Silurus meridionalis (southern catfish): 124400395
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Entry
124400395 CDS
T08004
Symbol
tbc1d9
Name
(RefSeq) TBC1 domain family member 9
KO
K19951
TBC1 domain family member 8/9
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124400395 (tbc1d9)
Membrane trafficking [BR:
smeo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
124400395 (tbc1d9)
Endosome - Golgi transport
Rab GTPases and associated proteins
124400395 (tbc1d9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
CP2
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
124400395
NCBI-ProteinID:
XP_046728160
LinkDB
All DBs
Position
2:7202790..7244618
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AA seq
1252 aa
AA seq
DB search
MWIHPEEVLMAGALWVTERANPYFILQKRKGHGEGGGGLAGLLVGTLDVMLDSSARVAPY
RILYQTPDSLVYWTIAHGSSRREITEHWEWLEHNLLQTLSIFENENDITTFVKGKIQGII
AEYNKNHDNKEDDDTEKFKEATAKFRRLFGMPDEEKLVNYYSCSYWKGRVPRQGCLYLSI
NHLCFYSYLLGKEAKLLVRWADITQLEKNATLLLPDMVRVSTRCSEHVFSVFLNINETFK
LMEQLANIAMRQLLDNKGFEQDRSLPKLKRKSPKKVSALKRDLDARAKSERYRTLFRLPK
DEKLDGHTDCTLWTPFNKMHILGQMFVSTNYICFTSKEETVCSLIIPLREVTIVEKADSS
NVLPSPLSISTKNRMTFLFANLKDRDFLVQRISDFLQQTSSKIYFEREITGSLTSSDDEV
YSQHSSLLSCSPQRSSLGSEGESERQFNLNDNSVPTATQALMTMYRRRSPEEFNPKLAKE
FLKEQAWKNHFAEFGQGVCMYRTEKTKELVLKGIPENMRGDLWLLFSGAINEMATHPGYY
EDLVEKSMGKYNLATEEIERDLHRSLPEHPAFQNEMGIAALRRVLTAYAFRNPNIGYCQA
MNIVTSVLLLYAKEEEAFWLLVALCERMLPDYYNTRVVGALVDQGVFEELARVHVPQLYD
CMQELGVISTISLSWFLTLFLSVMPFESAVVVVDCFFYEGIKLIFQLALSVLDANIYQLL
NCKDDGEAMTVLGRYLDSVTNKDSTLPPIPHLHSLLTDDGEPHPEVDIFKLVRSSYEKFG
SIRADVIEQMRFKQRLRVIQTIEDTTKRNVVRTIVTETAFGIDELEELFSLFKAEHLTSC
YWGGTSNPMDRHDPSLPYLEQYRMDLEQFKGLFSVLFSWASGTHTDGLAVRFFRLLDQNA
DALINFREFINGLGVLCHGDLTEKLKLLYKMHILPDVHHEQDEPDSAFEATQYFFEDITP
ETSNGLVHKSRSEKDDGFVRVTFKNEKVKKMQTADYRMYLRLWNQETKSKTENMKDLPKL
NQGQFIELCKTLYNMFSEDANEQELYHATATVTSLLLEMGEVGKLFCSPSSKEDDADDEE
EDEDEEHATARNRKQQRIQKQTFIRSVDDKIPSAAPMEDIKLDESPKDTGASTAMLVSDD
ETKDDTSVSSYSVLSTGSHEMDEKLQCEDIAEDTVLVRSGAGGNGIPHSTSIDKDWAITF
EQFLASVLTEQALVHYFEKPVDIVDRIANAKNVRKGGQTHTSVSDYEISLSG
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgtggatccacccggaggaggtgttgatggccggtgcgctttgggtcaccgagcgcgca
aacccctatttcatcctgcagaagagaaaaggacatggagaaggaggaggaggactagct
ggtttgctagtggggactctggacgtcatgctggactccagtgcacgcgtggctccgtac
aggatcctttatcagacccctgactcgctggtatactggaccattgctcacggaagctcc
cgtagagagattactgaacactgggagtggctagaacacaacctccttcagacgctgtct
atatttgagaatgagaatgacatcactacttttgtcaagggcaagattcagggcatcatt
gccgaatacaacaaaaatcatgacaataaggaagacgacgacacggagaagtttaaggaa
gccacggctaagtttcggaggttgttcgggatgccggacgaggagaagctggtaaactat
tactcctgcagctactggaaaggccgagttcccaggcagggctgtctctacctcagcatc
aaccatctctgcttctattcttatctgctgggcaaggaagccaagctgttggttcgctgg
gctgatatcactcagctggagaagaacgccaccctgctgctgccagacatggtgcgagtg
agcacccgctgcagcgaacatgtcttctctgtctttcttaacatcaacgagaccttcaag
ctcatggagcagctggccaacatcgccatgcgccagcttctggacaacaagggtttcgag
caggatcgctcactgcccaaactcaagagaaagtcacctaagaaagtgtcggccctcaag
agggatctggacgccagggctaaaagtgaacgctaccgcacgctgttccgcctaccgaaa
