Silurus meridionalis (southern catfish): 124400313
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Entry
124400313 CDS
T08004
Symbol
stx2b
Name
(RefSeq) syntaxin-2 isoform X1
KO
K08486
syntaxin 1B/2/3
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
124400313 (stx2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124400313 (stx2b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124400313 (stx2b)
Membrane trafficking [BR:
smeo04131
]
SNARE
Syntaxin (Qa)
Stx-PM
124400313 (stx2b)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
124400313 (stx2b)
Exosomal proteins of other body fluids (saliva and urine)
124400313 (stx2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
DUF6262
GlfT2_domain3
Tlp
OmpH
DUF16
DUF3040
TMPIT
ApoLp-III
TRIQK
Neurensin
T2SSF
Lzipper-MIP1
EcoEI_R_C
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
124400313
NCBI-ProteinID:
XP_046727995
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Position
17:complement(2987801..2997973)
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AA seq
295 aa
AA seq
DB search
MRDRLAELKSGQHSEEEDGSVTVPVDRGGFMEGFFRKVEEVRSIIEKISSQVNEVKKKHS
MILSAPNPDERTKEELEQLMVEIKKNANVVRTKLKSMQQSLPPEDQASRPSVDERIQRTQ
YTVLSRKFVEVMTEYNDTQVSFRERSKCRIQRQLEITGKKTTSEELEDMLETGNPAIFTS
DIIMDSQITRQALNEIESRHRDIIRLESSIKELHEMFVDMAMLVETQGEMIDNIEKNVRN
AVDYVGKANEEVKKAVRYQNSARRKYIILALIVLVVAGVLVLIIGLSVGLSTKPA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgagggaccgtctggctgagctgaaatctgggcagcacagcgaagaggaggatggcagc
gtcacagttcctgtggatcgaggaggctttatggagggctttttcagaaaggtggaggag
gtcaggagcatcatcgaaaagatttcctcacaggtgaacgaggtgaagaagaagcacagc
atgatcctctccgctcccaaccccgatgaacggaccaaagaggagcttgagcagctgatg
gtggaaatcaagaaaaatgccaatgtggtacggaccaaacttaaatctatgcagcagagc
ttgcctcctgaagaccaagccagccgcccctcggtggacgagcgcatccagagaacacag
tacaccgtcttgtctcggaagtttgtggaagtcatgactgagtacaatgacacgcaggtc
tccttcagagagcgcagcaagtgcaggattcagagacaactggagattactggaaagaag
accaccagtgaggaactggaggatatgctggagactgggaaccccgctatttttacctcg
gatatcatcatggactcgcagatcaccagacaggcgctgaacgagatcgagtcgcggcat
agagacatcatacggctcgagtccagcatcaaagagctccacgagatgttcgtggacatg
gctatgctcgtagagacgcagggtgagatgatcgacaacatagagaaaaacgtaaggaac
gcagtggactatgtaggcaaagctaatgaggaggtgaagaaagctgtgaggtaccagaac
agcgcccgccggaaatatatcatcctggccctgatagtgctggtggtagccggtgttctc
gtgctaatcatcggtctttccgtgggcctgtcaactaaacctgcttaa
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