KEGG   Silurus meridionalis (southern catfish): 124400335
Entry
124400335         CDS       T08004                                 
Symbol
itga9
Name
(RefSeq) integrin alpha-9 isoform X1
  KO
K06585  integrin alpha 9
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo04510  Focal adhesion
smeo04512  ECM-receptor interaction
smeo04514  Cell adhesion molecules
smeo04810  Regulation of actin cytoskeleton
smeo04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    124400335 (itga9)
   04514 Cell adhesion molecules
    124400335 (itga9)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    124400335 (itga9)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    124400335 (itga9)
   04810 Regulation of actin cytoskeleton
    124400335 (itga9)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:smeo04515]
    124400335 (itga9)
Cell adhesion molecules [BR:smeo04515]
 Integrins
  Integrin alpha subunits
   124400335 (itga9)
SSDB
Motif
Pfam: Integrin_A_Ig_1 Integrin_A_Ig_2 Integrin_A_Ig_3 FG-GAP FG-GAP_3 Integrin_alpha
Other DBs
NCBI-GeneID: 124400335
NCBI-ProteinID: XP_046728044
LinkDB
Position
2:complement(34544242..34600496)
AA seq 1031 aa
MMCTRAGQLWRSGMFDVLCACLLFSAVCGFNIDLEHALLFRGENQTFFGFSVLEHFHDNT
RWILVGAPRANSSYSKSVQSPGAVFKCRVHSNPKNRCTEIDLGRGGKDGESCGKTCQGDR
NDEWMGVSLARQNKPNGKVLACAHRWKNVYYKSEHILPHGYCSVIPSTLQGKAQPLIPCY
EDHKKMYGEEHGSCQAGIAGAFMEELVVMGAPGSYYWTGTVKVFNITSNTQYSLNKHQLS
SQRYSYLGYAVTAGHFSSTSAIDIAAGAPQDGGKGKVYVFKVDGVSLVKVFQASGTMMGS
YFGSSLCAVDLNADGFSDLLVGAPMFSEVRDEGQVSVYISRGNGVMEEAVVLNGKNSYNA
HFGECISALGDIDDDGYQDVAIGAPKEDDFGGVVYIYHGDPTGIVNKYSMRLSGRSFSPT
IQMFGQSISGSMDMDGNGYPDVTIGAFMADSVVLLRSKPVITVDVSIFLPASINITVPQC
HEGPQHLNCFKVTVCMRFRGKHVPGRIELLYNLTADAEKRYKGLSSRVYFTHGAEQSGTV
GHNFNLSINQQECDHHTAYVRKEVKDVFAAIVFETSYSLGRHVVDVRQENELAALTPVLR
WRKGEKIAARNETWFEKNCLSDDCAADLKLHGKLLLSGHHVRPHLALGGVKNVSLNITII
NSGDDAYDTNIYINFSREVHYINFLQREEKGISCELVQLDFLKCSVGFPFMRAQTKYHLS
VLFDTSHLSGENQTLLFLVHARSANPEHENTLHDNRLELFIPLVHEVDTAVTGLVTPSSF
VYGGSVDSSRFVQLEDFECNFQPLNFTFQVINNGPSRLPGSTVDMRIPNRLLGNGVDMFH
IIDTQVAEGKGNCTWTRNPTPCIIPQDRENIFYTIFAFFTKSGRKVLDCDRPGRACMTIS
CSLGSQAKDEAAVIDVRMLLNTETLKKDSSSVIQFVTRTHVRVHSQAVEVSGGLPEDISL
VFEALHSQEPRGYVVGWIIAISLLVGILIFLLLAVLLWKMGFFRRRYREIIEAEKNRNDS
DESWDWVQKSE
NT seq 3096 nt   +upstreamnt  +downstreamnt
atgatgtgcacgcgcgcggggcagttgtggagaagcgggatgtttgatgtcctgtgcgcg
tgcttgctgttttctgcggtctgtgggttcaacatcgacctggagcacgcgctgcttttc
cgcggagagaaccagacgttttttggcttctcggttctggagcatttccacgacaacaca
cgatggatcctggttggagctcctcgggcgaattcctcctacagtaaatcagttcagtct
cctggagccgtgtttaagtgccgtgttcacagcaacccgaagaaccggtgcacggagatc
gacctgggcagaggtggtaaagacggggagtcttgtggaaagacgtgccaaggggacagg
aatgatgagtggatgggagtcagtctggcgagacaaaacaaacccaacggaaaagttctg
gcctgtgcacatcgctggaaaaacgtgtactacaagtcagagcacatcctgccgcatggc