gacgagaagctggacggacacacagactgcacgctgtggacaccgttcaacaaaatgcac
atcttgggacaaatgttcgtctccaccaactacatctgcttcaccagtaaggaggagacc
gtgtgcagcctcattatcccactccgagaggtgactattgtggagaaggcagacagctcg
aatgtgttgcccagcccactatcaatcagcaccaagaaccgaatgaccttcctgttcgcc
aacctgaaagaccgcgacttcctggtgcagaggatctctgacttcttgcagcagacctcc
tccaagatctactttgagcgagagatcacaggcagcctcaccagctcagatgatgaggtg
tactcccagcacagtagtctgctctcctgtagtccacagcgcagcagtttgggctcagag
ggtgagagcgagcgccagttcaacctcaacgacaacagcgttcccacggcaacacaggcc
ctcatgaccatgtaccgccgccgttcgcctgaggagttcaaccccaaactggctaaggag
tttctgaaggagcaggcctggaagaatcactttgcggaattcggtcaaggtgtgtgtatg
taccgcacagagaagaccaaagagctggtgctcaaaggaatcccagagaacatgagagga
gacctgtggcttctgttctctggggcgattaatgagatggccactcacccgggctactat
gaagatttggtggagaagtcgatgggaaagtataatttagcaacagaagaaatcgagcgt
gaccttcaccgctcgctgcccgaacacccggcttttcagaacgagatgggcatcgctgca
ctgagacgcgtcctcaccgcgtatgccttccgcaatcccaacatcggctactgtcaggcg
atgaacattgtgacatcagtgttgctgctttatgctaaagaggaagaggctttctggcta
ttggtggcgctgtgtgagaggatgctcccagattactataacaccagagttgtgggtgcg
ttggtggatcagggagtgtttgaggagttggcccgtgtgcatgttcctcagctgtacgac
tgcatgcaggagctgggtgtgatctccaccatctctctgtcctggttcctcacactcttc
ctgtccgtcatgcccttcgagagcgcggtggtcgtggtcgactgcttcttctacgagggc
atcaagctcatctttcagctggcgctgtccgtgctggacgccaacatctaccagctgctc
aactgcaaggacgacggagaagccatgacggtgctcggcaggtatctagacagtgttacc
aataaggacagcaccttgcccccaatcccacacttgcactctctcctcaccgatgatgga
gagccccatcctgaggtggacatctttaaacttgtgcgcagctcatatgagaaattcggt
tctatccgggcggacgtgatcgaacagatgcgcttcaagcagaggctgagggtcatccag
actatagaggacacgactaaacgcaacgtggtccgtactatagttacagagacagcgttt
ggaatagatgagctggaagagcttttctcattatttaaggctgaacacctgaccagctgt
tactggggtggtacgagtaacccgatggaccgccatgacccgagtctgccctacctcgag
cagtatcgcatggacctggaacagtttaaggggctattctcggtgctcttttcatgggcc
agcggcacacacactgatggtctcgctgtgcgcttcttccgtctgcttgaccagaacgcg
gacgcgctcatcaacttccgagagttcattaatggacttggggtcctgtgccacggtgac
ctgactgagaagctaaagctcctctataagatgcacatattgccagatgtacatcatgag
caagatgagccagattcggcttttgaggccacgcagtacttctttgaggacatcacccct
gagacttccaacggccttgtccataagagcaggagcgagaaggacgatggatttgtcaga
gtcacattcaagaatgaaaaagtgaaaaaaatgcagacggcggattatcggatgtatttg
cgcctgtggaaccaggagaccaaatccaaaaccgagaacatgaaagatctccccaaactc
aaccagggtcagttcattgagctttgtaagacgctgtataacatgtttagcgaggacgct
aacgagcaggagctgtaccacgcgacagccacggtgaccagcctgctgctggagatgggg
gaggtgggaaagctcttctgcagcccctccagcaaagaggatgacgctgatgatgaggag
gaggatgaagacgaagagcatgcgactgcacgaaacaggaagcagcagaggattcagaag
caaacgttcatccgctcagtcgacgacaagatccctagcgcagcccctatggaggacatc
aagctggacgaatcacccaaagacacgggtgcctccacggccatgctcgtctccgacgac
gagaccaaagacgacacatcggtgtcctcgtactcggtgctaagcaccggctcgcacgag
atggacgagaagcttcaatgtgaggacatcgccgaggacacagtgctggtgcgcagtggt
gcaggagggaacgggatcccacacagcaccagtatcgataaggactgggctataaccttt
gagcagttcctggcctcggtgctcactgaacaagctttggtgcactacttcgagaaaccg
gtagacatcgtggaccgcatcgcgaacgccaagaacgtacgaaaggggggacagacgcat
acgtccgtcagcgattatgagatctcgctctcgggataa
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