Silurus meridionalis (southern catfish): 124400371
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Entry
124400371 CDS
T08004
Symbol
si:dkey-28n18.9
Name
(RefSeq) sorting nexin-6 isoform X1
KO
K17920
sorting nexin-5/6/32
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124400371 (si:dkey-28n18.9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124400371 (si:dkey-28n18.9)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
124400371 (si:dkey-28n18.9)
Membrane trafficking [BR:
smeo04131
]
Endocytosis
Macropinocytosis
Sorting nexins
124400371 (si:dkey-28n18.9)
Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
124400371 (si:dkey-28n18.9)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
Ground-like
Motif
Other DBs
NCBI-GeneID:
124400371
NCBI-ProteinID:
XP_046728151
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All DBs
Position
1:31803057..31824351
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AA seq
368 aa
AA seq
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MMDESAAKVNANSIVIADVTQDGDTLTFAVTSQKLSSRNGICVFRTYDDFEWLQQSLFSQ
DDVEGLYGVIFPPLPAKPLPPSSHTQTKALKQLGFLALGNNWQLYCRALEFYLQQVAAHS
ILGKSKLLHSFLSSTESSSKQRSKKGIFDRLSHAMEEMRKEGHKDVDEFFHNERESNMHL
TALFKATTEKFLEVVLTKQRLALACGHFSTSLHLCVTQDNPSAMAFSKICVKLSDIMDAV
KRNLDNVSENDVCTLGLGLDFESRYQEAKKEMLFRRTCKLVELENIIKTAEKAKSNKKAI
MDGVQKVTQKEFNLISSVAKEEIDWYHKTRVSVLRGFLTHWCEKQLDTAKESAALFSQLL
EAWKGFPL
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgaatctgcggcgaaggtgaacgctaacagcatcgtgatcgctgatgtgacg
caggacggagacacgctgaccttcgccgtcacgtcccagaagctgagcagcaggaacggg
atctgcgtcttcaggacgtatgatgactttgagtggctgcagcagagcctattctctcag
gacgacgtggagggactctacggcgtgatatttcctcctctgccagccaaacctctgcct
cccagctcacacactcagactaaagcactaaagcagctgggcttcttggctctgggcaat
aactggcagctctactgtagggctttagagttctacctgcagcaggtggcagcacacagc
atcctgggaaagagcaaactgcttcacagcttcctcagcagcacagagtcgtctagtaaa
caacgcagcaaaaagggcatcttcgaccgcctcagtcatgccatggaggaaatgaggaag
gaaggtcacaaggatgtggacgagttttttcacaatgagagagaaagcaacatgcacttg
actgcattgtttaaagctacaacagagaaattcctggaggttgtgctgacgaagcagagg
cttgctttggcatgtggccatttctccacttcgttacatctctgtgtaactcaggacaat
ccatctgccatggccttctccaagatttgtgtgaagctgtctgatataatggatgcagtg
aaaaggaatctcgacaatgtgtcggagaacgacgtgtgcaccctgggcttgggtttggat
ttcgagtctcgctaccaggaggcaaagaaagagatgttgttcaggagaacttgtaaacta
gtggaactggagaacattattaagactgcagaaaaagccaaatccaacaagaaagcaatc
atggatggagttcaaaaagtgacacagaaggagtttaatctcatctcgtcggtggcaaag
gaggagattgactggtaccataaaacacgtgtgagtgttttgcgtggctttctgacccac
tggtgtgaaaagcagttggacacggccaaggaatccgccgctctcttctctcagctcctg
gaggcttggaaaggatttcctctttaa
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