Silurus meridionalis (southern catfish): 124400375
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Entry
124400375 CDS
T08004
Symbol
rab11fip5a
Name
(RefSeq) uncharacterized protein rab11fip5a isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124400375 (rab11fip5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124400375 (rab11fip5a)
Membrane trafficking [BR:
smeo04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
124400375 (rab11fip5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
DUF4635
Motif
Other DBs
NCBI-GeneID:
124400375
NCBI-ProteinID:
XP_046728121
LinkDB
All DBs
Position
2:20654424..20678949
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AA seq
1474 aa
AA seq
DB search
MASVNRDEEQRWVPTHVQVLVIRARGLRAKGKHGTSDAYAVVQLGKEKYSTCVMEKTTEP
EWGEECSFELQPGVLEEGGRDALPAGTCDLTFTVMHRALIGLDVFLGQSVIAVDKVFRER
ACMRNEWYKLNSKTGKKEKERGELQLTVQFTRHNLTASMYDLSLKDKPRSAFIRLRERMR
ARKHGGDEESSSAVVPGGYGTLTRTRSRLPSDGGGEEDYEDDEGGELRRSKMRSYFLHGR
LRKSSDTRSSTSLGSESSESSSRGGSLSPTAGISVVVSDLSNSPSNSSNLTADNSPEHTV
APSPLVSPVKSVFDEVCDLSISVPHSLTTDIDAPILLPSVCVNGNPVETSPLTHQPPSLV
LQQPRLQIETQQESQQTPQSSPPEKSKSTQAQTAQHSEIKPQSSLEFQIQQPKVESKSKP
DVQFPALGLLQKGSALSLSLQNLSRHKEKQQGGGPVDGRRWSFDKPGEEEKAAIAAALEH
AGLIADEPVIEKVASVSERDVQGKKKRSLFSHARGEKEESGPVQPAAEGRHRGWFSSKDP
YSKPSSSIYQPEVPASRPRSHTPPLHLDEAGNAKGALMDGSSDNLTSSFCRTNVSGDSYK
YTQWDDFIDGRLKLNSKINSQMLNVLPSCSIEPTNPTPTCAEGDLQSHVEAEAKFVRCSM
QKVDLCEFVSRDALESEIDSSLPQNSSIEFSELNALACPYPTLPEFTINNDKFSAVSFFQ
KNTSNAMPVSSVTLEPSAPNSESPGYLARGEKSEDKTRKSMSSERQTDDDDAKGSVEIQN
TSLFYSNFDILEELSIVAPESSSRSCNVPKCLPKEQKNFESEGDLGTGDGDLELVASPIK
ERTCLDVIPATYTLGLSIPLGPSASVLQGKLTIEKDPTGNPVCEPLNKSEVNFEEEGFYR
KNLNVLMDSASTNSSNMSLERDKCSDSSSNLSKGFFKNNSLPETTVLKHCEVETPKGNRN
ILSSPLSPKNVLSDSLYKSVDSEQYLTCMSQHTSLAVSQLSPVATLENYTFQEANLKSGL
TQDILTTNDFSQRIILKLQQDPAEISQKASPKMLKFTKCVASQNTLEKEVIMDTVANGSI
QKYNPPMDSVMKQDLLHESMPDVLDMMPKAGENLLMLDSHMYRDDISSALPHRFHQVQCS
DALEDLELITDFCQSPENMCNSDFAFKPNSSIIHDLVKTDLPLENVFVAQHAVTHSVGTS
PVAYPAPRETFTNMELCLEVSQRIKNAQETSTTAFVSQGEYLDIDVNWSTSQPPPPEPAV
VGRQTSGHDQLMSSPLSLLDLSPLAASTPHVAEEITSMPLFPFPVPSVTAKLQHTALATD
AFPTLLAASHNSFPQKEHQVDGHLSSPHLVKPLTPPDEKRSEGRSVLEKLKSTIHPGRSH
QGDQEPDKKLLVEGGGSYYHLNHSELVSLLLQRDAELQHEREEYERSGLLLEKREMEIKK
MKVLIKDLEDYIDTLLVRIMEQTPALLQVRSKIK
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggtaaacagggacgaggagcagcgatgggtgccgacgcacgtgcaggtactg
gtgatccgcgcccgcgggctccgcgccaagggcaagcacggcaccagcgacgcttacgcc
gtggtgcaactcggcaaggagaagtactcgacgtgtgtgatggagaaaaccacggagccc
gagtggggcgaggagtgctcgttcgagctgcagcctggcgtcctggaggaagggggccga
gacgcgctcccggcgggcacctgcgacctcaccttcacggtcatgcaccgcgcgctcatc
ggcctggatgtgttcctcggccagagcgtgatcgcggtggacaaggtgttccgtgagcgc
gcatgcatgagaaacgagtggtacaagcttaattctaaaactggcaaaaaggagaaagaa
agaggggagcttcagctaactgtgcagttcactcgccataatctgacagccagcatgtat
gacctctctttgaaggacaaacctcggtcagccttcatcaggctgcgtgagcgcatgcgt
gcccggaagcatggtggggatgaagagtcttcctcggccgtcgtgcctgggggttacggg
acgttaacgcgcacgcgaagccgtctgccaagtgatggtggtggtgaagaagactatgag
gatgatgaaggaggggagttgagaaggagtaaaatgaggagttattttctccatggacgg
ttacgcaagtcttctgacacgcgctctagcacgtctttaggttcggaaagcagcgagtcg
tcttctagggggggcagcctaagtccaactgctggcatcagtgtagtggtctctgacctc
tccaattcgccaagtaacagcagcaacctgactgcagacaacagcccagagcacacagta
gctccctcaccactagtctcacctgtcaaaagtgtgtttgatgaggtgtgtgaccttagc
atctcagtgcctcattccttgaccactgacattgatgcccccattctcctgccctctgta
tgtgttaatggaaatccagtggaaacctctcctctaactcaccaacccccctcactggta
ctacaacagccaaggctacagatagagacccaacaagaatcacagcaaactcctcagtca