tactgctctgtgattccctcgacgttacagggcaaggcacagcctctcattccatgttac
gaagatcataagaagatgtatggagaagaacatggctcatgccaagcagggatcgcagga
gctttcatggaggagctggtggtgatgggagcaccaggatcatactactggactgggaca
gtgaaagtgttcaacatcacctccaatacacaatacagcctgaacaaacaccagctgagt
tctcaaagatacagttacttgggctatgcagtgacagcaggtcacttctcctcaacatct
gccatcgatattgctgctggagctcctcaggatggtggtaaaggaaaagtttacgtcttc
aaagtcgacggagtttctctcgtgaaggtctttcaagcttcagggacaatgatgggctct
tactttggctcctcactgtgtgcagttgacctgaacgcagacggattctcagacctgctg
gtcggggcaccgatgttcagtgaagttcgggatgaaggccaggtgtctgtttacatcagc
agaggcaacggagtgatggaggaagcagtcgttttgaatgggaaaaattcctacaacgct
cattttggagagtgtatcagtgccctcggggacatcgatgatgacgggtatcaagatgta
gcgattggagctcctaaagaagatgactttgggggtgtggtttatatctaccacggagat
cctacaggaatagtcaacaagtactcgatgaggttgtctggacgaagcttcagtccaacc
atccagatgttcggccagtcaatatccggcagcatggacatggatgggaacggatatcca
gatgtgacgatcggtgcgttcatggcagacagtgtggtgttattaaggtctaaaccggtc
atcacagtggacgtctcaatctttctgccggcctccataaacatcaccgtacctcagtgt
catgaaggtccacagcatctgaactgctttaaggtcactgtgtgtatgcgcttcagaggg
aaacatgttccggggcggatcgagctcctgtacaatctgacagcggacgcagaaaagcga
tacaaaggcctctcatcacgtgtctatttcacacatggtgcagaacagagcggaactgtg
ggtcataacttcaacctcagcatcaaccagcaggagtgtgatcaccacacggcctacgta
cggaaagaagtgaaggatgtgtttgcagccatcgtgttcgagacgtcctacagcctgggc
agacacgtagtggatgtgcgtcaggagaacgagcttgctgcactcactcctgtcctgcgc
tggagaaaaggagagaagattgcagcacggaatgagacctggtttgagaagaactgtctg
tccgatgactgcgctgctgacctgaagcttcacggcaaactgctgctttctgggcatcac
gtcagacctcatctcgctctcggtggcgtgaaaaacgtgtctctaaatataaccatcatc
aactccggagatgacgcttacgacaccaacatctacataaatttttccagggaggttcac
tacataaactttctgcagagggaggagaagggcatctcctgtgaactggttcagctggac
tttctcaaatgcagtgtgggatttcctttcatgagagcacagacgaagtatcatctttct
gttctgtttgacacgagtcacctgtcaggggaaaatcaaacactgctatttttggtacat
gccaggagcgcgaacccggaacatgagaacacgttacacgataacaggttggagcttttc
atcccgctggtacacgaagtggatacagctgttactggtttggttactccgtcctcgttc
gtgtatggaggttcagtcgactcgtctcgctttgttcagctggaggactttgagtgcaac
tttcagcctctcaacttcacctttcaggtgataaacaatgggccgagcagactcccgggc
tccaccgtggacatgaggattccaaacaggctgctaggaaatggagtcgacatgttccac
atcatagacacacaagtagctgagggcaaagggaactgcacatggaccagaaaccccacc
ccgtgtatcatcccccaggacagagagaatattttctacaccatcttcgcgttcttcacc
aagtctggcaggaaggtcttggactgtgaccggccaggaagagcctgtatgaccatttcc
tgtagtttaggatcccaagctaaagacgaagctgcggttattgatgtgcgaatgctactg
aacactgaaactcttaagaaagacagctcgtcggttattcagtttgtgacacgaactcat
gtccgagtgcacagccaggctgtagaggtgtctggtggccttccagaagacatttctctg
gtgtttgaggcgctgcacagtcaggagcccaggggttatgtggtgggctggatcattgcc
atcagtctgctggtggggatcctcatcttcctcctgctggcggtgctgctctggaagatg
gggtttttccggcggcgttaccgggagataatcgaggcagaaaagaacaggaacgacagt
gatgaaagctgggattgggttcagaagagtgaataa

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