Silurus meridionalis (southern catfish): 124400335
Help
Entry
124400335 CDS
T08004
Symbol
itga9
Name
(RefSeq) integrin alpha-9 isoform X1
KO
K06585
integrin alpha 9
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04510
Focal adhesion
smeo04512
ECM-receptor interaction
smeo04514
Cell adhesion molecules
smeo04810
Regulation of actin cytoskeleton
smeo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124400335 (itga9)
04514 Cell adhesion molecules
124400335 (itga9)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124400335 (itga9)
09142 Cell motility
04820 Cytoskeleton in muscle cells
124400335 (itga9)
04810 Regulation of actin cytoskeleton
124400335 (itga9)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smeo04515
]
124400335 (itga9)
Cell adhesion molecules [BR:
smeo04515
]
Integrins
Integrin alpha subunits
124400335 (itga9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
Integrin_A_Ig_2
Integrin_A_Ig_3
FG-GAP
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
124400335
NCBI-ProteinID:
XP_046728044
LinkDB
All DBs
Position
2:complement(34544242..34600496)
Genome browser
AA seq
1031 aa
AA seq
DB search
MMCTRAGQLWRSGMFDVLCACLLFSAVCGFNIDLEHALLFRGENQTFFGFSVLEHFHDNT
RWILVGAPRANSSYSKSVQSPGAVFKCRVHSNPKNRCTEIDLGRGGKDGESCGKTCQGDR
NDEWMGVSLARQNKPNGKVLACAHRWKNVYYKSEHILPHGYCSVIPSTLQGKAQPLIPCY
EDHKKMYGEEHGSCQAGIAGAFMEELVVMGAPGSYYWTGTVKVFNITSNTQYSLNKHQLS
SQRYSYLGYAVTAGHFSSTSAIDIAAGAPQDGGKGKVYVFKVDGVSLVKVFQASGTMMGS
YFGSSLCAVDLNADGFSDLLVGAPMFSEVRDEGQVSVYISRGNGVMEEAVVLNGKNSYNA
HFGECISALGDIDDDGYQDVAIGAPKEDDFGGVVYIYHGDPTGIVNKYSMRLSGRSFSPT
IQMFGQSISGSMDMDGNGYPDVTIGAFMADSVVLLRSKPVITVDVSIFLPASINITVPQC
HEGPQHLNCFKVTVCMRFRGKHVPGRIELLYNLTADAEKRYKGLSSRVYFTHGAEQSGTV
GHNFNLSINQQECDHHTAYVRKEVKDVFAAIVFETSYSLGRHVVDVRQENELAALTPVLR
WRKGEKIAARNETWFEKNCLSDDCAADLKLHGKLLLSGHHVRPHLALGGVKNVSLNITII
NSGDDAYDTNIYINFSREVHYINFLQREEKGISCELVQLDFLKCSVGFPFMRAQTKYHLS
VLFDTSHLSGENQTLLFLVHARSANPEHENTLHDNRLELFIPLVHEVDTAVTGLVTPSSF
VYGGSVDSSRFVQLEDFECNFQPLNFTFQVINNGPSRLPGSTVDMRIPNRLLGNGVDMFH
IIDTQVAEGKGNCTWTRNPTPCIIPQDRENIFYTIFAFFTKSGRKVLDCDRPGRACMTIS
CSLGSQAKDEAAVIDVRMLLNTETLKKDSSSVIQFVTRTHVRVHSQAVEVSGGLPEDISL
VFEALHSQEPRGYVVGWIIAISLLVGILIFLLLAVLLWKMGFFRRRYREIIEAEKNRNDS
DESWDWVQKSE
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcacgcgcgcggggcagttgtggagaagcgggatgtttgatgtcctgtgcgcg
tgcttgctgttttctgcggtctgtgggttcaacatcgacctggagcacgcgctgcttttc
cgcggagagaaccagacgttttttggcttctcggttctggagcatttccacgacaacaca
cgatggatcctggttggagctcctcgggcgaattcctcctacagtaaatcagttcagtct
cctggagccgtgtttaagtgccgtgttcacagcaacccgaagaaccggtgcacggagatc
gacctgggcagaggtggtaaagacggggagtcttgtggaaagacgtgccaaggggacagg
aatgatgagtggatgggagtcagtctggcgagacaaaacaaacccaacggaaaagttctg
gcctgtgcacatcgctggaaaaacgtgtactacaagtcagagcacatcctgccgcatggc