agcccaccagagaaaagcaaatctactcaggcccaaacagcccagcactcagaaatcaaa
cctcaatccagtttagagtttcagattcagcagcctaaagtggaatctaaatctaagcct
gacgtgcagttccctgcattagggctgctgcagaaggggtctgcactctctctgtcgttg
cagaacctctctcggcataaagagaaacagcagggcggcgggcctgtagatggccgtcgc
tggtcttttgacaaaccaggagaggaggagaaggcggccattgctgctgcactggagcat
gctgggctgattgccgatgaaccagtgattgagaaggttgcgtctgtaagtgagagagat
gttcagggcaagaagaagcgaagcttgttctctcatgcacgaggagaaaaagaggaaagt
ggtcctgttcagccagctgcagagggaagacacagaggctggttcagctctaaggaccca
tacagtaaaccaagctcatccatctatcaacctgaagtgcctgcatccagaccaagaagc
cacacccctcctttacacttagatgaagctggaaatgcaaaaggagccctaatggatgga
tcatcagataatctaaccagttctttttgcagaactaatgtgtctggtgactcttacaaa
tatactcagtgggatgatttcattgatggtcgactaaagctaaactcgaagattaatagt
cagatgttgaatgtgcttccttcttgctcaattgaaccaacaaatccaactcccacttgt
gctgaaggtgaccttcaatctcatgttgaagctgaagctaaatttgtacgctgtagtatg
cagaaggttgatctctgcgagtttgtttctcgggatgctttagaatccgaaattgactcc
tcattgcctcaaaactcaagcatagagttctctgaactcaatgctttagcatgcccttac
cctacacttccagaatttacaattaataatgataaattcagcgcagtctcatttttccaa
aagaatacatcaaatgcaatgcctgtgtcatctgtgacacttgaaccctcagcacccaat
tctgaatcacctggatatttagcccggggtgaaaagtctgaagacaaaactagaaaatct
atgtcttctgagaggcaaacggatgatgatgacgctaaagggtctgttgaaatccagaat
acatctctgttttacagtaattttgatattctggaagaactttccattgtggcacctgaa
tcttcaagcaggagttgtaatgtcccaaagtgcctaccaaaagaacagaagaactttgaa
tcggaaggtgatcttggaacaggagatggagatttggaattggtggcgtctcctattaaa
gaaagaacatgcttggatgtcattccagcaacatatacattagggttgtctattccctta
ggacccagtgcgtctgtgttgcaaggaaaactgaccatagaaaaagatcctacaggtaat
ccagtgtgtgaaccactgaacaaaagtgaagttaattttgaagaggaaggtttttatcgc
aagaacttgaatgttcttatggattctgcttctactaactcaagcaacatgtcacttgaa
agggataaatgcagtgattcatctagtaatctatcgaagggatttttcaagaataacagt
ttacctgaaactactgtcctaaaacactgtgaggtggagacaccaaaaggtaacagaaac
atactatcttcaccactgtctcccaagaatgtgctctctgatagcctgtataagagtgta
gattcggagcaatacctaacatgtatgtcacagcatacttctcttgctgtatctcaactc
tctccagtggccactctggaaaattacacatttcaagaagccaacctaaaatccggttta
acccaggacattttgacaacaaatgacttctctcaaaggatcatattgaaactgcagcaa
gacccagctgagatttcccaaaaagcttcaccaaaaatgttgaaatttacaaaatgtgtt
gcttcccagaacactttagaaaaagaggtcataatggatactgttgcaaatggatcaata
caaaaatacaatcccccaatggactctgttatgaaacaagatttgctacatgaaagtatg
cctgatgtcttagacatgatgccaaaagcaggggaaaatcttttaatgttagattctcat
atgtatagggatgatatttcctcagctctgcctcatcggtttcaccaagtgcaatgttct
gatgctttagaggacctggagcttatcacagatttttgtcagtcacctgaaaatatgtgc
aattctgattttgcattcaagccaaactctagcattattcacgacttggttaaaacagat
ttgcccctggagaatgtgtttgtggcccaacatgctgtgacacattctgttggcacaagc
cctgtcgcatatcctgcacctagggagactttcacaaacatggaattgtgtcttgaagta
tcacaacgaattaaaaatgcacaagaaacaagtacaacagcttttgtttctcaaggggag
tatttggacattgatgtaaactggtctactagtcaaccaccaccccctgaacccgcagtg
gtgggcaggcaaacttcagggcatgatcaattgatgagctctccattatctttgcttgac
ctctcaccacttgctgcatctacaccgcatgtggccgaagagattactagtatgccattg
ttcccctttcctgtgccctctgtcacagcaaaattgcagcatactgcactggctactgac
gcttttccaactttgcttgctgcatcacataattcttttcctcagaaagaacatcaggta
gacggtcatctaagcagtccacatctagtgaagcctttgacacctccagatgagaagaga
tcagaaggacggtctgtgctggagaagctcaagtccaccattcatccaggtcgaagtcat
caaggagaccaggaacctgacaagaagctcttggtggaaggtggaggctcctactaccat
ctgaaccacagtgaactggtgtcactcctgctacaaagggatgcagagctccaacatgag
agggaagagtatgagcgcagtggccttctgctagagaagcgggagatggagataaagaag
atgaaagttttaatcaaagatctagaggattatattgacactctgctagtccgcattatg
gaacaaacacctgcactgttgcaagtccgttccaaaataaaatga
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