAGLVLDDFEDQDFSFGLSGINNV
SRHHDWNKHPMEQKTATALKEIIFGSPMSCFSEEWRCQNFTFSNRPTLRYGIVQKKGGPC
GVLAAVQATVLKKLLFEETSSDALSERLSSSVRTRCLTDAVAEILWRATDKKNVTVAINS
GRCHFTPIGHYRSDGILEMITCVEVQNFDDLKLLIEQHIHQFESGPFGCILLIVSAVLSR
TIPMVKGDMDVPTSTLIGAHGYCTQELVNLLLCGCAVSNVFDNEMKLDSGNGNFTLLKGI
RERCDIGLLSLYEHYNICTVGSYLKNPKFPIWMVCSESHFSILFSLCEDLTSGFRCPKEF
DLHYYDGLANQQEAIRLTVYPDSSVKALDAEEMDSDLTPPLELCIRTRWTDAAVSWNESE
PIL
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaagatgtgcaggaggttgcggctgctgtggtgcgggaatatctgagcagaaag
ggtctgaagaaaactattgcctgcatggatgaagagtttccacgaacaaactcgagcata
aacaaccgctcggagctgtgccgagtgctccacctagagagtctgtataagaagaataag
tgtgacgaacagccgatgaaaacaatgctggagatcatgacgaaagagcggatgaagaag
ggtggagacgtcagaaggcacccgagtcaaacagatcagagcttggagaaggactcatca
aaacctccttctgagcctgcctctgctgcacccagcattgcttacgatgatgatgatgat
tattatgatgattatgatgaggaggatgtaaggaaagcaaaaagctttgcagatgagaag
aggttttctgagacgagcaccgtgtccaagcttagttcctcatttccaccacagctggag
ggaaatctaaacaacatgttgccttcagcaggcctgggtttagagcagaagagtggaggt
gtgaatgtgggggagaggcaggcaagcaggggcagcagaatgaggaaaggcatcatggca
ggtcctgttgctgcttcgtctcaggaaaacaccaagagacgtcctgcaagaaaaacctca
gcgtctccgtctcttttttccaagaagaacgaaaaggtttcagctggaatgcagtggaag
ggcagcagcaacacagatgcttcacgcaccaaacctgaaggatctaacactcttgaacgg
aaagactcagaaaatgaatcaactagtccaaaactgggcgctcttcacatggcgggattg
gttctggatgattttgaagaccaggacttctcatttggactgtccggcattaataacgtc
tcacgccatcatgattggaataaacatcctatggagcagaaaacagctactgcgctgaag
gagatcatcttcggctcccccatgtcctgcttcagtgaggagtggagatgtcagaacttt
accttttccaacagacccacgcttagatacggcatcgtgcagaagaagggcggaccatgt
ggagttctcgctgccgttcaggccaccgttctcaagaaacttctgtttgaagaaacgagc
agtgacgcactttctgagagattgtccagcagcgtcaggacgaggtgcctgactgacgca
gtggctgaaatcctgtggagagcaacagacaagaaaaacgtcactgttgccataaactca
gggaggtgtcactttaccccaatcggccattacagatctgatggcattctggagatgatc
acctgtgtggaagttcagaactttgatgacttaaagctgctgattgaacagcacattcat
cagtttgagtcgggtccgttcggctgcatcttgctcatcgtctctgctgtcctgtccaga
acgattccgatggtgaaaggggacatggacgttccaacttctacactgattggtgctcac
ggctactgtacgcaggaactggtgaacctgctgctttgtgggtgtgcggtttcaaacgtt
tttgataatgaaatgaagctcgactctggtaacggaaatttcaccttgctgaaggggatc
agagagcgctgcgacatcggattgctgtctctgtacgagcattacaacatatgcacggtc
ggatcgtacctgaaaaacccaaagtttccgatctggatggtgtgcagtgagagtcacttc
agcatcctcttctcgctgtgtgaagatctgacgtctggcttcaggtgcccgaaagagttc
gacctgcattactacgacggattggccaaccagcaagaagccataagattaacagtgtat
ccagactcatctgtaaaagctctggatgctgaggaaatggattcggatctaacaccgccg
ctagagctctgcatcaggaccagatggacagatgcagctgtgagctggaatgaaagcgaa
cccattctttga
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