Silurus meridionalis (southern catfish): 124400323
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Entry
124400323 CDS
T08004
Symbol
cxxc1a
Name
(RefSeq) CXXC-type zinc finger protein 1a isoform X1
KO
K14960
COMPASS component SPP1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124400323 (cxxc1a)
03036 Chromosome and associated proteins [BR:
smeo03036
]
124400323 (cxxc1a)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
124400323 (cxxc1a)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
124400323 (cxxc1a)
COMPASS/SET1 complex (yeast)
124400323 (cxxc1a)
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Gene cluster
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
ASH2L-like_WH
Motif
Other DBs
NCBI-GeneID:
124400323
NCBI-ProteinID:
XP_046728010
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Position
17:26632711..26639856
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AA seq
564 aa
AA seq
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MDSETSEFDHHSGPEMSTNQDNAPVYCICRKPDINCFMIGCDNCNEWFHGDCINISEKMA
KSIRVWYCEKCRIKDEALEMKHRAKKSRERESDGDEMETEFDFKNDRRRGSRIKRSARMC
GECEPCLRTEDCAQCDFCKDMKKFGGPNKIRQKCRLRQCEVRARKMLRVKEEEMSMSKGQ
ERFQSDYPLSDEYSENELELYQQYCSGKYADHGWNSDEEDGAYLDPTMRKRAVKVKHVKR
REKRSEKKKEENKPRKHKPKQKHRDKVRHSEKTEARDSSEVRQCLGPGCVEAARLNSKYC
SDDCGMKLAANRIYEILPQRIQQWQQSPCIAEEQGKKLLERIRREQQLARTRLTDMEKRF
HELEGIIAKAKQQVVQHDEEVNEGDDDTDLQIFCVSCSHPVNPKVALRHMERCYSKYESQ
TSFGSMYPTRIEGATRLFCDVYNPQSKTYCKRLQVLCPEHSRDPKVPADEVCGCPLVRDV
FEPTGEYCRVSKRKCNKHYCWEKLRRAEVDLERVRVWYKLDELFEQERNMRIAMTNRAGL
LALMLHQTIQHDPHSTDLRASKDR
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggatagtgagacttcagagtttgaccaccattcaggacctgagatgagcacaaaccag
gacaacgctcccgtttactgcatctgtcgcaaaccagacatcaactgcttcatgatcggt
tgtgacaactgcaatgagtggtttcatggcgactgcattaatatatcggagaagatggca
aaatccattagggtgtggtactgtgagaaatgtcgcattaaggacgaggctttagagatg
aaacatcgcgccaagaaaagccgtgagcgagagtcagacggagacgagatggagacggag
ttcgattttaagaacgatcgccgccgagggtcgcggattaagcgctcggcgcgcatgtgc
ggggagtgcgagccttgcctgcgcaccgaggactgcgctcagtgtgatttctgcaaggac
atgaagaagttcggcggcccaaacaagatcaggcagaagtgccgactcaggcagtgtgaa
gtgcgcgccaggaaaatgctgcgggtgaaggaagaggagatgtccatgtctaaaggccaa
gaacgcttccagtccgactaccctctgtccgacgagtacagcgagaacgagctggagctc
taccagcagtactgctccgggaaatacgccgaccacggatggaacagcgacgaagaagac
ggagcgtacctcgatcccaccatgcgaaagagagccgtgaaggtcaagcacgtgaagagg
agagagaagcgatcggagaaaaagaaagaggagaataaaccccgtaaacacaagccgaag
cagaagcacagggacaaggtgagacacagcgagaagaccgaagctcgagacagcagtgaa
gtcagacagtgtctcgggccgggatgcgttgaagccgcacgtctcaactccaagtactgc
tccgatgactgcggcatgaagctcgccgccaaccggatctatgagatcctccctcagcgt
atccagcagtggcagcagagcccctgcatcgccgaggagcagggaaagaagcttctggaa
cgcatccggcgcgagcagcagctagcccggacacggctcacggatatggagaaacgtttc
catgagctggagggcatcatcgctaaggcaaagcagcaggtcgtgcaacacgacgaagag
gtgaacgaaggagacgacgacacggaccttcagattttctgcgtctcctgcagtcacccg
gtcaaccccaaggtggcgctacgtcacatggagagatgttattccaagtacgagagtcag
acatctttcggatcgatgtatcccacacgcatagaaggtgcaacgaggttgttctgcgat
gtatacaatcctcaaagcaaaacctactgcaaaaggcttcaggttctctgtcctgaacat
tcccgagatccaaaggtcccagcagatgaagtgtgcggatgtcctttggtgcgcgacgtc
ttcgagcccacgggggagtactgccgtgtgtcgaagcgcaaatgtaacaaacactactgt
tgggagaaactccgccgggccgaggtggacctggaaagagtccgagtgtggtacaagttg
gacgagttgtttgaacaggagcgtaacatgcggatagcaatgacgaaccgcgcgggtctc
ctggctctcatgcttcatcagaccattcaacacgacccacattcaacagacctgcgtgcc
agcaaggacagataa
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