tactgctctgtgattccctcgacgttacagggcaaggcacagcctctcattccatgttac
gaagatcataagaagatgtatggagaagaacatggctcatgccaagcagggatcgcagga
gctttcatggaggagctggtggtgatgggagcaccaggatcatactactggactgggaca
gtgaaagtgttcaacatcacctccaatacacaatacagcctgaacaaacaccagctgagt
tctcaaagatacagttacttgggctatgcagtgacagcaggtcacttctcctcaacatct
gccatcgatattgctgctggagctcctcaggatggtggtaaaggaaaagtttacgtcttc
aaagtcgacggagtttctctcgtgaaggtctttcaagcttcagggacaatgatgggctct
tactttggctcctcactgtgtgcagttgacctgaacgcagacggattctcagacctgctg
gtcggggcaccgatgttcagtgaagttcgggatgaaggccaggtgtctgtttacatcagc
agaggcaacggagtgatggaggaagcagtcgttttgaatgggaaaaattcctacaacgct
cattttggagagtgtatcagtgccctcggggacatcgatgatgacgggtatcaagatgta
gcgattggagctcctaaagaagatgactttgggggtgtggtttatatctaccacggagat
cctacaggaatagtcaacaagtactcgatgaggttgtctggacgaagcttcagtccaacc
atccagatgttcggccagtcaatatccggcagcatggacatggatgggaacggatatcca
gatgtgacgatcggtgcgttcatggcagacagtgtggtgttattaaggtctaaaccggtc
atcacagtggacgtctcaatctttctgccggcctccataaacatcaccgtacctcagtgt
catgaaggtccacagcatctgaactgctttaaggtcactgtgtgtatgcgcttcagaggg
aaacatgttccggggcggatcgagctcctgtacaatctgacagcggacgcagaaaagcga
tacaaaggcctctcatcacgtgtctatttcacacatggtgcagaacagagcggaactgtg
ggtcataacttcaacctcagcatcaaccagcaggagtgtgatcaccacacggcctacgta
cggaaagaagtgaaggatgtgtttgcagccatcgtgttcgagacgtcctacagcctgggc
agacacgtagtggatgtgcgtcaggagaacgagcttgctgcactcactcctgtcctgcgc
tggagaaaaggagagaagattgcagcacggaatgagacctggtttgagaagaactgtctg
tccgatgactgcgctgctgacctgaagcttcacggcaaactgctgctttctgggcatcac
gtcagacctcatctcgctctcggtggcgtgaaaaacgtgtctctaaatataaccatcatc
aactccggagatgacgcttacgacaccaacatctacataaatttttccagggaggttcac
tacataaactttctgcagagggaggagaagggcatctcctgtgaactggttcagctggac
tttctcaaatgcagtgtgggatttcctttcatgagagcacagacgaagtatcatctttct
gttctgtttgacacgagtcacctgtcaggggaaaatcaaacactgctatttttggtacat
gccaggagcgcgaacccggaacatgagaacacgttacacgataacaggttggagcttttc
atcccgctggtacacgaagtggatacagctgttactggtttggttactccgtcctcgttc
gtgtatggaggttcagtcgactcgtctcgctttgttcagctggaggactttgagtgcaac
tttcagcctctcaacttcacctttcaggtgataaacaatgggccgagcagactcccgggc
tccaccgtggacatgaggattccaaacaggctgctaggaaatggagtcgacatgttccac
atcatagacacacaagtagctgagggcaaagggaactgcacatggaccagaaaccccacc
ccgtgtatcatcccccaggacagagagaatattttctacaccatcttcgcgttcttcacc
aagtctggcaggaaggtcttggactgtgaccggccaggaagagcctgtatgaccatttcc
tgtagtttaggatcccaagctaaagacgaagctgcggttattgatgtgcgaatgctactg
aacactgaaactcttaagaaagacagctcgtcggttattcagtttgtgacacgaactcat
gtccgagtgcacagccaggctgtagaggtgtctggtggccttccagaagacatttctctg
gtgtttgaggcgctgcacagtcaggagcccaggggttatgtggtgggctggatcattgcc
atcagtctgctggtggggatcctcatcttcctcctgctggcggtgctgctctggaagatg
gggtttttccggcggcgttaccgggagataatcgaggcagaaaagaacaggaacgacagt
gatgaaagctgggattgggttcagaagagtgaataa
DBGET
integrated database retrieval system