Silurus meridionalis (southern catfish): 124400358
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Entry
124400358 CDS
T08004
Symbol
rhocb
Name
(RefSeq) rho-related GTP-binding protein RhoA-D
KO
K04513
Ras homolog gene family, member A
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04081
Hormone signaling
smeo04144
Endocytosis
smeo04150
mTOR signaling pathway
smeo04270
Vascular smooth muscle contraction
smeo04310
Wnt signaling pathway
smeo04350
TGF-beta signaling pathway
smeo04510
Focal adhesion
smeo04520
Adherens junction
smeo04530
Tight junction
smeo04621
NOD-like receptor signaling pathway
smeo04625
C-type lectin receptor signaling pathway
smeo04810
Regulation of actin cytoskeleton
smeo05100
Bacterial invasion of epithelial cells
smeo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
124400358 (rhocb)
04350 TGF-beta signaling pathway
124400358 (rhocb)
04150 mTOR signaling pathway
124400358 (rhocb)
09133 Signaling molecules and interaction
04081 Hormone signaling
124400358 (rhocb)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124400358 (rhocb)
09144 Cellular community - eukaryotes
04510 Focal adhesion
124400358 (rhocb)
04520 Adherens junction
124400358 (rhocb)
04530 Tight junction
124400358 (rhocb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
124400358 (rhocb)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
124400358 (rhocb)
04625 C-type lectin receptor signaling pathway
124400358 (rhocb)
09153 Circulatory system
04270 Vascular smooth muscle contraction
124400358 (rhocb)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
124400358 (rhocb)
05100 Bacterial invasion of epithelial cells
124400358 (rhocb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124400358 (rhocb)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124400358 (rhocb)
04031 GTP-binding proteins [BR:
smeo04031
]
124400358 (rhocb)
Membrane trafficking [BR:
smeo04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
124400358 (rhocb)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124400358 (rhocb)
Exosomal proteins of other body fluids (saliva and urine)
124400358 (rhocb)
Exosomal proteins of colorectal cancer cells
124400358 (rhocb)
Exosomal proteins of bladder cancer cells
124400358 (rhocb)
GTP-binding proteins [BR:
smeo04031
]
Small (monomeric) G-proteins
Rho Family
RhoA/B/C [OT]
124400358 (rhocb)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
SRPRB
VASP_tetra
Motif
Other DBs
NCBI-GeneID:
124400358
NCBI-ProteinID:
XP_046728092
LinkDB
All DBs
Position
17:19397081..19429851
Genome browser
AA seq
193 aa
AA seq
DB search
MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDT
AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD
LRNDEHTRRELAKMKQEPVKPEEGRDMANRISAFGYLECSAKTKEGVREVFEMATRAALQ
VRKRKKRSGCLLL
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atggcagccatccgcaagaagctggtgatagtaggagatggagcatgtggaaagacatgt
ctactcattgttttcagtaaagatcagttccctgaggtctacgtgcctactgtatttgag
aactacatcgctgacatcgaagtggacggcaaacaggttgagctggctttatgggacact
gcaggacaggaggactatgacaggttgaggccgctgtcctatccagacacagatgtcatc
ctcatgtgcttctccatagacagtcctgacagtttagagaacattccggagaagtggaca
ccagaggtgaagcatttctgtcctaatgttcctatcatcctggtgggaaacaagaaagac
ctgcgcaatgatgagcacactcgcagagagctggccaagatgaagcaggagccagtaaag
ccagaggaaggcagagacatggctaacaggatcagcgcattcggttatctggagtgttct
gctaaaactaaagagggtgtgcgggaggtgtttgagatggccaccagggcagcactgcag
gtccgcaagcgcaagaagagaagcggctgcctgctcttatga
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